RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 TRIM67Q6ZTA4 783 aa11.33□□□□□ -0.6
IFT88-203ENST00000389373 FIBCD1Q8N539 461 aa11.33□□□□□ -0.6
IFT88-203ENST00000389373 SEPT8Q92599 483 aa11.33□□□□□ -0.6
IFT88-203ENST00000389373 TOP1MTQ969P6 601 aa11.33□□□□□ -0.6
IFT88-203ENST00000389373 TMEM47Q9BQJ4 181 aa11.33□□□□□ -0.6
IFT88-203ENST00000389373 IFIH1Q9BYX4 1025 aaKnown RBP11.33□□□□□ -0.6
IFT88-203ENST00000389373 ZBTB40Q9NUA8 1239 aa11.33□□□□□ -0.6
IFT88-203ENST00000389373 PNMA2Q9UL42 364 aa11.33□□□□□ -0.6
IFT88-203ENST00000389373 DDX19BQ9UMR2 479 aa11.33□□□□□ -0.6
IFT88-203ENST00000389373 GRM6O15303 877 aa11.32□□□□□ -0.6
IFT88-203ENST00000389373 LINC01565O15544 149 aa11.32□□□□□ -0.6
IFT88-203ENST00000389373 CTSHP09668 335 aa11.32□□□□□ -0.6
IFT88-203ENST00000389373 TOP1P11387 765 aaKnown RBP11.32□□□□□ -0.6
IFT88-203ENST00000389373 TCF15Q12870 199 aa11.32□□□□□ -0.6
IFT88-203ENST00000389373 MKRN4PQ13434 485 aaPredicted RBP11.32□□□□□ -0.6
IFT88-203ENST00000389373 LAMC2Q13753 1193 aa11.32□□□□□ -0.6
IFT88-203ENST00000389373 HIC1Q14526 733 aa11.32□□□□□ -0.6
IFT88-203ENST00000389373 ARHGEF16Q5VV41 709 aa11.32□□□□□ -0.6
IFT88-203ENST00000389373 BMP8AQ7Z5Y6 402 aa11.32□□□□□ -0.6
IFT88-203ENST00000389373 NSUN6Q8TEA1 469 aaKnown RBP11.32□□□□□ -0.6
IFT88-203ENST00000389373 ATOH1Q92858 354 aaPredicted RBP11.32□□□□□ -0.6
IFT88-203ENST00000389373 PRRX2Q99811 253 aa11.32□□□□□ -0.6
IFT88-203ENST00000389373 FSD1Q9BTV5 496 aa11.32□□□□□ -0.6
IFT88-203ENST00000389373 UBA5Q9GZZ9 404 aa11.32□□□□□ -0.6
IFT88-203ENST00000389373 CD207Q9UJ71 328 aa11.32□□□□□ -0.6
IFT88-203ENST00000389373 DDX41Q9UJV9 622 aaKnown RBP11.32□□□□□ -0.6
IFT88-203ENST00000389373 MRVI1Q9Y6F6 885 aa11.32□□□□□ -0.6
IFT88-203ENST00000389373 BRWD1Q9NSI6 2320 aa11.32□□□□□ -0.6
IFT88-203ENST00000389373 C17orf102A2RUQ5 167 aa11.31□□□□□ -0.6
IFT88-203ENST00000389373 HAS3O00219 553 aa11.31□□□□□ -0.6
IFT88-203ENST00000389373 GOLGA8HP0CJ92 632 aa11.31□□□□□ -0.6
IFT88-203ENST00000389373 PDHBP11177 359 aa11.31□□□□□ -0.6
IFT88-203ENST00000389373 EIF2AK2P19525 551 aaKnown RBP11.31□□□□□ -0.6
IFT88-203ENST00000389373 NDUFV1P49821 464 aa11.31□□□□□ -0.6
IFT88-203ENST00000389373 SMAD4Q13485 552 aaKnown RBP11.31□□□□□ -0.6
IFT88-203ENST00000389373 COL19A1Q14993 1142 aa11.31□□□□□ -0.6
IFT88-203ENST00000389373 SYTL5Q8TDW5 730 aaPredicted RBP11.31□□□□□ -0.6
IFT88-203ENST00000389373 ATP6V0A1Q93050 837 aa11.31□□□□□ -0.6
IFT88-203ENST00000389373 IL17RAQ96F46 866 aa11.31□□□□□ -0.6
IFT88-203ENST00000389373 RMDN3Q96TC7 470 aa11.31□□□□□ -0.6
IFT88-203ENST00000389373 OSBPL7Q9BZF2 842 aa11.31□□□□□ -0.6
IFT88-203ENST00000389373 CPVLQ9H3G5 476 aa11.31□□□□□ -0.6
IFT88-203ENST00000389373 WDR19Q8NEZ3 1342 aa11.31□□□□□ -0.6
IFT88-203ENST00000389373 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.3□□□□□ -0.6
IFT88-203ENST00000389373 CCER2I3L3R5 266 aa11.3□□□□□ -0.6
IFT88-203ENST00000389373 TBX10O75333 385 aa11.3□□□□□ -0.6
IFT88-203ENST00000389373 F2P00734 622 aa11.3□□□□□ -0.6
IFT88-203ENST00000389373 MYCLP12524 364 aaPredicted RBP11.3□□□□□ -0.6
IFT88-203ENST00000389373 BMPR1AP36894 532 aa11.3□□□□□ -0.6
IFT88-203ENST00000389373 ZXDAP98168 799 aa11.3□□□□□ -0.6
IFT88-203ENST00000389373 HNRNPUQ00839 825 aaKnown RBP eCLIP11.3□□□□□ -0.6
IFT88-203ENST00000389373 ZNF543Q08ER8 600 aa11.3□□□□□ -0.6
IFT88-203ENST00000389373 PKN1Q16512 942 aa11.3□□□□□ -0.6
IFT88-203ENST00000389373 CTC1Q2NKJ3 1217 aa11.3□□□□□ -0.6
IFT88-203ENST00000389373 ZMYM1Q5SVZ6 1142 aa11.3□□□□□ -0.6
IFT88-203ENST00000389373 FBXL6Q8N531 539 aa11.3□□□□□ -0.6
IFT88-203ENST00000389373 RGS22Q8NE09 1264 aa11.3□□□□□ -0.6
IFT88-203ENST00000389373 PPTC7Q8NI37 304 aa11.3□□□□□ -0.6
IFT88-203ENST00000389373 SPATA33Q96N06 139 aa11.3□□□□□ -0.6
IFT88-203ENST00000389373 C11orf84Q9BUA3 381 aaPredicted RBP11.3□□□□□ -0.6
IFT88-203ENST00000389373 LMAN2LQ9H0V9 348 aa11.3□□□□□ -0.6
IFT88-203ENST00000389373 COL20A1Q9P218 1284 aa11.3□□□□□ -0.6
IFT88-203ENST00000389373 TREHO43280 583 aa11.29□□□□□ -0.6
IFT88-203ENST00000389373 EIF3JO75822 258 aaKnown RBP11.29□□□□□ -0.6
IFT88-203ENST00000389373 RB1P06400 928 aa11.29□□□□□ -0.6
IFT88-203ENST00000389373 NR3C2P08235 984 aa11.29□□□□□ -0.6
IFT88-203ENST00000389373 NOVP48745 357 aa11.29□□□□□ -0.6
IFT88-203ENST00000389373 SERINC5Q86VE9 423 aa11.29□□□□□ -0.6
IFT88-203ENST00000389373 IWS1Q96ST2 819 aa11.29□□□□□ -0.6
IFT88-203ENST00000389373 CHMP4BQ9H444 224 aaKnown RBP11.29□□□□□ -0.6
IFT88-203ENST00000389373 ALG13Q9NP73 1137 aaKnown RBP11.29□□□□□ -0.6
IFT88-203ENST00000389373 H0Y858 1186 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 ORC4O43929 436 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 DHX16O60231 1041 aaKnown RBP11.28□□□□□ -0.6
IFT88-203ENST00000389373 PPFIA4O75335 1185 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 GGPS1O95749 300 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 CFBP00751 764 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 VCPP55072 806 aaKnown RBP11.28□□□□□ -0.6
IFT88-203ENST00000389373 RRP1P56182 461 aaKnown RBP11.28□□□□□ -0.6
IFT88-203ENST00000389373 FOXK2Q01167 660 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 ADAM15Q13444 863 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 CDC37Q16543 378 aaPredicted RBP11.28□□□□□ -0.6
IFT88-203ENST00000389373 HSDL1Q3SXM5 330 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 VPS53Q5VIR6 699 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 RBM23Q86U06 439 aaKnown RBP11.28□□□□□ -0.6
IFT88-203ENST00000389373 MCF2L2Q86YR7 1114 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 EMID1Q96A84 441 aaPredicted RBP11.28□□□□□ -0.6
IFT88-203ENST00000389373 ZFP91Q96JP5 570 aaPredicted RBP11.28□□□□□ -0.6
IFT88-203ENST00000389373 RPGRIP1Q96KN7 1286 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 MLXIPQ9HAP2 919 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 VAT1LQ9HCJ6 419 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 TLR9Q9NR96 1032 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 RWDD3Q9Y3V2 267 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 ABCB11O95342 1321 aa11.28□□□□□ -0.6
IFT88-203ENST00000389373 C5orf67F2Z3F1 127 aa11.27□□□□□ -0.61
IFT88-203ENST00000389373 FOXP2O15409 715 aa11.27□□□□□ -0.61
IFT88-203ENST00000389373 SMIM10L2AP0DMW4 78 aa11.27□□□□□ -0.61
IFT88-203ENST00000389373 SMIM10L2BP0DMW5 78 aa11.27□□□□□ -0.61
IFT88-203ENST00000389373 AVPR2P30518 371 aa11.27□□□□□ -0.61
IFT88-203ENST00000389373 BTG3Q14201 252 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms