RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 TEX2Q8IWB9 1127 aa17.05■□□□□ 0.32
UBE2D3-207ENST00000394801 ETNPPLQ8TBG4 499 aa17.05■□□□□ 0.32
UBE2D3-207ENST00000394801 HERC5Q9UII4 1024 aaKnown RBP17.05■□□□□ 0.32
UBE2D3-207ENST00000394801 GH2P01242 217 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 KLK7P49862 253 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 KRT83P78385 493 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 GABPB1Q06547 395 aaPredicted RBP17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 SPIRE1Q08AE8 756 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 RRP1BQ14684 758 aaKnown RBP17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 SLC15A2Q16348 729 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 MYOCDQ8IZQ8 938 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 CEP112Q8N8E3 955 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 NAPGQ99747 312 aaPredicted RBP17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 PANK4Q9NVE7 773 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 ZNHIT6Q9NWK9 470 aaKnown RBP17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 KIAA1024Q9UPX6 916 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 SIK3Q9Y2K2 1263 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 ZRANB2O95218 330 aaKnown RBP eCLIP17.04■□□□□ 0.321e-7■■□□□ 13.8
UBE2D3-207ENST00000394801 CIITAP33076 1130 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 SREBF1P36956 1147 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 TUBB4BP68371 445 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 KIF4BQ2VIQ3 1234 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 GRIPAP1Q4V328 841 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 CCDC84Q86UT8 332 aaPredicted RBP17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 GOLGA1Q92805 767 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 CSRNP1Q96S65 589 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 PCDHA2Q9Y5H9 948 aa17.04■□□□□ 0.32
UBE2D3-207ENST00000394801 A0A1W2PRG0 241 aa17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 EIF3CLB5ME19 914 aaKnown RBP17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 E9PMD0 336 aa17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 PLA2G4BP0C869 781 aa17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 CYLC1P35663 651 aaPredicted RBP17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 HERVK_113P62684 666 aa17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 BMS1Q14692 1282 aaKnown RBP17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 FAM26FQ5R3K3 315 aa17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 GLIS3Q8NEA6 775 aa17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 EIF3CQ99613 913 aaKnown RBP17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 TSG101Q99816 390 aa17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 PLAGL2Q9UPG8 496 aa17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 PSME4Q14997 1843 aa17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 FRMD3A2A2Y4 597 aa17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 PPIP5K2O43314 1243 aa17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 LENG9Q96B70 501 aa17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 NHEJ1Q9H9Q4 299 aaPredicted RBP17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 PITPNM2Q9BZ72 1349 aa17.03■□□□□ 0.32
UBE2D3-207ENST00000394801 POTEB3A0JP26 581 aa17.02■□□□□ 0.32
UBE2D3-207ENST00000394801 POTECB2RU33 542 aa17.02■□□□□ 0.32
UBE2D3-207ENST00000394801 OPLAHO14841 1288 aa17.02■□□□□ 0.32
UBE2D3-207ENST00000394801 FKBP3Q00688 224 aaKnown RBP17.02■□□□□ 0.32
UBE2D3-207ENST00000394801 LRRC41Q15345 812 aa17.02■□□□□ 0.32
UBE2D3-207ENST00000394801 HAUS3Q68CZ6 603 aa17.02■□□□□ 0.32
UBE2D3-207ENST00000394801 POTEBQ6S5H4 581 aa17.02■□□□□ 0.32
UBE2D3-207ENST00000394801 CCDC65Q8IXS2 484 aa17.02■□□□□ 0.32
UBE2D3-207ENST00000394801 KRT222Q8N1A0 295 aa17.02■□□□□ 0.32
UBE2D3-207ENST00000394801 FAM20AQ96MK3 541 aa17.02■□□□□ 0.32
UBE2D3-207ENST00000394801 STK24Q9Y6E0 443 aa17.02■□□□□ 0.32
UBE2D3-207ENST00000394801 PIK3CDO00329 1044 aa17.02■□□□□ 0.31
UBE2D3-207ENST00000394801 PSMD14O00487 310 aa17.02■□□□□ 0.31
UBE2D3-207ENST00000394801 MED24O75448 989 aa17.02■□□□□ 0.31
UBE2D3-207ENST00000394801 CYP11B2P19099 503 aa17.02■□□□□ 0.31
UBE2D3-207ENST00000394801 RXRBP28702 533 aa17.02■□□□□ 0.31
UBE2D3-207ENST00000394801 SLC12A3P55017 1021 aa17.02■□□□□ 0.31
UBE2D3-207ENST00000394801 TAF3Q5VWG9 929 aa17.02■□□□□ 0.31
UBE2D3-207ENST00000394801 PCMTD1Q96MG8 357 aaPredicted RBP17.02■□□□□ 0.31
UBE2D3-207ENST00000394801 FHOD1Q9Y613 1164 aa17.02■□□□□ 0.31
UBE2D3-207ENST00000394801 SPDYE2BA6NHP3 402 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 SPDYE3A6NKU9 549 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 ATP8B1O43520 1251 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 CYP3A4P08684 503 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 SPDYE6P0CI01 402 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 CHMP4BP1P59074 171 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 SNAP25P60880 206 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 AMPD2Q01433 879 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 WHAMMP3Q1A5X7 153 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 PRR16Q569H4 304 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 TEX35Q5T0J7 233 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 TMCO3Q6UWJ1 677 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 EDEM3Q9BZQ6 932 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 FAM86B1E9PN63 330 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 FAM86B2P0C5J1 330 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 RPA1P27694 616 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 ARSHQ5FYA8 562 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 RSBN1LQ6PCB5 846 aaPredicted RBP17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 ARHGAP27Q6ZUM4 889 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 CATSPER3Q86XQ3 398 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 CEP63Q96MT8 703 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 GMLQ99445 158 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 PRR12Q9ULL5 1215 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 GUCA1BQ9UMX6 200 aa17.01■□□□□ 0.31
UBE2D3-207ENST00000394801 C21orf2O43822 256 aa17■□□□□ 0.31
UBE2D3-207ENST00000394801 STAT3P40763 770 aa17■□□□□ 0.31
UBE2D3-207ENST00000394801 MARSP56192 900 aaKnown RBP17■□□□□ 0.31
UBE2D3-207ENST00000394801 TRAF1Q13077 416 aa17■□□□□ 0.31
UBE2D3-207ENST00000394801 IKQ13123 557 aaPredicted RBP17■□□□□ 0.31
UBE2D3-207ENST00000394801 USH1GQ495M9 461 aa17■□□□□ 0.31
UBE2D3-207ENST00000394801 GPBP1Q86WP2 473 aa17■□□□□ 0.31
UBE2D3-207ENST00000394801 ERMNQ8TAM6 284 aa17■□□□□ 0.31
UBE2D3-207ENST00000394801 FAM151AQ8WW52 585 aa17■□□□□ 0.31
UBE2D3-207ENST00000394801 PARD6BQ9BYG5 372 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms