RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 A0A1W2PQY0 241 aa22.73■■□□□ 1.23
SNCA-203ENST00000394986 SPATA31C2B4DYI2 1134 aa22.73■■□□□ 1.23
SNCA-203ENST00000394986 FIBPO43427 364 aa22.73■■□□□ 1.23
SNCA-203ENST00000394986 ICAM3P32942 547 aa22.73■■□□□ 1.23
SNCA-203ENST00000394986 GUCY1B3Q02153 619 aa22.73■■□□□ 1.23
SNCA-203ENST00000394986 NLRX1Q86UT6 975 aa22.73■■□□□ 1.23
SNCA-203ENST00000394986 FAM177A1Q8N128 213 aaPredicted RBP22.73■■□□□ 1.23
SNCA-203ENST00000394986 CRYGNQ8WXF5 182 aa22.73■■□□□ 1.23
SNCA-203ENST00000394986 PKD2L1Q9P0L9 805 aa22.73■■□□□ 1.23
SNCA-203ENST00000394986 GGPS1O95749 300 aa22.72■■□□□ 1.23
SNCA-203ENST00000394986 KRT40Q6A162 431 aa22.72■■□□□ 1.23
SNCA-203ENST00000394986 MCTP2Q6DN12 878 aa22.72■■□□□ 1.23
SNCA-203ENST00000394986 GALNT17Q6IS24 598 aa22.72■■□□□ 1.23
SNCA-203ENST00000394986 KCNV1Q6PIU1 500 aa22.72■■□□□ 1.23
SNCA-203ENST00000394986 PCSK9Q8NBP7 692 aaKnown RBP22.72■■□□□ 1.23
SNCA-203ENST00000394986 AFG1LQ8WV93 481 aa22.72■■□□□ 1.23
SNCA-203ENST00000394986 GPRASP2Q96D09 838 aa22.72■■□□□ 1.23
SNCA-203ENST00000394986 TSEN34Q9BSV6 310 aaKnown RBP22.72■■□□□ 1.23
SNCA-203ENST00000394986 JADE2Q9NQC1 790 aa22.72■■□□□ 1.23
SNCA-203ENST00000394986 KIAA1217Q5T5P2 1943 aa22.72■■□□□ 1.23
SNCA-203ENST00000394986 MOXD2PA6NHM9 499 aa22.71■■□□□ 1.23
SNCA-203ENST00000394986 FAM86B1E9PN63 330 aa22.71■■□□□ 1.23
SNCA-203ENST00000394986 FAM86B2P0C5J1 330 aa22.71■■□□□ 1.23
SNCA-203ENST00000394986 ZNF76P36508 570 aa22.71■■□□□ 1.23
SNCA-203ENST00000394986 HMGN5P82970 282 aaKnown RBP22.71■■□□□ 1.23
SNCA-203ENST00000394986 MTMR1Q13613 665 aa22.71■■□□□ 1.23
SNCA-203ENST00000394986 CELF3Q5SZQ8 465 aaKnown RBP22.71■■□□□ 1.23
SNCA-203ENST00000394986 CXCL17Q6UXB2 119 aa22.71■■□□□ 1.23
SNCA-203ENST00000394986 DHX37Q8IY37 1157 aaKnown RBP22.71■■□□□ 1.23
SNCA-203ENST00000394986 TBCKQ8TEA7 893 aa22.71■■□□□ 1.23
SNCA-203ENST00000394986 MXRA8Q9BRK3 442 aa22.71■■□□□ 1.23
SNCA-203ENST00000394986 EDIL3O43854 480 aa22.7■■□□□ 1.22
SNCA-203ENST00000394986 ATP9AO75110 1047 aa22.7■■□□□ 1.22
SNCA-203ENST00000394986 MYL3P08590 195 aa22.7■■□□□ 1.22
SNCA-203ENST00000394986 CYP3A4P08684 503 aa22.7■■□□□ 1.22
SNCA-203ENST00000394986 TGFB3P10600 412 aa22.7■■□□□ 1.22
SNCA-203ENST00000394986 CPT1AP50416 773 aa22.7■■□□□ 1.22
SNCA-203ENST00000394986 NR5A1Q13285 461 aa22.7■■□□□ 1.22
SNCA-203ENST00000394986 TRIM29Q14134 588 aa22.7■■□□□ 1.22
SNCA-203ENST00000394986 LRRC26Q2I0M4 334 aa22.7■■□□□ 1.22
SNCA-203ENST00000394986 CEP55Q53EZ4 464 aa22.7■■□□□ 1.22
SNCA-203ENST00000394986 MYSM1Q5VVJ2 828 aa22.7■■□□□ 1.22
SNCA-203ENST00000394986 FAM184AQ8NB25 1140 aa22.7■■□□□ 1.22
SNCA-203ENST00000394986 TELO2Q9Y4R8 837 aa22.7■■□□□ 1.22
SNCA-203ENST00000394986 A6NJR5 290 aa22.69■■□□□ 1.22
SNCA-203ENST00000394986 MMP1P03956 469 aa22.69■■□□□ 1.22
SNCA-203ENST00000394986 MMP3P08254 477 aa22.69■■□□□ 1.22
SNCA-203ENST00000394986 ARP10275 920 aa22.69■■□□□ 1.22
SNCA-203ENST00000394986 KRT2P35908 639 aa22.69■■□□□ 1.22
SNCA-203ENST00000394986 EARS2Q5JPH6 523 aaKnown RBP22.69■■□□□ 1.22
SNCA-203ENST00000394986 CYFIP1Q7L576 1253 aa22.69■■□□□ 1.22
SNCA-203ENST00000394986 C8orf76Q96K31 380 aa22.69■■□□□ 1.22
SNCA-203ENST00000394986 UIMC1Q96RL1 719 aa22.69■■□□□ 1.22
SNCA-203ENST00000394986 HTATIP2Q9BUP3 242 aa22.69■■□□□ 1.22
SNCA-203ENST00000394986 KCNH7Q9NS40 1196 aa22.69■■□□□ 1.22
SNCA-203ENST00000394986 FAM205CA6NFA0 338 aa22.68■■□□□ 1.22
SNCA-203ENST00000394986 ZEB2O60315 1214 aa22.68■■□□□ 1.22
SNCA-203ENST00000394986 KCNA2P16389 499 aa22.68■■□□□ 1.22
SNCA-203ENST00000394986 SP4Q02446 784 aa22.68■■□□□ 1.22
SNCA-203ENST00000394986 LAMC2Q13753 1193 aa22.68■■□□□ 1.22
SNCA-203ENST00000394986 NONOQ15233 471 aaKnown RBP eCLIP22.68■■□□□ 1.22
SNCA-203ENST00000394986 HSDL1Q3SXM5 330 aa22.68■■□□□ 1.22
SNCA-203ENST00000394986 SLC39A5Q6ZMH5 540 aa22.68■■□□□ 1.22
SNCA-203ENST00000394986 KRT25Q7Z3Z0 450 aa22.68■■□□□ 1.22
SNCA-203ENST00000394986 DIS3L2Q8IYB7 885 aaKnown RBP22.68■■□□□ 1.22
SNCA-203ENST00000394986 EMID1Q96A84 441 aaPredicted RBP22.68■■□□□ 1.22
SNCA-203ENST00000394986 SPATA33Q96N06 139 aa22.68■■□□□ 1.22
SNCA-203ENST00000394986 MLXIPQ9HAP2 919 aa22.68■■□□□ 1.22
SNCA-203ENST00000394986 STARD7Q9NQZ5 370 aa22.68■■□□□ 1.22
SNCA-203ENST00000394986 TNRC18O15417 2968 aaPredicted RBP22.67■■□□□ 1.22
SNCA-203ENST00000394986 IGLV3-22A0A075B6J6 115 aa22.67■■□□□ 1.22
SNCA-203ENST00000394986 MEIS1O00470 390 aa22.67■■□□□ 1.22
SNCA-203ENST00000394986 PSMC6P62333 389 aa22.67■■□□□ 1.22
SNCA-203ENST00000394986 INF2Q27J81 1249 aa22.67■■□□□ 1.22
SNCA-203ENST00000394986 PIK3AP1Q6ZUJ8 805 aa22.67■■□□□ 1.22
SNCA-203ENST00000394986 PLA2G4DQ86XP0 818 aa22.67■■□□□ 1.22
SNCA-203ENST00000394986 DPF3Q92784 378 aa22.67■■□□□ 1.22
SNCA-203ENST00000394986 TNFRSF25Q93038 417 aa22.67■■□□□ 1.22
SNCA-203ENST00000394986 VTI1AQ96AJ9 217 aa22.67■■□□□ 1.22
SNCA-203ENST00000394986 CDHR1Q96JP9 859 aa22.67■■□□□ 1.22
SNCA-203ENST00000394986 GLT1D1Q96MS3 346 aa22.67■■□□□ 1.22
SNCA-203ENST00000394986 CCDC194A0A1B0GVG4 234 aa22.66■■□□□ 1.22
SNCA-203ENST00000394986 BTBD18B2RXH4 712 aa22.66■■□□□ 1.22
SNCA-203ENST00000394986 GJB2P29033 226 aa22.66■■□□□ 1.22
SNCA-203ENST00000394986 PURAQ00577 322 aaKnown RBP22.66■■□□□ 1.22
SNCA-203ENST00000394986 NEDD9Q14511 834 aa22.66■■□□□ 1.22
SNCA-203ENST00000394986 METTL7BQ6UX53 244 aa22.66■■□□□ 1.22
SNCA-203ENST00000394986 PPTC7Q8NI37 304 aa22.66■■□□□ 1.22
SNCA-203ENST00000394986 PPP1R13LQ8WUF5 828 aa22.66■■□□□ 1.22
SNCA-203ENST00000394986 BRMS1Q9HCU9 246 aa22.66■■□□□ 1.22
SNCA-203ENST00000394986 PCDH10Q9P2E7 1040 aa22.66■■□□□ 1.22
SNCA-203ENST00000394986 CIITAP33076 1130 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 RTP1P59025 263 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 ITGB3BPQ13352 177 aaPredicted RBP22.65■■□□□ 1.22
SNCA-203ENST00000394986 TRIM60Q495X7 471 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 PRR16Q569H4 304 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 BRDTQ58F21 947 aaPredicted RBP22.65■■□□□ 1.22
SNCA-203ENST00000394986 C7orf61Q8IZ16 206 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 SENP7Q9BQF6 1050 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 AGO4Q9HCK5 861 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms