RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 CHURC1Q8WUH1 139 aa15.91■□□□□ 0.14
MKS1-203ENST00000393120 ZBED3Q96IU2 234 aaPredicted RBP15.91■□□□□ 0.14
MKS1-203ENST00000393120 TSG101Q99816 390 aa15.91■□□□□ 0.14
MKS1-203ENST00000393120 TUBB2BQ9BVA1 445 aa15.91■□□□□ 0.14
MKS1-203ENST00000393120 PDGFDQ9GZP0 370 aaPredicted RBP15.91■□□□□ 0.14
MKS1-203ENST00000393120 PANK4Q9NVE7 773 aa15.91■□□□□ 0.14
MKS1-203ENST00000393120 MYO1AQ9UBC5 1043 aa15.91■□□□□ 0.14
MKS1-203ENST00000393120 EPN1Q9Y6I3 576 aaPredicted RBP15.91■□□□□ 0.14
MKS1-203ENST00000393120 PITPNM2Q9BZ72 1349 aa15.91■□□□□ 0.14
MKS1-203ENST00000393120 FRMD3A2A2Y4 597 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 ECE1P42892 770 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 ZBED6P86452 979 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 CDK17Q00537 523 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 ZNF662Q6ZS27 426 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 LRRC55Q6ZSA7 311 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 ZNF397Q8NF99 534 aaPredicted RBP15.9■□□□□ 0.14
MKS1-203ENST00000393120 ACER1Q8TDN7 264 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 PCDHA2Q9Y5H9 948 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 MRFAP1Q9Y605 127 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 COL4A5P29400 1685 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 EFCAB8A8MWE9 144 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 E9PMD0 336 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 FAM86B1E9PN63 330 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 PES1O00541 588 aaKnown RBP15.9■□□□□ 0.14
MKS1-203ENST00000393120 KIF20AO95235 890 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 FAM86B2P0C5J1 330 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 CYP11B2P19099 503 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 RPA1P27694 616 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 ELF2Q15723 593 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 VWA3BQ502W6 1294 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 ZCWPW2Q504Y3 356 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 FAM26FQ5R3K3 315 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 WDR59Q6PJI9 974 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 NIM1KQ8IY84 436 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 SPICE1Q8N0Z3 855 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 FEZ1Q99689 392 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 SH2D4AQ9H788 454 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 LZTFL1Q9NQ48 299 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 PGAP2Q9UHJ9 254 aa15.9■□□□□ 0.14
MKS1-203ENST00000393120 POTEB3A0JP26 581 aa15.89■□□□□ 0.13
MKS1-203ENST00000393120 POTECB2RU33 542 aa15.89■□□□□ 0.13
MKS1-203ENST00000393120 MED24O75448 989 aa15.89■□□□□ 0.13
MKS1-203ENST00000393120 NDUFA10O95299 355 aa15.89■□□□□ 0.13
MKS1-203ENST00000393120 ARHGAP25P42331 645 aa15.89■□□□□ 0.13
MKS1-203ENST00000393120 SLC12A3P55017 1021 aa15.89■□□□□ 0.13
MKS1-203ENST00000393120 MAN2A1Q16706 1144 aa15.89■□□□□ 0.13
MKS1-203ENST00000393120 KIAA1755Q5JYT7 1200 aa15.89■□□□□ 0.13
MKS1-203ENST00000393120 POTEBQ6S5H4 581 aa15.89■□□□□ 0.13
MKS1-203ENST00000393120 CCDC84Q86UT8 332 aaPredicted RBP15.89■□□□□ 0.13
MKS1-203ENST00000393120 FAM160B2Q86V87 743 aa15.89■□□□□ 0.13
MKS1-203ENST00000393120 CATSPER3Q86XQ3 398 aa15.89■□□□□ 0.13
MKS1-203ENST00000393120 MNS1Q8NEH6 495 aa15.89■□□□□ 0.13
MKS1-203ENST00000393120 CHP1Q99653 195 aa15.89■□□□□ 0.13
MKS1-203ENST00000393120 RANBP17Q9H2T7 1088 aaKnown RBP15.89■□□□□ 0.13
MKS1-203ENST00000393120 VCPKMTQ9H867 229 aa15.89■□□□□ 0.13
MKS1-203ENST00000393120 ZBTB12Q9Y330 459 aaPredicted RBP15.89■□□□□ 0.13
MKS1-203ENST00000393120 TADA3O75528 432 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 SPATA31C1P0DKV0 1188 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 TRIM21P19474 475 aaKnown RBP15.88■□□□□ 0.13
MKS1-203ENST00000393120 HNRNPH3P31942 346 aaKnown RBP15.88■□□□□ 0.13
MKS1-203ENST00000393120 CAP2P40123 477 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 BAG6P46379 1132 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 FKBP3Q00688 224 aaKnown RBP15.88■□□□□ 0.13
MKS1-203ENST00000393120 ERCC6LQ2NKX8 1250 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 ARHGAP29Q52LW3 1261 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 GPBP1Q86WP2 473 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 ACRBPQ8NEB7 543 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 POLR3CQ9BUI4 534 aaPredicted RBP15.88■□□□□ 0.13
MKS1-203ENST00000393120 NDST4Q9H3R1 872 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 ZNHIT6Q9NWK9 470 aaKnown RBP15.88■□□□□ 0.13
MKS1-203ENST00000393120 MSH4O15457 936 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 STAT3P40763 770 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 KIF4BQ2VIQ3 1234 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 ARSHQ5FYA8 562 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 FAM83BQ5T0W9 1011 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 ARHGAP27Q6ZUM4 889 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 CCDC170Q8IYT3 715 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 SYT2Q8N9I0 419 aaPredicted RBP15.88■□□□□ 0.13
MKS1-203ENST00000393120 LRRN4CLQ8ND94 238 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 EEF2KMTQ96G04 330 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 CEP63Q96MT8 703 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 DEFB129Q9H1M3 183 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.88■□□□□ 0.13
MKS1-203ENST00000393120 VAV3Q9UKW4 847 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 DNM3Q9UQ16 869 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 SIK3Q9Y2K2 1263 aa15.88■□□□□ 0.13
MKS1-203ENST00000393120 V9GYY5 206 aaPredicted RBP15.88■□□□□ 0.13
MKS1-203ENST00000393120 GNA14O95837 355 aa15.87■□□□□ 0.13
MKS1-203ENST00000393120 SSBP05455 408 aaKnown RBP eCLIP15.87■□□□□ 0.13
MKS1-203ENST00000393120 HOXA13P31271 388 aaPredicted RBP15.87■□□□□ 0.13
MKS1-203ENST00000393120 TGFB2P61812 414 aa15.87■□□□□ 0.13
MKS1-203ENST00000393120 UBXN4Q92575 508 aa15.87■□□□□ 0.13
MKS1-203ENST00000393120 CARD6Q9BX69 1037 aa15.87■□□□□ 0.13
MKS1-203ENST00000393120 IRX2Q9BZI1 471 aaPredicted RBP15.87■□□□□ 0.13
MKS1-203ENST00000393120 EDEM3Q9BZQ6 932 aa15.87■□□□□ 0.13
MKS1-203ENST00000393120 AGPAT5Q9NUQ2 364 aa15.87■□□□□ 0.13
MKS1-203ENST00000393120 FEM1BQ9UK73 627 aa15.87■□□□□ 0.13
MKS1-203ENST00000393120 MRPL11Q9Y3B7 192 aaKnown RBP15.87■□□□□ 0.13
MKS1-203ENST00000393120 IGLV3-22A0A075B6J6 115 aa15.86■□□□□ 0.13
MKS1-203ENST00000393120 A0A0U1RQJ8 604 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms