RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 BAZ2BQ9UIF8 2168 aaKnown RBP13.87□□□□□ -0.19
SOD1-202ENST00000389995 C19orf67A6NJJ6 358 aa13.86□□□□□ -0.19
SOD1-202ENST00000389995 ORC4O43929 436 aa13.86□□□□□ -0.19
SOD1-202ENST00000389995 PARNO95453 639 aaKnown RBP13.86□□□□□ -0.19
SOD1-202ENST00000389995 AMHP03971 560 aa13.86□□□□□ -0.19
SOD1-202ENST00000389995 ZNF543Q08ER8 600 aa13.86□□□□□ -0.19
SOD1-202ENST00000389995 MKRN4PQ13434 485 aaPredicted RBP13.86□□□□□ -0.19
SOD1-202ENST00000389995 DGKDQ16760 1214 aa13.86□□□□□ -0.19
SOD1-202ENST00000389995 PTPROQ16827 1216 aa13.86□□□□□ -0.19
SOD1-202ENST00000389995 PUS10Q3MIT2 529 aaKnown RBP13.86□□□□□ -0.19
SOD1-202ENST00000389995 PI4K2BQ8TCG2 481 aa13.86□□□□□ -0.19
SOD1-202ENST00000389995 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
SOD1-202ENST00000389995 PABPC5Q96DU9 382 aaKnown RBP13.86□□□□□ -0.19
SOD1-202ENST00000389995 B4DLN1 442 aa13.85□□□□□ -0.19
SOD1-202ENST00000389995 H3BNC9 293 aa13.85□□□□□ -0.19
SOD1-202ENST00000389995 HAS3O00219 553 aa13.85□□□□□ -0.19
SOD1-202ENST00000389995 EFCAB14O75071 495 aa13.85□□□□□ -0.19
SOD1-202ENST00000389995 EIF2AK2P19525 551 aaKnown RBP13.85□□□□□ -0.19
SOD1-202ENST00000389995 LTBRP36941 435 aa13.85□□□□□ -0.19
SOD1-202ENST00000389995 THPOP40225 353 aa13.85□□□□□ -0.19
SOD1-202ENST00000389995 MRPL12P52815 198 aaKnown RBP13.85□□□□□ -0.19
SOD1-202ENST00000389995 DLX2Q07687 328 aaPredicted RBP13.85□□□□□ -0.19
SOD1-202ENST00000389995 TIGD5Q53EQ6 642 aa13.85□□□□□ -0.19
SOD1-202ENST00000389995 ADHFE1Q8IWW8 467 aa13.85□□□□□ -0.19
SOD1-202ENST00000389995 DHX37Q8IY37 1157 aaKnown RBP13.85□□□□□ -0.19
SOD1-202ENST00000389995 TMEM192Q8IY95 271 aa13.85□□□□□ -0.19
SOD1-202ENST00000389995 SYTL5Q8TDW5 730 aaPredicted RBP13.85□□□□□ -0.19
SOD1-202ENST00000389995 YME1L1Q96TA2 773 aa13.85□□□□□ -0.19
SOD1-202ENST00000389995 CTNNA3Q9UI47 895 aa13.85□□□□□ -0.19
SOD1-202ENST00000389995 DDX41Q9UJV9 622 aaKnown RBP13.85□□□□□ -0.19
SOD1-202ENST00000389995 ANAPC4Q9UJX5 808 aa13.85□□□□□ -0.19
SOD1-202ENST00000389995 WDR19Q8NEZ3 1342 aa13.85□□□□□ -0.19
SOD1-202ENST00000389995 RSPH10B2B2RC85 870 aa13.84□□□□□ -0.19
SOD1-202ENST00000389995 F2P00734 622 aa13.84□□□□□ -0.19
SOD1-202ENST00000389995 RSPH10BP0C881 870 aa13.84□□□□□ -0.19
SOD1-202ENST00000389995 GTF2F1P35269 517 aaKnown RBP eCLIP13.84□□□□□ -0.19
SOD1-202ENST00000389995 HAND2P61296 217 aa13.84□□□□□ -0.19
SOD1-202ENST00000389995 IER5LQ5T953 404 aa13.84□□□□□ -0.19
SOD1-202ENST00000389995 RPAINQ86UA6 219 aa13.84□□□□□ -0.19
SOD1-202ENST00000389995 PRSS33Q8NF86 280 aa13.84□□□□□ -0.19
SOD1-202ENST00000389995 ZFP91Q96JP5 570 aaPredicted RBP13.84□□□□□ -0.19
SOD1-202ENST00000389995 RMDN3Q96TC7 470 aa13.84□□□□□ -0.19
SOD1-202ENST00000389995 NSUN3Q9H649 340 aaKnown RBP13.84□□□□□ -0.19
SOD1-202ENST00000389995 DCTPP1Q9H773 170 aa13.84□□□□□ -0.19
SOD1-202ENST00000389995 CACNA1HO95180 2353 aa13.84□□□□□ -0.19
SOD1-202ENST00000389995 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.83□□□□□ -0.2
SOD1-202ENST00000389995 CTSHP09668 335 aa13.83□□□□□ -0.2
SOD1-202ENST00000389995 FGRP09769 529 aa13.83□□□□□ -0.2
SOD1-202ENST00000389995 STXBP2Q15833 593 aa13.83□□□□□ -0.2
SOD1-202ENST00000389995 PLEKHG4Q58EX7 1191 aa13.83□□□□□ -0.2
SOD1-202ENST00000389995 FBXO11Q86XK2 927 aa13.83□□□□□ -0.2
SOD1-202ENST00000389995 NSUN6Q8TEA1 469 aaKnown RBP13.83□□□□□ -0.2
SOD1-202ENST00000389995 ZKSCAN3Q9BRR0 538 aa13.83□□□□□ -0.2
SOD1-202ENST00000389995 KATNAL1Q9BW62 490 aa13.83□□□□□ -0.2
SOD1-202ENST00000389995 MRVI1Q9Y6F6 885 aa13.83□□□□□ -0.2
SOD1-202ENST00000389995 DMDP11532 3685 aa13.83□□□□□ -0.2
SOD1-202ENST00000389995 LINC01565O15544 149 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 SNHG28P0DPA3 235 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 COL19A1Q14993 1142 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 CDC37Q16543 378 aaPredicted RBP13.82□□□□□ -0.2
SOD1-202ENST00000389995 HSDL1Q3SXM5 330 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 ARHGEF16Q5VV41 709 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 SERINC5Q86VE9 423 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 RNF135Q8IUD6 432 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 RGS22Q8NE09 1264 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 PPTC7Q8NI37 304 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 TOP1MTQ969P6 601 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 MFSD14AQ96MC6 490 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 KCNH6Q9H252 994 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 IGFLR1Q9H665 355 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 TCP11L1Q9NUJ3 509 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 PRKAG3Q9UGI9 489 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 PLXNA4Q9HCM2 1894 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 COL4A6Q14031 1691 aa13.82□□□□□ -0.2
SOD1-202ENST00000389995 TTC3P53804 2025 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 PTPRZ1P23471 2315 aaPredicted RBP13.81□□□□□ -0.2
SOD1-202ENST00000389995 MYO10Q9HD67 2058 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 LAMA4Q16363 1823 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 GRM6O15303 877 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 TREHO43280 583 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 MBTPS2O43462 519 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 FGAP02671 866 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 MYCLP12524 364 aaPredicted RBP13.81□□□□□ -0.2
SOD1-202ENST00000389995 CTNNB1P35222 781 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 HYAL1Q12794 435 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 LAMC2Q13753 1193 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 GPKOWQ92917 476 aaPredicted RBP eCLIP13.81□□□□□ -0.2
SOD1-202ENST00000389995 ATP6V0A1Q93050 837 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 EMID1Q96A84 441 aaPredicted RBP13.81□□□□□ -0.2
SOD1-202ENST00000389995 SAMD11Q96NU1 681 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 IFIH1Q9BYX4 1025 aaKnown RBP13.81□□□□□ -0.2
SOD1-202ENST00000389995 CHMP4BQ9H444 224 aaKnown RBP13.81□□□□□ -0.2
SOD1-202ENST00000389995 BCAS3Q9H6U6 928 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 FAM50BQ9Y247 325 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 TTC41PQ6P2S7 1318 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 EMSYQ7Z589 1322 aa13.81□□□□□ -0.2
SOD1-202ENST00000389995 TBX10O75333 385 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 EIF3JO75822 258 aaKnown RBP13.8□□□□□ -0.2
SOD1-202ENST00000389995 RGS20O76081 388 aa13.8□□□□□ -0.2
SOD1-202ENST00000389995 NR3C2P08235 984 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms