RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 SLC30A9Q6PML9 568 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 USP49Q70CQ1 688 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 IRF2BP1Q8IU81 584 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 SMCR8Q8TEV9 937 aaPredicted RBP23.96■■□□□ 1.43
CLDND1-202ENST00000394180 PARD3BQ8TEW8 1205 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 EPB41L5Q9HCM4 733 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 KCNMB3Q9NPA1 279 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 RBM12Q9NTZ6 932 aaKnown RBP23.96■■□□□ 1.43
CLDND1-202ENST00000394180 SLC5A4Q9NY91 659 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 H0YGN5 161 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 OPLAHO14841 1288 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 DEXIO95424 95 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 MYBP10242 640 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 CTDSPL2Q05D32 466 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 QPCTQ16769 361 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 FAM43BQ6ZT52 329 aaPredicted RBP23.96■■□□□ 1.43
CLDND1-202ENST00000394180 RAB11FIP4Q86YS3 637 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 IGDCC4Q8TDY8 1250 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 RAPGEF5Q92565 580 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 UPF1Q92900 1129 aaKnown RBP eCLIP23.96■■□□□ 1.43
CLDND1-202ENST00000394180 MTA3Q9BTC8 594 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.96■■□□□ 1.43
CLDND1-202ENST00000394180 NFS1Q9Y697 457 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 SKAP2O75563 359 aaPredicted RBP23.95■■□□□ 1.42
CLDND1-202ENST00000394180 FAM153BP0C7A2 387 aa23.95■■□□□ 1.42
CLDND1-202ENST00000394180 ROR2Q01974 943 aaKnown RBP23.95■■□□□ 1.42
CLDND1-202ENST00000394180 FAM153CQ494X1 144 aa23.95■■□□□ 1.42
CLDND1-202ENST00000394180 SPDYCQ5MJ68 293 aa23.95■■□□□ 1.42
CLDND1-202ENST00000394180 MAATS1Q7Z4T9 603 aa23.95■■□□□ 1.42
CLDND1-202ENST00000394180 CCDC42Q96M95 316 aa23.95■■□□□ 1.42
CLDND1-202ENST00000394180 SLC26A6Q9BXS9 759 aa23.95■■□□□ 1.42
CLDND1-202ENST00000394180 FAM153AQ9UHL3 310 aa23.95■■□□□ 1.42
CLDND1-202ENST00000394180 RTL9Q8NET4 1388 aa23.95■■□□□ 1.42
CLDND1-202ENST00000394180 GCLCP48506 637 aaPredicted RBP23.95■■□□□ 1.42
CLDND1-202ENST00000394180 PPARAQ07869 468 aa23.95■■□□□ 1.42
CLDND1-202ENST00000394180 CMPK2Q5EBM0 449 aa23.95■■□□□ 1.42
CLDND1-202ENST00000394180 CWF19L1Q69YN2 538 aaKnown RBP23.95■■□□□ 1.42
CLDND1-202ENST00000394180 CPLX4Q7Z7G2 160 aa23.95■■□□□ 1.42
CLDND1-202ENST00000394180 HELBQ8NG08 1087 aaPredicted RBP23.95■■□□□ 1.42
CLDND1-202ENST00000394180 CELF1Q92879 486 aaKnown RBP23.95■■□□□ 1.42
CLDND1-202ENST00000394180 THOC1Q96FV9 657 aaKnown RBP23.95■■□□□ 1.42
CLDND1-202ENST00000394180 ISCUQ9H1K1 167 aa23.95■■□□□ 1.42
CLDND1-202ENST00000394180 CEP126Q9P2H0 1117 aa23.95■■□□□ 1.42
CLDND1-202ENST00000394180 PCDHA13Q9Y5I0 950 aa23.95■■□□□ 1.42
CLDND1-202ENST00000394180 CAPN6Q9Y6Q1 641 aa23.95■■□□□ 1.42
CLDND1-202ENST00000394180 RIC1Q4ADV7 1423 aa23.94■■□□□ 1.42
CLDND1-202ENST00000394180 CES2O00748 559 aa23.94■■□□□ 1.42
CLDND1-202ENST00000394180 CCDC96Q2M329 555 aa23.94■■□□□ 1.42
CLDND1-202ENST00000394180 METTL24Q5JXM2 366 aa23.94■■□□□ 1.42
CLDND1-202ENST00000394180 SMYD4Q8IYR2 804 aaPredicted RBP23.94■■□□□ 1.42
CLDND1-202ENST00000394180 IFIH1Q9BYX4 1025 aaKnown RBP23.94■■□□□ 1.42
CLDND1-202ENST00000394180 EXOC1Q9NV70 894 aa23.94■■□□□ 1.42
CLDND1-202ENST00000394180 SRCAPQ6ZRS2 3230 aa23.94■■□□□ 1.42
CLDND1-202ENST00000394180 SYMPKQ92797 1274 aaKnown RBP23.94■■□□□ 1.42
CLDND1-202ENST00000394180 CHMP6Q96FZ7 201 aa23.94■■□□□ 1.42
CLDND1-202ENST00000394180 NEUROD6Q96NK8 337 aa23.94■■□□□ 1.42
CLDND1-202ENST00000394180 PAIP2Q9BPZ3 127 aaKnown RBP23.94■■□□□ 1.42
CLDND1-202ENST00000394180 MAGEC2Q9UBF1 373 aaPredicted RBP23.94■■□□□ 1.42
CLDND1-202ENST00000394180 LRWD1Q9UFC0 647 aa23.94■■□□□ 1.42
CLDND1-202ENST00000394180 FBXO3Q9UK99 471 aa23.94■■□□□ 1.42
CLDND1-202ENST00000394180 XDHP47989 1333 aa23.93■■□□□ 1.42
CLDND1-202ENST00000394180 IBSPP21815 317 aaPredicted RBP23.93■■□□□ 1.42
CLDND1-202ENST00000394180 GUCY2DQ02846 1103 aa23.93■■□□□ 1.42
CLDND1-202ENST00000394180 ZNF570Q96NI8 536 aa23.93■■□□□ 1.42
CLDND1-202ENST00000394180 ERGIC2Q96RQ1 377 aa23.93■■□□□ 1.42
CLDND1-202ENST00000394180 LY9Q9HBG7 655 aa23.93■■□□□ 1.42
CLDND1-202ENST00000394180 TFR2Q9UP52 801 aa23.93■■□□□ 1.42
CLDND1-202ENST00000394180 DUSP10Q9Y6W6 482 aa23.93■■□□□ 1.42
CLDND1-202ENST00000394180 BHMG1C9JSJ3 638 aaPredicted RBP23.92■■□□□ 1.42
CLDND1-202ENST00000394180 IGHMBP2P38935 993 aaKnown RBP23.92■■□□□ 1.42
CLDND1-202ENST00000394180 NFRKBQ6P4R8 1299 aa23.92■■□□□ 1.42
CLDND1-202ENST00000394180 CYB5R4Q7L1T6 521 aa23.92■■□□□ 1.42
CLDND1-202ENST00000394180 KIRREL3Q8IZU9 778 aa23.92■■□□□ 1.42
CLDND1-202ENST00000394180 ADSSL1Q8N142 457 aa23.92■■□□□ 1.42
CLDND1-202ENST00000394180 TBC1D31Q96DN5 1066 aa23.92■■□□□ 1.42
CLDND1-202ENST00000394180 ZBTB10Q96DT7 871 aa23.92■■□□□ 1.42
CLDND1-202ENST00000394180 PLAGL2Q9UPG8 496 aa23.92■■□□□ 1.42
CLDND1-202ENST00000394180 MYH13Q9UKX3 1938 aa23.92■■□□□ 1.42
CLDND1-202ENST00000394180 SNAP23O00161 211 aa23.92■■□□□ 1.42
CLDND1-202ENST00000394180 TRIM21P19474 475 aaKnown RBP23.92■■□□□ 1.42
CLDND1-202ENST00000394180 ARHGAP27Q6ZUM4 889 aa23.92■■□□□ 1.42
CLDND1-202ENST00000394180 MICU3Q86XE3 530 aa23.92■■□□□ 1.42
CLDND1-202ENST00000394180 CASKIN2Q8WXE0 1202 aa23.92■■□□□ 1.42
CLDND1-202ENST00000394180 TLR10Q9BXR5 811 aa23.92■■□□□ 1.42
CLDND1-202ENST00000394180 STXBP3O00186 592 aa23.91■■□□□ 1.42
CLDND1-202ENST00000394180 MYL1P05976 194 aa23.91■■□□□ 1.42
CLDND1-202ENST00000394180 HPDP32754 393 aaPredicted RBP23.91■■□□□ 1.42
CLDND1-202ENST00000394180 MATR3P43243 847 aaKnown RBP eCLIP23.91■■□□□ 1.42
CLDND1-202ENST00000394180 TNNC1P63316 161 aa23.91■■□□□ 1.42
CLDND1-202ENST00000394180 ERMARDQ5T6L9 678 aa23.91■■□□□ 1.42
CLDND1-202ENST00000394180 EPSTI1Q96J88 318 aa23.91■■□□□ 1.42
CLDND1-202ENST00000394180 PCDHGC5Q9Y5F6 944 aa23.91■■□□□ 1.42
CLDND1-202ENST00000394180 LRP5O75197 1615 aa23.91■■□□□ 1.42
CLDND1-202ENST00000394180 AP1G2O75843 785 aa23.91■■□□□ 1.42
CLDND1-202ENST00000394180 PEX19P40855 299 aa23.91■■□□□ 1.42
CLDND1-202ENST00000394180 PAPOLAP51003 745 aaKnown RBP23.91■■□□□ 1.42
CLDND1-202ENST00000394180 PDXDC2PQ6P474 469 aa23.91■■□□□ 1.42
CLDND1-202ENST00000394180 SLC51AQ86UW1 340 aa23.91■■□□□ 1.42
CLDND1-202ENST00000394180 FAM114A1Q8IWE2 563 aa23.91■■□□□ 1.42
CLDND1-202ENST00000394180 VGLL2Q8N8G2 317 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms