RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 MAP3K11Q16584 847 aa8.57□□□□□ -1.04
TRBV28-201ENST00000390400 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.57□□□□□ -1.04
TRBV28-201ENST00000390400 CCDC144BQ3MJ40 725 aa8.57□□□□□ -1.04
TRBV28-201ENST00000390400 TEX35Q5T0J7 233 aa8.57□□□□□ -1.04
TRBV28-201ENST00000390400 CDC42EP5Q6NZY7 148 aa8.57□□□□□ -1.04
TRBV28-201ENST00000390400 ADAMTSL4Q6UY14 1074 aa8.57□□□□□ -1.04
TRBV28-201ENST00000390400 CEP120Q8N960 986 aa8.57□□□□□ -1.04
TRBV28-201ENST00000390400 TRPM4Q8TD43 1214 aa8.57□□□□□ -1.04
TRBV28-201ENST00000390400 ZBED3Q96IU2 234 aaPredicted RBP8.57□□□□□ -1.04
TRBV28-201ENST00000390400 EAF1Q96JC9 268 aaPredicted RBP8.57□□□□□ -1.04
TRBV28-201ENST00000390400 PRMT6Q96LA8 375 aaPredicted RBP8.57□□□□□ -1.04
TRBV28-201ENST00000390400 SPATA32Q96LK8 384 aa8.57□□□□□ -1.04
TRBV28-201ENST00000390400 NACAP1Q9BZK3 213 aa8.57□□□□□ -1.04
TRBV28-201ENST00000390400 IL25Q9H293 177 aa8.57□□□□□ -1.04
TRBV28-201ENST00000390400 TDRD3Q9H7E2 651 aaKnown RBP8.57□□□□□ -1.04
TRBV28-201ENST00000390400 LIN7BQ9HAP6 207 aa8.57□□□□□ -1.04
TRBV28-201ENST00000390400 PCDHAC2Q9Y5I4 1007 aa8.57□□□□□ -1.04
TRBV28-201ENST00000390400 SLC4A4Q9Y6R1 1079 aa8.57□□□□□ -1.04
TRBV28-201ENST00000390400 RPAP1Q9BWH6 1393 aaPredicted RBP8.57□□□□□ -1.04
TRBV28-201ENST00000390400 FOCADQ5VW36 1801 aa8.57□□□□□ -1.04
TRBV28-201ENST00000390400 BAZ2AQ9UIF9 1905 aaKnown RBP8.56□□□□□ -1.04
TRBV28-201ENST00000390400 NAV1Q8NEY1 1877 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 CLRN2A0PK11 232 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 WNT10BO00744 389 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 PRKAB2O43741 272 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 ADCY5O95622 1261 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 APPP05067 770 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 CELA3AP09093 270 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 TPM1P09493 284 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 CCDC192P0DO97 292 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 HSPD1P10809 573 aaKnown RBP8.56□□□□□ -1.04
TRBV28-201ENST00000390400 EDN3P14138 238 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 CD33P20138 364 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 EPHX2P34913 555 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 NBPF9Q3BBW0 867 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 CCNJLQ8IV13 435 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 CCDC112Q8NEF3 446 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 KIF18AQ8NI77 898 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 ABHD17AQ96GS6 310 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 ERO1AQ96HE7 468 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 OSMRQ99650 979 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 NOC4LQ9BVI4 516 aaKnown RBP8.56□□□□□ -1.04
TRBV28-201ENST00000390400 NUCKS1Q9H1E3 243 aaKnown RBP8.56□□□□□ -1.04
TRBV28-201ENST00000390400 BRMS1Q9HCU9 246 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 ATP13A2Q9NQ11 1180 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 ZNF70Q9UC06 446 aaPredicted RBP8.56□□□□□ -1.04
TRBV28-201ENST00000390400 ZDHHC9Q9Y397 364 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 MYH1P12882 1939 aa8.56□□□□□ -1.04
TRBV28-201ENST00000390400 POLR2AP24928 1970 aaKnown RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 GSG1L2A8MUP6 293 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 AXIN1O15169 862 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 WDHD1O75717 1129 aaPredicted RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 VEGFAP15692 232 aaPredicted RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 TDO2P48775 406 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 CACNB3P54284 484 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 NCBP1Q09161 790 aaKnown RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 SPEM2Q0P670 501 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 GPS2Q13227 327 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 PICALMQ13492 652 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 GNL2Q13823 731 aaKnown RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 BMS1Q14692 1282 aaKnown RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 AXDND1Q5T1B0 1012 aaPredicted RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 VPS53Q5VIR6 699 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 FKBP1CQ5VVH2 108 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 USP50Q70EL3 339 aaPredicted RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 PNMA8AQ86V59 439 aaPredicted RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 MAPKAPK5Q8IW41 473 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 TEX2Q8IWB9 1127 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 TXLNBQ8N3L3 684 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 RASGRP4Q8TDF6 673 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 ZNF526Q8TF50 670 aaPredicted RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 TGFBRAP1Q8WUH2 860 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 SDR42E1Q8WUS8 393 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 GPRASP2Q96D09 838 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 NSUN5Q96P11 429 aaKnown RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 FUCA2Q9BTY2 467 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 DSCC1Q9BVC3 393 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 IDI2Q9BXS1 227 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 LSG1Q9H089 658 aaKnown RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 NAPBQ9H115 298 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 TAF1DQ9H5J8 278 aaPredicted RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 VEZTQ9HBM0 779 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 PRDM10Q9NQV6 1147 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 AAASQ9NRG9 546 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 ATP8A2Q9NTI2 1148 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 DZANK1Q9NVP4 752 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 GEMIN8Q9NWZ8 242 aaKnown RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 CWC15Q9P013 229 aaKnown RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 TLR6Q9Y2C9 796 aa8.55□□□□□ -1.04
TRBV28-201ENST00000390400 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.55□□□□□ -1.04
TRBV28-201ENST00000390400 FLT1P17948 1338 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 TCP10L2B9ZVM9 353 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 J3QW42 95 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 MAN1A2O60476 641 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 DGAT1O75907 488 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 TPM4P67936 248 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 PTH1RQ03431 593 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 FAAP100Q0VG06 881 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 NFIAQ12857 509 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 TNFAIP1Q13829 316 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms