RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 TOX2Q96NM4 488 aa12.81□□□□□ -0.36
TRAF3IP2-208ENST00000392556 FSD1Q9BTV5 496 aa12.81□□□□□ -0.36
TRAF3IP2-208ENST00000392556 CARD6Q9BX69 1037 aa12.81□□□□□ -0.36
TRAF3IP2-208ENST00000392556 SMIM22K7EJ46 135 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 BMP3P12645 472 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 ELF1P32519 619 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 ADCYAP1R1P41586 468 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 NT5C2P49902 561 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 FAM47AQ5JRC9 791 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 KCNV1Q6PIU1 500 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 NUP133Q8WUM0 1156 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 CEP95Q96GE4 821 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 PARD6BQ9BYG5 372 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 SPC25Q9HBM1 224 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 SMC3Q9UQE7 1217 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 M0R2C6 588 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 PGK2P07205 417 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 CST5P28325 142 aaPredicted RBP12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 CAMK4Q16566 473 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 PRAMEF19Q5SWL8 479 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 NOL8Q76FK4 1167 aaKnown RBP12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 CKAP2LQ8IYA6 745 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 SLC17A8Q8NDX2 589 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 OTUD7AQ8TE49 926 aaPredicted RBP12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 SEZ6LQ9BYH1 1024 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 DNAJC25Q9H1X3 360 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 ABHD16BQ9H3Z7 469 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 MTMR10Q9NXD2 777 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 MCM8Q9UJA3 840 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 PNMA2Q9UL42 364 aa12.8□□□□□ -0.36
TRAF3IP2-208ENST00000392556 MROH7Q68CQ1 1323 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 NRDCO43847 1150 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 DUSP11O75319 330 aaKnown RBP12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 KRT85P78386 507 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 PPARAQ07869 468 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 TRIM60Q495X7 471 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 SLFN13Q68D06 897 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 TRIM65Q6PJ69 517 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 CWC27Q6UX04 472 aaKnown RBP12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 HDXQ7Z353 690 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 PCSK9Q8NBP7 692 aaKnown RBP12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 FAM71BQ8TC56 605 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 EVI5LQ96CN4 794 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 DACT1Q9NYF0 836 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 GCFC2P16383 781 aaKnown RBP12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 STAT2P52630 851 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 RCSD1Q6JBY9 416 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 POTEDQ86YR6 584 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 ANKRD35Q8N283 1001 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 KIFC2Q96AC6 838 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 PDLIM7Q9NR12 457 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 HELLSQ9NRZ9 838 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 ANAPC4Q9UJX5 808 aa12.79□□□□□ -0.36
TRAF3IP2-208ENST00000392556 TMEM265A0A087WTH1 108 aa12.78□□□□□ -0.36
TRAF3IP2-208ENST00000392556 POTEB2H3BUK9 544 aa12.78□□□□□ -0.36
TRAF3IP2-208ENST00000392556 KIAA0355O15063 1070 aa12.78□□□□□ -0.36
TRAF3IP2-208ENST00000392556 ADAMTS4O75173 837 aa12.78□□□□□ -0.36
TRAF3IP2-208ENST00000392556 CLTBP09497 229 aa12.78□□□□□ -0.36
TRAF3IP2-208ENST00000392556 NKX3-2P78367 333 aa12.78□□□□□ -0.36
TRAF3IP2-208ENST00000392556 CRYMQ14894 314 aa12.78□□□□□ -0.36
TRAF3IP2-208ENST00000392556 ALX1Q15699 326 aa12.78□□□□□ -0.36
TRAF3IP2-208ENST00000392556 ANKRD33Q7Z3H0 272 aa12.78□□□□□ -0.36
TRAF3IP2-208ENST00000392556 KLHDC9Q8NEP7 349 aa12.78□□□□□ -0.36
TRAF3IP2-208ENST00000392556 CALR3Q96L12 384 aaKnown RBP12.78□□□□□ -0.36
TRAF3IP2-208ENST00000392556 TTC14Q96N46 770 aa12.78□□□□□ -0.36
TRAF3IP2-208ENST00000392556 ACAD9Q9H845 621 aa12.78□□□□□ -0.36
TRAF3IP2-208ENST00000392556 LIMCH1Q9UPQ0 1083 aa12.78□□□□□ -0.36
TRAF3IP2-208ENST00000392556 URI1O94763 535 aaPredicted RBP12.77□□□□□ -0.36
TRAF3IP2-208ENST00000392556 TXLNAP40222 546 aa12.77□□□□□ -0.36
TRAF3IP2-208ENST00000392556 SMAD3P84022 425 aaKnown RBP12.77□□□□□ -0.36
TRAF3IP2-208ENST00000392556 TFAP4Q01664 338 aa12.77□□□□□ -0.36
TRAF3IP2-208ENST00000392556 VPS53Q5VIR6 699 aa12.77□□□□□ -0.36
TRAF3IP2-208ENST00000392556 CCDC174Q6PII3 467 aa12.77□□□□□ -0.36
TRAF3IP2-208ENST00000392556 BORCS6Q96GS4 357 aa12.77□□□□□ -0.36
TRAF3IP2-208ENST00000392556 NUP88Q99567 741 aaPredicted RBP12.77□□□□□ -0.36
TRAF3IP2-208ENST00000392556 PDE11AQ9HCR9 933 aa12.77□□□□□ -0.36
TRAF3IP2-208ENST00000392556 PRDM5Q9NQX1 630 aaPredicted RBP12.77□□□□□ -0.36
TRAF3IP2-208ENST00000392556 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.77□□□□□ -0.36
TRAF3IP2-208ENST00000392556 COL11A1P12107 1806 aaPredicted RBP12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 A0A1W2PQ45 241 aaPredicted RBP12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 A0A1W2PQY0 241 aa12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ASB14A6NK59 587 aa12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 DCDC2CA8MYV0 355 aa12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 PRDM1O75626 825 aa12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 SNAI1O95863 264 aaPredicted RBP12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 PCP11498 1178 aaKnown RBP12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 HSPA4P34932 840 aa12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 SLC1A4P43007 532 aa12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TLE2Q04725 743 aa12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ACVR2BQ13705 512 aa12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ANO1Q5XXA6 986 aa12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TSHZ3Q63HK5 1081 aa12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 HOMER1Q86YM7 354 aa12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 CPXCR1Q8N123 301 aa12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 SCAND2PQ9GZW5 306 aaPredicted RBP12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 UPF3AQ9H1J1 476 aaKnown RBP12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 RAVER2Q9HCJ3 691 aaKnown RBP12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 STARD7Q9NQZ5 370 aa12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ZMYM6O95789 1325 aa12.77□□□□□ -0.37
TRAF3IP2-208ENST00000392556 SALL3Q9BXA9 1300 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms