RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 CUEDC2Q9H467 287 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 GDF3Q9NR23 364 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 BSDC1Q9NW68 430 aaPredicted RBP15.42■□□□□ 0.06
CCDC57-203ENST00000392343 PLAAQ9Y263 795 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 TRAF5O00463 557 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 LAD1O00515 517 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 PAK2Q13177 524 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 RAPGEF1Q13905 1077 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 TGFBRAP1Q8WUH2 860 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 AK8Q96MA6 479 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 CCT8L2Q96SF2 557 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 LSM14BQ9BX40 385 aaKnown RBP15.42■□□□□ 0.06
CCDC57-203ENST00000392343 FGFBP2Q9BYJ0 223 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 DLEC1Q9Y238 1755 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 MYH1P12882 1939 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 SF3A3Q12874 501 aaKnown RBP eCLIP15.41■□□□□ 0.061e-6■■■■■ 36.6
CCDC57-203ENST00000392343 KIAA0753Q2KHM9 967 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 CCDC40Q4G0X9 1142 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 FAM83BQ5T0W9 1011 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 C12orf60Q5U649 245 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 B4GALNT4Q76KP1 1039 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 FBXO33Q7Z6M2 555 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 LARP4BQ92615 738 aaKnown RBP15.41■□□□□ 0.06
CCDC57-203ENST00000392343 DDX12PQ92771 950 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 PIGSQ96S52 555 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 NCAPGQ9BPX3 1015 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 JPH2Q9BR39 696 aaPredicted RBP15.41■□□□□ 0.06
CCDC57-203ENST00000392343 EPN3Q9H201 632 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 CD248Q9HCU0 757 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 SLAIN2Q9P270 581 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 A0A087X0T9 212 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 PJA2O43164 708 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 SLC37A4O43826 429 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 TDP2O95551 362 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 FAM228BP0C875 321 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 SLC9C1Q4G0N8 1177 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 LRRC55Q6ZSA7 311 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 MAPKAPK5Q8IW41 473 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 FAM133AQ8N9E0 248 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 YY1AP1Q9H869 796 aa15.41■□□□□ 0.06
CCDC57-203ENST00000392343 PPP1R37O75864 691 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 NOL4O94818 638 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 FNTAP49354 379 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 GRIK5Q16478 980 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 PTGISQ16647 500 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 SBK1Q52WX2 424 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 SFMBT2Q5VUG0 894 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 KDM7AQ6ZMT4 941 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 UNC13DQ70J99 1090 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 AP1M1Q9BXS5 423 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 ZMYND12Q9H0C1 365 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 GNAQP50148 359 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 ECM1Q16610 540 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 SOGA3Q5TF21 947 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 NLRP14Q86W24 1093 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 DAGLBQ8NCG7 672 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 COA7Q96BR5 231 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 MAGEF1Q9HAY2 307 aa15.4■□□□□ 0.06
CCDC57-203ENST00000392343 PALM3A6NDB9 673 aaPredicted RBP15.39■□□□□ 0.05
CCDC57-203ENST00000392343 KCNK3O14649 394 aa15.39■□□□□ 0.05
CCDC57-203ENST00000392343 ATP2C2O75185 946 aa15.39■□□□□ 0.05
CCDC57-203ENST00000392343 TMOD1P28289 359 aa15.39■□□□□ 0.05
CCDC57-203ENST00000392343 CALCRLQ16602 461 aa15.39■□□□□ 0.05
CCDC57-203ENST00000392343 KRT25Q7Z3Z0 450 aa15.39■□□□□ 0.05
CCDC57-203ENST00000392343 CNPY4Q8N129 248 aa15.39■□□□□ 0.05
CCDC57-203ENST00000392343 PRPF38AQ8NAV1 312 aaKnown RBP15.39■□□□□ 0.05
CCDC57-203ENST00000392343 MYCBPAPQ8TBZ2 947 aa15.39■□□□□ 0.05
CCDC57-203ENST00000392343 SNX29Q8TEQ0 813 aa15.39■□□□□ 0.05
CCDC57-203ENST00000392343 ATP6V1G3Q96LB4 118 aa15.39■□□□□ 0.05
CCDC57-203ENST00000392343 C6orf50Q9HD87 102 aa15.39■□□□□ 0.05
CCDC57-203ENST00000392343 LOC102724428A0A0B4J2F2 783 aa15.39■□□□□ 0.05
CCDC57-203ENST00000392343 MDH1P40925 334 aaKnown RBP15.39■□□□□ 0.05
CCDC57-203ENST00000392343 SIK1P57059 783 aa15.39■□□□□ 0.05
CCDC57-203ENST00000392343 GLE1Q53GS7 698 aaKnown RBP15.39■□□□□ 0.05
CCDC57-203ENST00000392343 CEP89Q96ST8 783 aa15.39■□□□□ 0.05
CCDC57-203ENST00000392343 MYCBPQ99417 103 aaPredicted RBP15.39■□□□□ 0.05
CCDC57-203ENST00000392343 GEMIN8Q9NWZ8 242 aaKnown RBP15.39■□□□□ 0.05
CCDC57-203ENST00000392343 DCCP43146 1447 aa15.39■□□□□ 0.05
CCDC57-203ENST00000392343 SF3B2Q13435 895 aaKnown RBP15.38■□□□□ 0.05
CCDC57-203ENST00000392343 GUF1Q8N442 669 aaKnown RBP15.38■□□□□ 0.05
CCDC57-203ENST00000392343 FRMPD2Q68DX3 1309 aaPredicted RBP15.38■□□□□ 0.05
CCDC57-203ENST00000392343 TNFRSF8P28908 595 aa15.38■□□□□ 0.05
CCDC57-203ENST00000392343 ERVK-9P63128 1117 aa15.38■□□□□ 0.05
CCDC57-203ENST00000392343 CASZ1Q86V15 1759 aa15.38■□□□□ 0.05
CCDC57-203ENST00000392343 RNF10Q8N5U6 811 aaKnown RBP15.38■□□□□ 0.05
CCDC57-203ENST00000392343 RUBCNQ92622 972 aa15.38■□□□□ 0.05
CCDC57-203ENST00000392343 NPHP3-ACAD11A0A0J9YXS1 232 aa15.38■□□□□ 0.05
CCDC57-203ENST00000392343 GRID2IPA4D2P6 1211 aa15.38■□□□□ 0.05
CCDC57-203ENST00000392343 ACTN1P12814 892 aa15.38■□□□□ 0.05
CCDC57-203ENST00000392343 FLT3P36888 993 aa15.38■□□□□ 0.05
CCDC57-203ENST00000392343 KLHL30Q0D2K2 578 aa15.38■□□□□ 0.05
CCDC57-203ENST00000392343 ITGB3BPQ13352 177 aaPredicted RBP15.38■□□□□ 0.05
CCDC57-203ENST00000392343 NAB2Q15742 525 aa15.38■□□□□ 0.05
CCDC57-203ENST00000392343 CDC37Q16543 378 aaPredicted RBP15.38■□□□□ 0.05
CCDC57-203ENST00000392343 SWT1Q5T5J6 900 aaKnown RBP15.38■□□□□ 0.05
CCDC57-203ENST00000392343 MEI1Q5TIA1 1274 aa15.38■□□□□ 0.05
CCDC57-203ENST00000392343 GALNT17Q6IS24 598 aa15.38■□□□□ 0.05
CCDC57-203ENST00000392343 CCDC91Q7Z6B0 441 aa15.38■□□□□ 0.05
CCDC57-203ENST00000392343 CABS1Q96KC9 395 aa15.38■□□□□ 0.05
CCDC57-203ENST00000392343 GPR101Q96P66 508 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms