RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 TCEANC2Q96MN5 208 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 SELENONQ9NZV5 590 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 RFC4P35249 363 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 WASHC5Q12768 1159 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 NEK9Q8TD19 979 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 FANCEQ9HB96 536 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 METTL14Q9HCE5 456 aaKnown RBP14.43□□□□□ -0.1
USP49-203ENST00000394253 KLC1Q07866 573 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 NNTQ13423 1086 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 C17orf53Q8N3J3 647 aaPredicted RBP14.43□□□□□ -0.1
USP49-203ENST00000394253 TERB1Q8NA31 727 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 SLC52A1Q9NWF4 448 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 UBE4BO95155 1302 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 EMBQ6PCB8 327 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 BZW1Q7L1Q6 419 aaKnown RBP14.43□□□□□ -0.1
USP49-203ENST00000394253 CASP10Q92851 521 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 PTPN23Q9H3S7 1636 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 H7C1D1 291 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 KRT37O76014 449 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 KRT16P08779 473 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 JPH4Q96JJ6 628 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 LMCD1Q9NZU5 365 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 SUPT3HO75486 399 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 RPS6KB1P23443 525 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 GPTP24298 496 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 SOX6P35712 828 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 VCPP55072 806 aaKnown RBP14.43□□□□□ -0.1
USP49-203ENST00000394253 BTBD6Q96KE9 485 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 SLC12A6Q9UHW9 1150 aa14.43□□□□□ -0.1
USP49-203ENST00000394253 DRP2Q13474 957 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 KRT33BQ14525 404 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 EFTUD2Q15029 972 aaKnown RBP eCLIP14.42□□□□□ -0.1
USP49-203ENST00000394253 CENPUQ71F23 418 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 MAGEF1Q9HAY2 307 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.42□□□□□ -0.1
USP49-203ENST00000394253 BUB1O43683 1085 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 PLS3P13797 630 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 MYO1EQ12965 1108 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 BTNL9Q6UXG8 535 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 CCDC149Q6ZUS6 474 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 CDH24Q86UP0 819 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 REXO1Q8N1G1 1221 aaKnown RBP14.42□□□□□ -0.1
USP49-203ENST00000394253 LSG1Q9H089 658 aaKnown RBP14.42□□□□□ -0.1
USP49-203ENST00000394253 RRAGDQ9NQL2 400 aaPredicted RBP14.42□□□□□ -0.1
USP49-203ENST00000394253 GMEB1Q9Y692 573 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 EPN1Q9Y6I3 576 aaPredicted RBP14.42□□□□□ -0.1
USP49-203ENST00000394253 ASXL1Q8IXJ9 1541 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 HSPA4LO95757 839 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 GPBP1L1Q9HC44 474 aaPredicted RBP14.42□□□□□ -0.1
USP49-203ENST00000394253 CPSF3Q9UKF6 684 aaKnown RBP14.42□□□□□ -0.1
USP49-203ENST00000394253 TDRD9Q8NDG6 1382 aaKnown RBP14.42□□□□□ -0.1
USP49-203ENST00000394253 ASAP2O43150 1006 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 ADNPQ9H2P0 1102 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 EPB41L5Q9HCM4 733 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 TBK1Q9UHD2 729 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 H0Y3Z8 333 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 LDHBP07195 334 aaKnown RBP14.42□□□□□ -0.1
USP49-203ENST00000394253 NLRC4Q9NPP4 1024 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 ARL2BPQ9Y2Y0 163 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 CITO14578 2027 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 PIK3CAP42336 1068 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 UBE3AQ05086 875 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 EHHADHQ08426 723 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 KCNA1Q09470 495 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 PIK3AP1Q6ZUJ8 805 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 FGD2Q7Z6J4 655 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 PARP9Q8IXQ6 854 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 FIS1Q9Y3D6 152 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 SMARCA1P28370 1054 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 RASSF7Q02833 373 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 RRM2BQ7LG56 351 aa14.42□□□□□ -0.1
USP49-203ENST00000394253 PI4KAP2A4QPH2 592 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 PI4KAP1Q8N8J0 262 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 CALR3Q96L12 384 aaKnown RBP14.41□□□□□ -0.1
USP49-203ENST00000394253 TBC1D7Q9P0N9 293 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 CCDC61Q9Y6R9 512 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 TRIM13O60858 407 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 PSMD2Q13200 908 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 RETREG2Q8NC44 543 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 USE1Q9NZ43 259 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 ZNF839A8K0R7 811 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 SKAP1Q86WV1 359 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 GINS2Q9Y248 185 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 KIF21AQ7Z4S6 1674 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 GOLGA8MH3BSY2 632 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 SPOUT1Q5T280 376 aaKnown RBP14.41□□□□□ -0.1
USP49-203ENST00000394253 PDIK1LQ8N165 341 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 SCG3Q8WXD2 468 aaKnown RBP14.41□□□□□ -0.1
USP49-203ENST00000394253 PPARGC1AQ9UBK2 798 aaKnown RBP14.41□□□□□ -0.1
USP49-203ENST00000394253 TK2O00142 265 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 GRK2P25098 689 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 TRIM16LQ309B1 348 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 ANKRD13DQ6ZTN6 518 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 TRIM69Q86WT6 500 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 ABCF3Q9NUQ8 709 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 SBNO1A3KN83 1393 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 ANP32DO95626 131 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 SNAP25P60880 206 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 CYP4F22Q6NT55 531 aa14.41□□□□□ -0.1
USP49-203ENST00000394253 KIAA1468Q9P260 1216 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms