RNA–Protein interactions for RNA: ENST00000393330.6

TSPAN8-202, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-202ENST00000393330 EDN3P14138 238 aa6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 HCLS1P14317 486 aaPredicted RBP6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 EPHA1P21709 976 aa6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 KCNQ1P51787 676 aa6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 FAM117BQ6P1L5 589 aa6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 KRBA2Q6ZNG9 492 aa6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 MAP4K3Q8IVH8 894 aa6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 GALNT11Q8NCW6 608 aa6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 WFDC12Q8WWY7 111 aa6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 PHACTR3Q96KR7 559 aa6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 RNPC3Q96LT9 517 aaKnown RBP6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 PARK7Q99497 189 aaKnown RBP6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 PRRX2Q99811 253 aa6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 ZKSCAN3Q9BRR0 538 aa6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 TSPYL1Q9H0U9 437 aa6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 LATS2Q9NRM7 1088 aa6.2□□□□□ -1.42
TSPAN8-202ENST00000393330 ALPK3Q96L96 1907 aa6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 CDH23Q9H251 3354 aa6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 KCNQ3O43525 872 aa6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 ALX3O95076 343 aa6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 NOS3P29474 1203 aa6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 RPS8P62241 208 aaKnown RBP6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 TFF2Q03403 129 aa6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 TNFAIP1Q13829 316 aa6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 VGLL4Q14135 290 aa6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 DACT2Q5SW24 774 aa6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 ASAP3Q8TDY4 903 aa6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 MFSD14AQ96MC6 490 aa6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 ADAM19Q9H013 955 aa6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 MRPL18Q9H0U6 180 aaKnown RBP6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 PRDM12Q9H4Q4 367 aa6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 SRA1Q9HD15 236 aaKnown RBP6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 CEP83Q9Y592 693 aa6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 LAMB1P07942 1786 aa6.19□□□□□ -1.42
TSPAN8-202ENST00000393330 SPTBN4Q9H254 2564 aa6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 SH3TC1Q8TE82 1336 aa6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 FSCN2O14926 492 aa6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 DHX16O60231 1041 aaKnown RBP6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 PRKAR2BP31323 418 aa6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 CD68P34810 354 aaPredicted RBP6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 ID4P47928 161 aa6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 PPIL2Q13356 520 aa6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 RASA3Q14644 834 aa6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 CCDC144BQ3MJ40 725 aa6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 TMEM102Q8N9M5 508 aaPredicted RBP6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 SLC7A3Q8WY07 619 aa6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 CELF1Q92879 486 aaKnown RBP6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 NXPE3Q969Y0 559 aa6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 TP53INP1Q96A56 240 aa6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 CFAP53Q96M91 514 aa6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 IRF2BPLQ9H1B7 796 aa6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 NUDCQ9Y266 331 aa6.18□□□□□ -1.42
TSPAN8-202ENST00000393330 PPP2R1AP30153 589 aa6.17□□□□□ -1.42
TSPAN8-202ENST00000393330 PPATQ06203 517 aa6.17□□□□□ -1.42
TSPAN8-202ENST00000393330 SF3B3Q15393 1217 aaKnown RBP6.17□□□□□ -1.42
TSPAN8-202ENST00000393330 ZRSR2Q15696 482 aaKnown RBP6.17□□□□□ -1.42
TSPAN8-202ENST00000393330 RSPO4Q2I0M5 234 aaPredicted RBP6.17□□□□□ -1.42
TSPAN8-202ENST00000393330 ZFYVE27Q5T4F4 411 aa6.17□□□□□ -1.42
TSPAN8-202ENST00000393330 TTLL7Q6ZT98 887 aa6.17□□□□□ -1.42
TSPAN8-202ENST00000393330 AGGF1Q8N302 714 aaeCLIP6.17□□□□□ -1.42
TSPAN8-202ENST00000393330 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.17□□□□□ -1.42
TSPAN8-202ENST00000393330 BADQ92934 168 aa6.17□□□□□ -1.42
TSPAN8-202ENST00000393330 ITFG2Q969R8 447 aa6.17□□□□□ -1.42
TSPAN8-202ENST00000393330 GPATCH3Q96I76 525 aa6.17□□□□□ -1.42
TSPAN8-202ENST00000393330 NIF3L1Q9GZT8 377 aa6.17□□□□□ -1.42
TSPAN8-202ENST00000393330 AKTIPQ9H8T0 292 aa6.17□□□□□ -1.42
TSPAN8-202ENST00000393330 TRMT112Q9UI30 125 aaKnown RBP6.17□□□□□ -1.42
TSPAN8-202ENST00000393330 TLDC2A0PJX2 215 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 H3BRJ5 948 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 DDX3YO15523 660 aaKnown RBP6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 HTATSF1O43719 755 aaKnown RBP6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 CREB3O43889 395 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 ZSCAN20P17040 1043 aaPredicted RBP6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 GTF2F1P35269 517 aaKnown RBP eCLIP6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 TERF1P54274 439 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 FANCCQ00597 558 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 ORC1Q13415 861 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 COL9A2Q14055 689 aaPredicted RBP6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 ACAP1Q15027 740 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 NKAPLQ5M9Q1 402 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 PEAR1Q5VY43 1037 aaPredicted RBP6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 ZNF280DQ6N043 979 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 TMC7Q7Z402 723 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 KIAA0825Q8IV33 1275 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 SMC5Q8IY18 1101 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 TMEM87AQ8NBN3 555 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 FRAT1Q92837 279 aaPredicted RBP6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 CHMP4CQ96CF2 233 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 KLHDC7BQ96G42 594 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 FAM210AQ96ND0 272 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 MYCBPQ99417 103 aaPredicted RBP6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 PAIP2Q9BPZ3 127 aaKnown RBP6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 SENP6Q9GZR1 1112 aaPredicted RBP6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 PIF1Q9H611 641 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 VEZTQ9HBM0 779 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 SEC31BQ9NQW1 1179 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 KCNK4Q9NYG8 393 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 KLHL42Q9P2K6 505 aa6.16□□□□□ -1.42
TSPAN8-202ENST00000393330 MAGEC2Q9UBF1 373 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms