RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 TRAFD1O14545 582 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 TRIM66O15016 1216 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 C21orf2O43822 256 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 CDC14BO60729 498 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 TRPA1O75762 1119 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 C1QL1O75973 258 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF432O94892 652 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 ZBTB7AO95365 584 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 CST3P01034 146 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 FUCA1P04066 466 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 UMODP07911 640 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 GSTP1P09211 210 aaKnown RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 HNRNPA1P09651 372 aaKnown RBP eCLIP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 PRR35P0CG20 571 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 DNAH10OSP0CZ25 163 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 HKR1P10072 659 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 LAG3P18627 525 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 WT1P19544 449 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 KELP23276 732 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 PRPH2P23942 346 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 HOXD9P28356 352 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 NTF4P34130 210 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 IL13P35225 146 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 ZEB1P37275 1124 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 MAN2A2P49641 1150 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 LIG3P49916 1009 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 HTR6P50406 440 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 CSRP3P50461 194 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 HLCSP50747 726 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 SCNN1GP51170 649 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 SEC24CP53992 1094 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 GAS1P54826 345 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 JAM2P57087 298 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 PROK1P58294 105 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 EIF4G2P78344 907 aaKnown RBP eCLIP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 CFHR1Q03591 330 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 SLC10A2Q12908 348 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 DUSP8Q13202 625 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 ADAM15Q13444 863 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 EIF4EBP2Q13542 120 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF268Q14587 947 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 LLGL1Q15334 1064 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 CHRNA2Q15822 529 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 CCDC6Q16204 474 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 ASIC2Q16515 512 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 BMT2Q1RMZ1 405 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 TIGD2Q4W5G0 525 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 PXDC1Q5TGL8 231 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 KHDRBS2Q5VWX1 349 aaKnown RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 CAPRIN2Q6IMN6 1127 aaKnown RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 PDE12Q6L8Q7 609 aaKnown RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 LVRNQ6Q4G3 990 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 ETV3LQ6ZN32 361 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF788Q6ZQV5 615 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 C9orf47Q6ZRZ4 202 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 DHX30Q7L2E3 1194 aaKnown RBP eCLIP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 TRIM50Q86XT4 487 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 REXO1L1PQ8IX06 675 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 ANKRD35Q8N283 1001 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 PHTF2Q8N3S3 785 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 LCORLQ8N3X6 602 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 D2HGDHQ8N465 521 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 LILRA3Q8N6C8 439 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 VGLL2Q8N8G2 317 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 DTWD2Q8NBA8 298 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 SPRYD3Q8NCJ5 442 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 BANK1Q8NDB2 785 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 NLGN2Q8NFZ4 835 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 TPCN2Q8NHX9 752 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 HASPINQ8TF76 798 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 CHMP7Q8WUX9 453 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 LINC00476Q8WZB0 136 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 DDB2Q92466 427 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 DPF1Q92782 380 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 CAVIN3Q969G5 261 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 PMEPA1Q969W9 287 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 ACSBG1Q96GR2 724 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 MYO19Q96H55 970 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 PEX11GQ96HA9 241 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 FAM84BQ96KN1 310 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 CLIC6Q96NY7 704 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 DPYSL5Q9BPU6 564 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 SH2D3AQ9BRG2 576 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 PYGO2Q9BRQ0 406 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 TMEM79Q9BSE2 394 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 ALOXE3Q9BYJ1 711 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 SEMA4CQ9C0C4 833 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 ZC3H12CQ9C0D7 883 aaKnown RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 RSPH6AQ9H0K4 717 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 AGO3Q9H9G7 860 aaKnown RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 ELP3Q9H9T3 547 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 PDLIM7Q9NR12 457 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 TRMT13Q9NUP7 481 aaKnown RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 SYBUQ9NX95 663 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 FLRT1Q9NZU1 646 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 SELENONQ9NZV5 590 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 KIAA1522Q9P206 1035 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 RALYQ9UKM9 306 aaKnown RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 TCFL5Q9UL49 500 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 ICAM5Q9UMF0 924 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms