RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 MCF2LO15068 1137 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 ATP1A2P50993 1020 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 CAPN12Q6ZSI9 719 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 WDR11Q9BZH6 1224 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 DHX36Q9H2U1 1008 aaKnown RBP13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 ASAP1Q9ULH1 1129 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 NUB1Q9Y5A7 615 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 EFCAB8A8MWE9 144 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 SF3A3Q12874 501 aaKnown RBP eCLIP13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 ARHGEF18Q6ZSZ5 1173 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 BCORL1Q5H9F3 1711 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 GNGT1P63211 74 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 RAB44Q7Z6P3 723 aaPredicted RBP13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 METTL23Q86XA0 190 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 KMT5AQ9NQR1 393 aa13.37□□□□□ -0.27
KCNQ3-201ENST00000388996 IREB2P48200 963 aaKnown RBP13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 SESN3P58005 492 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 COG7P83436 770 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 Q9H521 79 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 PTCH1Q13635 1447 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 BBOX1O75936 387 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 KRT10P13645 584 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 GBP7Q8N8V2 638 aaPredicted RBP13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 NLRP7Q8WX94 980 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 ZNF653Q96CK0 615 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 SMYD2Q9NRG4 433 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 KNTC1P50748 2209 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 SGK1O00141 431 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 HVCN1Q96D96 273 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 IFT122Q9HBG6 1241 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 GOLGA8QA0A0J9YX86 632 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 GOLGA8OA6NCC3 632 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 GOLGA8NF8WBI6 632 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 SART1O43290 800 aaKnown RBP13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 CPP00450 1065 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 STAP2Q9UGK3 403 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 ARHGEF37A1IGU5 675 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 INO80B-WBP1J3KQ70 363 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 ZNF589Q86UQ0 364 aaPredicted RBP13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 SPATS2Q86XZ4 545 aaKnown RBP13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 INO80BQ9C086 356 aaPredicted RBP13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 GPR108Q9NPR9 543 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 ANAPC5Q9UJX4 755 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 NPR1P16066 1061 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 DCLK2Q8N568 766 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 ZNF148Q9UQR1 794 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 PTPN22Q9Y2R2 807 aa13.36□□□□□ -0.27
KCNQ3-201ENST00000388996 MYO1FO00160 1098 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 ERFEQ4G0M1 354 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 GPT2Q8TD30 523 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 EPN1Q9Y6I3 576 aaPredicted RBP13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 IGSF1Q8N6C5 1336 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 GUCY2DQ02846 1103 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 SLC39A14Q15043 492 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 NACC1Q96RE7 527 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 ARHGEF40Q8TER5 1519 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 MED7O43513 233 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 AFPP02771 609 aaKnown RBP13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 TAB3Q8N5C8 712 aaPredicted RBP13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 DPH5Q9H2P9 285 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 ABCA6Q8N139 1617 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 CLRN2A0PK11 232 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 LRRN2O75325 713 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 PSAPP07602 524 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 ZNF233A6NK53 670 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 NRKQ7Z2Y5 1582 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 SH2B2O14492 632 aaPredicted RBP13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 RYBPQ8N488 228 aaPredicted RBP13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 PUS3Q9BZE2 481 aaKnown RBP13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 MADDQ8WXG6 1647 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 MMEL1Q495T6 779 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 DNAJC24Q6P3W2 148 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 BBS5Q8N3I7 341 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 ACTN1P12814 892 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 DALRD3Q5D0E6 543 aaKnown RBP13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 SIX6OS1Q8N1H7 587 aa13.35□□□□□ -0.27
KCNQ3-201ENST00000388996 DNAJC13O75165 2243 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 INHBAP08476 426 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 MAPK4P31152 587 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 ANXA13P27216 316 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 CAPS2Q9BXY5 557 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 CCDC93Q567U6 631 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 CASP14P31944 242 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 PSMC2P35998 433 aaKnown RBP13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 CDC37Q16543 378 aaPredicted RBP13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 CCHCR1Q8TD31 782 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 LRFN2Q9ULH4 789 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 ORC6Q9Y5N6 252 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 EVI5O60447 810 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 ALCAMQ13740 583 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 MESDQ14696 234 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 MAP4K1Q92918 833 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 PNMA6FA0A0J9YX94 578 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 WDR64B1ANS9 1081 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 PGRMC1O00264 195 aaKnown RBP13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 PDE1BQ01064 536 aa13.34□□□□□ -0.27
KCNQ3-201ENST00000388996 KIAA1841Q6NSI8 718 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms