RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 SRRTQ9BXP5 876 aaKnown RBP22.39■■□□□ 1.18
PTPN11-202ENST00000392597 TRMT1Q9NXH9 659 aaKnown RBP22.39■■□□□ 1.18
PTPN11-202ENST00000392597 CFBP00751 764 aa22.39■■□□□ 1.17
PTPN11-202ENST00000392597 KIF4BQ2VIQ3 1234 aa22.39■■□□□ 1.17
PTPN11-202ENST00000392597 CEP135Q66GS9 1140 aa22.39■■□□□ 1.17
PTPN11-202ENST00000392597 SAMD7Q7Z3H4 446 aa22.39■■□□□ 1.17
PTPN11-202ENST00000392597 LDHDQ86WU2 507 aa22.39■■□□□ 1.17
PTPN11-202ENST00000392597 DNAJC19Q96DA6 116 aa22.39■■□□□ 1.17
PTPN11-202ENST00000392597 HOOK2Q96ED9 719 aa22.39■■□□□ 1.17
PTPN11-202ENST00000392597 CCDC51Q96ER9 411 aa22.39■■□□□ 1.17
PTPN11-202ENST00000392597 NAA15Q9BXJ9 866 aaKnown RBP22.39■■□□□ 1.17
PTPN11-202ENST00000392597 TAB2Q9NYJ8 693 aa22.39■■□□□ 1.17
PTPN11-202ENST00000392597 HACL1Q9UJ83 578 aa22.39■■□□□ 1.17
PTPN11-202ENST00000392597 KIAA1024Q9UPX6 916 aa22.39■■□□□ 1.17
PTPN11-202ENST00000392597 IQCA1LA6NCM1 817 aa22.38■■□□□ 1.17
PTPN11-202ENST00000392597 MSH4O15457 936 aa22.38■■□□□ 1.17
PTPN11-202ENST00000392597 ICAM1P05362 532 aa22.38■■□□□ 1.17
PTPN11-202ENST00000392597 TPM1P09493 284 aa22.38■■□□□ 1.17
PTPN11-202ENST00000392597 ZNF76P36508 570 aa22.38■■□□□ 1.17
PTPN11-202ENST00000392597 EPS15P42566 896 aa22.38■■□□□ 1.17
PTPN11-202ENST00000392597 DCAF15Q66K64 600 aa22.38■■□□□ 1.17
PTPN11-202ENST00000392597 DYMQ7RTS9 669 aa22.38■■□□□ 1.17
PTPN11-202ENST00000392597 CNGA4Q8IV77 575 aa22.38■■□□□ 1.17
PTPN11-202ENST00000392597 PRPF38AQ8NAV1 312 aaKnown RBP22.38■■□□□ 1.17
PTPN11-202ENST00000392597 VPS16Q9H269 839 aa22.38■■□□□ 1.17
PTPN11-202ENST00000392597 FBXO28Q9NVF7 368 aa22.38■■□□□ 1.17
PTPN11-202ENST00000392597 IGLV3-22A0A075B6J6 115 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 LGALS16A8MUM7 142 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 RPA1P27694 616 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 ADKP55263 362 aaKnown RBP22.37■■□□□ 1.17
PTPN11-202ENST00000392597 GOLGA8FQ08AF8 430 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 GOLGA8DPQ0D2H9 430 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 TBC1D10BQ4KMP7 808 aaPredicted RBP22.37■■□□□ 1.17
PTPN11-202ENST00000392597 ANKRD40Q6AI12 368 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 SLC39A2Q9NP94 309 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 ADARB2Q9NS39 739 aaKnown RBP22.37■■□□□ 1.17
PTPN11-202ENST00000392597 A0A1W2PQC6 194 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 POTEB3A0JP26 581 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 POTECB2RU33 542 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 DYNC1I1O14576 645 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 MFAP3LO75121 409 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 PLA2G4BP0C869 781 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 RBL2Q08999 1139 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 POTEBQ6S5H4 581 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 SLF1Q9BQI6 1058 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 VAV3Q9UKW4 847 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 RABGAP1Q9Y3P9 1069 aa22.37■■□□□ 1.17
PTPN11-202ENST00000392597 PITPNM2Q9BZ72 1349 aa22.36■■□□□ 1.17
PTPN11-202ENST00000392597 ZSCAN12O43309 604 aa22.36■■□□□ 1.17
PTPN11-202ENST00000392597 MED24O75448 989 aa22.36■■□□□ 1.17
PTPN11-202ENST00000392597 IDEP14735 1019 aa22.36■■□□□ 1.17
PTPN11-202ENST00000392597 INPP5BP32019 993 aa22.36■■□□□ 1.17
PTPN11-202ENST00000392597 STAT3P40763 770 aa22.36■■□□□ 1.17
PTPN11-202ENST00000392597 LRRC63Q05C16 580 aa22.36■■□□□ 1.17
PTPN11-202ENST00000392597 CCDC84Q86UT8 332 aaPredicted RBP22.36■■□□□ 1.17
PTPN11-202ENST00000392597 DOCK1Q14185 1865 aa22.36■■□□□ 1.17
PTPN11-202ENST00000392597 APOBEC3FQ8IUX4 373 aaKnown RBP22.35■■□□□ 1.17
PTPN11-202ENST00000392597 SEMA6BQ9H3T3 888 aa22.35■■□□□ 1.17
PTPN11-202ENST00000392597 PNMA2Q9UL42 364 aa22.35■■□□□ 1.17
PTPN11-202ENST00000392597 SCAF8Q9UPN6 1271 aaKnown RBP22.35■■□□□ 1.17
PTPN11-202ENST00000392597 E9PMD0 336 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 FGFR1OPO95684 399 aaKnown RBP22.34■■□□□ 1.17
PTPN11-202ENST00000392597 GYPCP04921 128 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 FECHP22830 423 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 HSD17B4P51659 736 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 GHRHRQ02643 423 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 UBXN1Q04323 297 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 COASYQ13057 564 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 NCAPH2Q6IBW4 605 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 CATSPER3Q86XQ3 398 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 CCDC65Q8IXS2 484 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 TBC1D5Q92609 795 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 POLR3CQ9BUI4 534 aaPredicted RBP22.34■■□□□ 1.17
PTPN11-202ENST00000392597 ASTN2O75129 1339 aaPredicted RBP22.34■■□□□ 1.17
PTPN11-202ENST00000392597 GOLGA6L9A6NEM1 432 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 DNM2P50570 870 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 USP14P54578 494 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 SLC12A3P55017 1021 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 SAMD3Q8N6K7 520 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 MB21D1Q8N884 522 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 ZNF507Q8TCN5 953 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 HPS3Q969F9 1004 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 PANK4Q9NVE7 773 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 ZNF112Q9UJU3 913 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 CCPG1Q9ULG6 757 aa22.34■■□□□ 1.17
PTPN11-202ENST00000392597 ZNF536O15090 1300 aa22.33■■□□□ 1.17
PTPN11-202ENST00000392597 SPATA31C1P0DKV0 1188 aa22.33■■□□□ 1.17
PTPN11-202ENST00000392597 CYP11B2P19099 503 aa22.33■■□□□ 1.17
PTPN11-202ENST00000392597 EPHX2P34913 555 aa22.33■■□□□ 1.17
PTPN11-202ENST00000392597 GPBP1Q86WP2 473 aa22.33■■□□□ 1.17
PTPN11-202ENST00000392597 CYP2W1Q8TAV3 490 aa22.33■■□□□ 1.17
PTPN11-202ENST00000392597 TRPM4Q8TD43 1214 aa22.33■■□□□ 1.17
PTPN11-202ENST00000392597 TUBGCP2Q9BSJ2 902 aa22.33■■□□□ 1.17
PTPN11-202ENST00000392597 WDR18Q9BV38 432 aa22.33■■□□□ 1.17
PTPN11-202ENST00000392597 DNM3Q9UQ16 869 aa22.33■■□□□ 1.17
PTPN11-202ENST00000392597 FRMD3A2A2Y4 597 aa22.32■■□□□ 1.16
PTPN11-202ENST00000392597 POTEFA5A3E0 1075 aa22.32■■□□□ 1.16
PTPN11-202ENST00000392597 SSBP05455 408 aaKnown RBP eCLIP22.32■■□□□ 1.16
PTPN11-202ENST00000392597 POTEIP0CG38 1075 aa22.32■■□□□ 1.16
PTPN11-202ENST00000392597 FDX1P10109 184 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms