RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 IL25Q9H293 177 aa21.6■■□□□ 1.05
SNCB-202ENST00000393693 SGSM2O43147 1006 aa21.59■■□□□ 1.05
SNCB-202ENST00000393693 LPXNO60711 386 aa21.59■■□□□ 1.05
SNCB-202ENST00000393693 PPP1R11O60927 126 aaPredicted RBP21.59■■□□□ 1.05
SNCB-202ENST00000393693 MFSD10Q14728 455 aa21.59■■□□□ 1.05
SNCB-202ENST00000393693 DHX37Q8IY37 1157 aaKnown RBP21.59■■□□□ 1.05
SNCB-202ENST00000393693 EMID1Q96A84 441 aaPredicted RBP21.59■■□□□ 1.05
SNCB-202ENST00000393693 USP26Q9BXU7 913 aa21.59■■□□□ 1.05
SNCB-202ENST00000393693 KRT23Q9C075 422 aa21.59■■□□□ 1.05
SNCB-202ENST00000393693 TRIP12Q14669 1992 aaPredicted RBP21.59■■□□□ 1.05
SNCB-202ENST00000393693 LAMA4Q16363 1823 aa21.59■■□□□ 1.05
SNCB-202ENST00000393693 RGS20O76081 388 aa21.58■■□□□ 1.05
SNCB-202ENST00000393693 CXCL10P02778 98 aa21.58■■□□□ 1.05
SNCB-202ENST00000393693 MYCLP12524 364 aaPredicted RBP21.58■■□□□ 1.05
SNCB-202ENST00000393693 HSD17B4P51659 736 aa21.58■■□□□ 1.05
SNCB-202ENST00000393693 RBL2Q08999 1139 aa21.58■■□□□ 1.05
SNCB-202ENST00000393693 LAMC2Q13753 1193 aa21.58■■□□□ 1.05
SNCB-202ENST00000393693 HIC1Q14526 733 aa21.58■■□□□ 1.05
SNCB-202ENST00000393693 KIAA0753Q2KHM9 967 aa21.58■■□□□ 1.05
SNCB-202ENST00000393693 AAK1Q2M2I8 961 aa21.58■■□□□ 1.05
SNCB-202ENST00000393693 IFIT1BQ5T764 474 aaKnown RBP21.58■■□□□ 1.05
SNCB-202ENST00000393693 CNKSR3Q6P9H4 555 aa21.58■■□□□ 1.05
SNCB-202ENST00000393693 CYB5R4Q7L1T6 521 aa21.58■■□□□ 1.05
SNCB-202ENST00000393693 ZFP91Q96JP5 570 aaPredicted RBP21.58■■□□□ 1.05
SNCB-202ENST00000393693 PDCD2LQ9BRP1 358 aa21.58■■□□□ 1.05
SNCB-202ENST00000393693 UBAC1Q9BSL1 405 aa21.58■■□□□ 1.05
SNCB-202ENST00000393693 ZBED2Q9BTP6 218 aa21.58■■□□□ 1.05
SNCB-202ENST00000393693 AMNQ9BXJ7 453 aa21.58■■□□□ 1.05
SNCB-202ENST00000393693 ANO2Q9NQ90 1003 aa21.58■■□□□ 1.05
SNCB-202ENST00000393693 PTPRSQ13332 1948 aa21.57■■□□□ 1.04
SNCB-202ENST00000393693 KLRF2D3W0D1 207 aa21.57■■□□□ 1.04
SNCB-202ENST00000393693 HAS3O00219 553 aa21.57■■□□□ 1.04
SNCB-202ENST00000393693 F2P00734 622 aa21.57■■□□□ 1.04
SNCB-202ENST00000393693 HOXA13P31271 388 aaPredicted RBP21.57■■□□□ 1.04
SNCB-202ENST00000393693 TRIM71Q2Q1W2 868 aaKnown RBP21.57■■□□□ 1.04
SNCB-202ENST00000393693 ZNF618Q5T7W0 954 aa21.57■■□□□ 1.04
SNCB-202ENST00000393693 TRAF7Q6Q0C0 670 aa21.57■■□□□ 1.04
SNCB-202ENST00000393693 PPTC7Q8NI37 304 aa21.57■■□□□ 1.04
SNCB-202ENST00000393693 CTNNA3Q9UI47 895 aa21.57■■□□□ 1.04
SNCB-202ENST00000393693 MAD2L2Q9UI95 211 aa21.57■■□□□ 1.04
SNCB-202ENST00000393693 PTK7Q13308 1070 aa21.56■■□□□ 1.04
SNCB-202ENST00000393693 MBTPS1Q14703 1052 aa21.56■■□□□ 1.04
SNCB-202ENST00000393693 SEC23AQ15436 765 aa21.56■■□□□ 1.04
SNCB-202ENST00000393693 SLC35G1Q2M3R5 365 aa21.56■■□□□ 1.04
SNCB-202ENST00000393693 IL31RAQ8NI17 732 aa21.56■■□□□ 1.04
SNCB-202ENST00000393693 GDPD5Q8WTR4 605 aa21.56■■□□□ 1.04
SNCB-202ENST00000393693 MTMR8Q96EF0 704 aa21.56■■□□□ 1.04
SNCB-202ENST00000393693 KATNAL1Q9BW62 490 aa21.56■■□□□ 1.04
SNCB-202ENST00000393693 MTUS1Q9ULD2 1270 aa21.56■■□□□ 1.04
SNCB-202ENST00000393693 KIAA1217Q5T5P2 1943 aa21.56■■□□□ 1.04
SNCB-202ENST00000393693 BDP1A6H8Y1 2624 aa21.55■■□□□ 1.04
SNCB-202ENST00000393693 ZBTB5O15062 677 aa21.55■■□□□ 1.04
SNCB-202ENST00000393693 SP2Q02086 613 aa21.55■■□□□ 1.04
SNCB-202ENST00000393693 GHRHRQ02643 423 aa21.55■■□□□ 1.04
SNCB-202ENST00000393693 HSDL1Q3SXM5 330 aa21.55■■□□□ 1.04
SNCB-202ENST00000393693 MYSM1Q5VVJ2 828 aa21.55■■□□□ 1.04
SNCB-202ENST00000393693 FAM117BQ6P1L5 589 aa21.55■■□□□ 1.04
SNCB-202ENST00000393693 STOX1Q6ZVD7 989 aa21.55■■□□□ 1.04
SNCB-202ENST00000393693 GPKOWQ92917 476 aaPredicted RBP eCLIP21.55■■□□□ 1.04
SNCB-202ENST00000393693 IPO9Q96P70 1041 aaKnown RBP21.55■■□□□ 1.04
SNCB-202ENST00000393693 CNNM2Q9H8M5 875 aa21.55■■□□□ 1.04
SNCB-202ENST00000393693 COG5Q9UP83 839 aa21.55■■□□□ 1.04
SNCB-202ENST00000393693 PCDHA1Q9Y5I3 950 aa21.55■■□□□ 1.04
SNCB-202ENST00000393693 GJB5O95377 273 aa21.54■■□□□ 1.04
SNCB-202ENST00000393693 PARNO95453 639 aaKnown RBP21.54■■□□□ 1.04
SNCB-202ENST00000393693 GGPS1O95749 300 aa21.54■■□□□ 1.04
SNCB-202ENST00000393693 PGM5Q15124 567 aa21.54■■□□□ 1.04
SNCB-202ENST00000393693 CELF3Q5SZQ8 465 aaKnown RBP21.54■■□□□ 1.04
SNCB-202ENST00000393693 VSIG10LQ86VR7 867 aa21.54■■□□□ 1.04
SNCB-202ENST00000393693 HOMER1Q86YM7 354 aa21.54■■□□□ 1.04
SNCB-202ENST00000393693 HLA-CQ95604 372 aa21.54■■□□□ 1.04
SNCB-202ENST00000393693 SPATA33Q96N06 139 aa21.54■■□□□ 1.04
SNCB-202ENST00000393693 BCAS3Q9H6U6 928 aa21.54■■□□□ 1.04
SNCB-202ENST00000393693 ABHD14A-ACY1A0A1B0GW23 586 aa21.53■■□□□ 1.04
SNCB-202ENST00000393693 PALM3A6NDB9 673 aaPredicted RBP21.53■■□□□ 1.04
SNCB-202ENST00000393693 PPFIA4O75335 1185 aa21.53■■□□□ 1.04
SNCB-202ENST00000393693 HOXD8P13378 290 aaPredicted RBP21.53■■□□□ 1.04
SNCB-202ENST00000393693 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.53■■□□□ 1.04
SNCB-202ENST00000393693 PIGSQ96S52 555 aa21.53■■□□□ 1.04
SNCB-202ENST00000393693 RAD9AQ99638 391 aa21.53■■□□□ 1.04
SNCB-202ENST00000393693 SUGCTQ9HAC7 445 aa21.53■■□□□ 1.04
SNCB-202ENST00000393693 SENP2Q9HC62 589 aa21.53■■□□□ 1.04
SNCB-202ENST00000393693 DAXXQ9UER7 740 aaPredicted RBP21.53■■□□□ 1.04
SNCB-202ENST00000393693 UBA1P22314 1058 aaKnown RBP21.52■■□□□ 1.04
SNCB-202ENST00000393693 IKBKEQ14164 716 aa21.52■■□□□ 1.04
SNCB-202ENST00000393693 BECN1Q14457 450 aa21.52■■□□□ 1.04
SNCB-202ENST00000393693 FCHSD1Q86WN1 690 aa21.52■■□□□ 1.04
SNCB-202ENST00000393693 C16orf70Q9BSU1 422 aa21.52■■□□□ 1.04
SNCB-202ENST00000393693 MYH6P13533 1939 aa21.52■■□□□ 1.04
SNCB-202ENST00000393693 NCOR1O75376 2440 aa21.51■■□□□ 1.03
SNCB-202ENST00000393693 COL4A4P53420 1690 aaPredicted RBP21.51■■□□□ 1.03
SNCB-202ENST00000393693 LINC01553A4QN01 128 aa21.51■■□□□ 1.03
SNCB-202ENST00000393693 ERVK-21P61565 698 aa21.51■■□□□ 1.03
SNCB-202ENST00000393693 KCNV1Q6PIU1 500 aa21.51■■□□□ 1.03
SNCB-202ENST00000393693 EPHX3Q9H6B9 360 aa21.51■■□□□ 1.03
SNCB-202ENST00000393693 MAP3K20Q9NYL2 800 aaKnown RBP21.51■■□□□ 1.03
SNCB-202ENST00000393693 GCOM1H8Y6P7 765 aaPredicted RBP21.5■■□□□ 1.03
SNCB-202ENST00000393693 LGR5O75473 907 aa21.5■■□□□ 1.03
SNCB-202ENST00000393693 POLR2MP0CAP2 368 aa21.5■■□□□ 1.03
SNCB-202ENST00000393693 THPOP40225 353 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms