RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 CCDC66A2RUB6 948 aa15.54■□□□□ 0.08
SNCA-204ENST00000394989 GABPB1Q06547 395 aaPredicted RBP15.54■□□□□ 0.08
SNCA-204ENST00000394989 LRRC41Q15345 812 aa15.54■□□□□ 0.08
SNCA-204ENST00000394989 MOXD1Q6UVY6 613 aa15.54■□□□□ 0.08
SNCA-204ENST00000394989 MRFAP1Q9Y605 127 aa15.54■□□□□ 0.08
SNCA-204ENST00000394989 MED24O75448 989 aa15.54■□□□□ 0.08
SNCA-204ENST00000394989 CARD6Q9BX69 1037 aa15.54■□□□□ 0.08
SNCA-204ENST00000394989 REXO2Q9Y3B8 237 aaKnown RBP15.54■□□□□ 0.08
SNCA-204ENST00000394989 HOXA13P31271 388 aaPredicted RBP15.53■□□□□ 0.08
SNCA-204ENST00000394989 SREBF1P36956 1147 aa15.53■□□□□ 0.08
SNCA-204ENST00000394989 TBC1D8BQ0IIM8 1120 aa15.53■□□□□ 0.08
SNCA-204ENST00000394989 COASYQ13057 564 aa15.53■□□□□ 0.08
SNCA-204ENST00000394989 PRR16Q569H4 304 aa15.53■□□□□ 0.08
SNCA-204ENST00000394989 OR8K1Q8NGG5 319 aa15.53■□□□□ 0.08
SNCA-204ENST00000394989 NOC4LQ9BVI4 516 aaKnown RBP15.53■□□□□ 0.08
SNCA-204ENST00000394989 NT5C3AQ9H0P0 336 aa15.53■□□□□ 0.08
SNCA-204ENST00000394989 LUC7L2Q9Y383 392 aaKnown RBP15.53■□□□□ 0.08
SNCA-204ENST00000394989 KIF13BQ9NQT8 1826 aa15.53■□□□□ 0.08
SNCA-204ENST00000394989 KDM3AQ9Y4C1 1321 aa15.53■□□□□ 0.08
SNCA-204ENST00000394989 ARHGAP25P42331 645 aa15.53■□□□□ 0.08
SNCA-204ENST00000394989 MTIF2P46199 727 aaKnown RBP15.53■□□□□ 0.08
SNCA-204ENST00000394989 LRRC55Q6ZSA7 311 aa15.53■□□□□ 0.08
SNCA-204ENST00000394989 FAM114A1Q8IWE2 563 aa15.53■□□□□ 0.08
SNCA-204ENST00000394989 RTKN2Q8IZC4 609 aa15.53■□□□□ 0.08
SNCA-204ENST00000394989 LARGE2Q8N3Y3 721 aa15.53■□□□□ 0.08
SNCA-204ENST00000394989 FAM151AQ8WW52 585 aa15.53■□□□□ 0.08
SNCA-204ENST00000394989 TADA3O75528 432 aa15.52■□□□□ 0.08
SNCA-204ENST00000394989 DPEP1P16444 411 aa15.52■□□□□ 0.08
SNCA-204ENST00000394989 DLGAP5Q15398 846 aa15.52■□□□□ 0.08
SNCA-204ENST00000394989 SPDYE2Q495Y8 402 aa15.52■□□□□ 0.08
SNCA-204ENST00000394989 Q4G0T1 1027 aa15.52■□□□□ 0.08
SNCA-204ENST00000394989 TAF3Q5VWG9 929 aa15.52■□□□□ 0.08
SNCA-204ENST00000394989 CYP2W1Q8TAV3 490 aa15.52■□□□□ 0.08
SNCA-204ENST00000394989 SLF1Q9BQI6 1058 aa15.52■□□□□ 0.08
SNCA-204ENST00000394989 PCDHA2Q9Y5H9 948 aa15.52■□□□□ 0.08
SNCA-204ENST00000394989 NPHP3-ACAD11A0A0J9YXS1 232 aa15.52■□□□□ 0.08
SNCA-204ENST00000394989 PSMD2Q13200 908 aa15.52■□□□□ 0.08
SNCA-204ENST00000394989 LRRC27Q9C0I9 530 aa15.52■□□□□ 0.08
SNCA-204ENST00000394989 SYNPO2Q9UMS6 1093 aa15.52■□□□□ 0.08
SNCA-204ENST00000394989 TMX2Q9Y320 296 aa15.52■□□□□ 0.08
SNCA-204ENST00000394989 PLA2G4BP0C869 781 aa15.52■□□□□ 0.07
SNCA-204ENST00000394989 STAT2P52630 851 aa15.52■□□□□ 0.07
SNCA-204ENST00000394989 MEA1Q16626 185 aa15.52■□□□□ 0.07
SNCA-204ENST00000394989 ZCWPW2Q504Y3 356 aa15.52■□□□□ 0.07
SNCA-204ENST00000394989 SLFN12Q8IYM2 578 aa15.52■□□□□ 0.07
SNCA-204ENST00000394989 ZNF397Q8NF99 534 aaPredicted RBP15.52■□□□□ 0.07
SNCA-204ENST00000394989 ERGIC2Q96RQ1 377 aa15.52■□□□□ 0.07
SNCA-204ENST00000394989 TMEM39BQ9GZU3 492 aa15.52■□□□□ 0.07
SNCA-204ENST00000394989 TMOD2Q9NZR1 351 aa15.52■□□□□ 0.07
SNCA-204ENST00000394989 ZBTB21Q9ULJ3 1066 aa15.52■□□□□ 0.07
SNCA-204ENST00000394989 POTEFA5A3E0 1075 aa15.51■□□□□ 0.07
SNCA-204ENST00000394989 NDUFA10O95299 355 aa15.51■□□□□ 0.07
SNCA-204ENST00000394989 POTEIP0CG38 1075 aa15.51■□□□□ 0.07
SNCA-204ENST00000394989 CACNB1Q02641 598 aaPredicted RBP15.51■□□□□ 0.07
SNCA-204ENST00000394989 LRRC63Q05C16 580 aa15.51■□□□□ 0.07
SNCA-204ENST00000394989 POTEGQ6S5H5 508 aa15.51■□□□□ 0.07
SNCA-204ENST00000394989 POTEEQ6S8J3 1075 aa15.51■□□□□ 0.07
SNCA-204ENST00000394989 CATSPER3Q86XQ3 398 aa15.51■□□□□ 0.07
SNCA-204ENST00000394989 PANK4Q9NVE7 773 aa15.51■□□□□ 0.07
SNCA-204ENST00000394989 EPN1Q9Y6I3 576 aaPredicted RBP15.51■□□□□ 0.07
SNCA-204ENST00000394989 SPDYE3A6NKU9 549 aa15.51■□□□□ 0.07
SNCA-204ENST00000394989 SSBP05455 408 aaKnown RBP eCLIP15.51■□□□□ 0.07
SNCA-204ENST00000394989 TRIM21P19474 475 aaKnown RBP15.51■□□□□ 0.07
SNCA-204ENST00000394989 GRIPAP1Q4V328 841 aa15.51■□□□□ 0.07
SNCA-204ENST00000394989 ARSHQ5FYA8 562 aa15.51■□□□□ 0.07
SNCA-204ENST00000394989 FAM83BQ5T0W9 1011 aa15.51■□□□□ 0.07
SNCA-204ENST00000394989 NEK11Q8NG66 645 aa15.51■□□□□ 0.07
SNCA-204ENST00000394989 SPATA31C1P0DKV0 1188 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 CYP11B2P19099 503 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 SLC12A3P55017 1021 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 PSMC6P62333 389 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 OGFOD1Q8N543 542 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 TBC1D5Q92609 795 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 PIK3CDO00329 1044 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 MSH4O15457 936 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 FOSP01100 380 aaPredicted RBP15.5■□□□□ 0.07
SNCA-204ENST00000394989 H2AFXP16104 143 aaPredicted RBP15.5■□□□□ 0.07
SNCA-204ENST00000394989 ERCC3P19447 782 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 CIITAP33076 1130 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 VWA3BQ502W6 1294 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 ZNF569Q5MCW4 686 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 MIGA2Q7L4E1 593 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 VEZTQ9HBM0 779 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 ARHGEF10LQ9HCE6 1279 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 TBC1D7Q9P0N9 293 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 TBX3O15119 743 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 EPHB6O15197 1021 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 KIF5CO60282 957 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 RAD51AP2Q09MP3 1159 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 ARHGAP29Q52LW3 1261 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 FAM26FQ5R3K3 315 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 DEFB132Q7Z7B7 95 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 GPBP1Q86WP2 473 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 RETREG2Q8NC44 543 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 EPC1Q9H2F5 836 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 NDST4Q9H3R1 872 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 TRIM10Q9UDY6 481 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 PGAP2Q9UHJ9 254 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 HDAC9Q9UKV0 1011 aa15.5■□□□□ 0.07
SNCA-204ENST00000394989 SIK3Q9Y2K2 1263 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms