RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 RAD51CO43502 376 aa12.96□□□□□ -0.34
R3HDM2-203ENST00000393811 VIMP08670 466 aaKnown RBP12.96□□□□□ -0.34
R3HDM2-203ENST00000393811 PTGISQ16647 500 aa12.96□□□□□ -0.34
R3HDM2-203ENST00000393811 GKAP1Q5VSY0 366 aaPredicted RBP12.96□□□□□ -0.34
R3HDM2-203ENST00000393811 CCDC65Q8IXS2 484 aa12.96□□□□□ -0.34
R3HDM2-203ENST00000393811 RNF10Q8N5U6 811 aaKnown RBP12.96□□□□□ -0.34
R3HDM2-203ENST00000393811 CASKIN2Q8WXE0 1202 aa12.96□□□□□ -0.34
R3HDM2-203ENST00000393811 KLC4Q9NSK0 619 aa12.96□□□□□ -0.34
R3HDM2-203ENST00000393811 PANK4Q9NVE7 773 aa12.96□□□□□ -0.34
R3HDM2-203ENST00000393811 TMEM260Q9NX78 707 aa12.96□□□□□ -0.34
R3HDM2-203ENST00000393811 ODF2LQ9ULJ1 636 aa12.96□□□□□ -0.34
R3HDM2-203ENST00000393811 FRMPD2Q68DX3 1309 aaPredicted RBP12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 SPEF2Q9C093 1822 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 MYMKA6NI61 221 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 HGSO14964 777 aaPredicted RBP12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 CETN3O15182 167 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 SHOX2O60902 331 aaPredicted RBP12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 RPSAP08865 295 aaKnown RBP12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 NKX1-1Q15270 411 aaPredicted RBP12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 PPP1R7Q15435 360 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 SNCBQ16143 134 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 UNC13DQ70J99 1090 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 ZNF34Q8IZ26 560 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 TBC1D31Q96DN5 1066 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 PIGSQ96S52 555 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 SH3GLB2Q9NR46 395 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 UTP11Q9Y3A2 253 aaKnown RBP12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 ORC4O43929 436 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 CLNS1AP54105 237 aaKnown RBP12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 IKQ13123 557 aaPredicted RBP12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 KLHDC7AQ5VTJ3 777 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 ANKS4BQ8N8V4 417 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 MYCBPAPQ8TBZ2 947 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 ATP8A1Q9Y2Q0 1164 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 PRLRP16471 622 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 CRKLP46109 303 aaKnown RBP12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 MAP2K1Q02750 393 aaPredicted RBP12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 DHX9Q08211 1270 aaKnown RBP12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 ADAM9Q13443 819 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 MIIPQ5JXC2 388 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 DGKHQ86XP1 1220 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 COA7Q96BR5 231 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 FAM84BQ96KN1 310 aaPredicted RBP12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 NLRP3Q96P20 1036 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 C7orf25Q9BPX7 421 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 BARHL2Q9NY43 387 aa12.95□□□□□ -0.34
R3HDM2-203ENST00000393811 GMNCA6NCL1 334 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 LRRC63Q05C16 580 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 TRADDQ15628 312 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 DNAAF5Q86Y56 855 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 KIAA0895Q8NCT3 520 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 LMBR1Q8WVP7 490 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 N4BP2L2Q92802 583 aaPredicted RBP12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 EYA3Q99504 573 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 TAF1DQ9H5J8 278 aaPredicted RBP12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 NWD2Q9ULI1 1742 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 MPHOSPH10O00566 681 aaKnown RBP12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 NEDD9Q14511 834 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 DIXDC1Q155Q3 683 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 ERFEQ4G0M1 354 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 KDM7AQ6ZMT4 941 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 TMEM47Q9BQJ4 181 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 MYH10P35580 1976 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 ZNF233A6NK53 670 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 ADAMTS2O95450 1211 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 CPP00450 1065 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 ABCB4P21439 1286 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 FIGNQ5HY92 759 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 TMED8Q6PL24 325 aaPredicted RBP12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 CCDC25Q86WR0 208 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 U2AF1L4Q8WU68 220 aaKnown RBP12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 CAVIN3Q969G5 261 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 NSUN4Q96CB9 384 aaKnown RBP12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 SALL4Q9UJQ4 1053 aa12.94□□□□□ -0.34
R3HDM2-203ENST00000393811 TMEM110-MUSTN1A8MSY1 372 aa12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 ADCY7P51828 1080 aa12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 MAGOHP61326 146 aaKnown RBP12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 CDK17Q00537 523 aa12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 MTMR3Q13615 1198 aa12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 GUF1Q8N442 669 aaKnown RBP12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 RUBCNQ92622 972 aa12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 MAGOHBQ96A72 148 aaKnown RBP12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 SH3GL2Q99962 352 aa12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 CEP72Q9P209 647 aa12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 GOLGA6L10A0A0M3HER8 536 aa12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 PGRMC1O00264 195 aaKnown RBP12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 NKRFO15226 690 aaKnown RBP eCLIP12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 CTNND1O60716 968 aaKnown RBP12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 RPS8P62241 208 aaKnown RBP12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 SKOR1P84550 965 aa12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 NBPF5PQ86XG9 351 aaPredicted RBP12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 PACSIN1Q9BY11 444 aa12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 TTYH3Q9C0H2 523 aa12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 RIC8AQ9NPQ8 531 aa12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 FBXL5Q9UKA1 691 aa12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 ATP6V0A2Q9Y487 856 aa12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 FLOT1O75955 427 aa12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 ECM2O94769 699 aaPredicted RBP12.93□□□□□ -0.34
R3HDM2-203ENST00000393811 LDHCP07864 332 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms