RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 PIP4K2BP78356 416 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ZNF200P98182 395 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 TMEM62Q0P6H9 643 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 FOXI1Q12951 378 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 KRT72Q14CN4 511 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 TWIST1Q15672 202 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 FAM189A2Q15884 450 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 INF2Q27J81 1249 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 FAM214AQ32MH5 1076 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 PRR31Q5SQ13 230 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 CC2D2BQ6DHV5 1058 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 DHX30Q7L2E3 1194 aaKnown RBP eCLIP-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 USP17L1Q7RTZ2 530 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 LINC00612Q8N6U2 182 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 WDSUB1Q8N9V3 476 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ARMC2Q8NEN0 867 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 PROKR1Q8TCW9 393 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 HERVK_113Q902F9 699 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ZBTB8AQ96BR9 441 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 HIC2Q96JB3 615 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ATOH8Q96SQ7 321 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 MEIS3Q99687 375 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ADAM2Q99965 735 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 OSBPL3Q9H4L5 887 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 RETNQ9HD89 108 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ZFATQ9P243 1243 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 GTF2IRD1Q9UHL9 959 aa-1.36□□□□□ -2.63
RNU6-1340P-201ENST00000384438 LOC102724428A0A0B4J2F2 783 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SRRM4A7MD48 611 aaKnown RBP-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 KRTAP16-1A8MUX0 517 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 J3QW42 95 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 DPYSL4O14531 572 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 HOXA2O43364 376 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 KDM4AO75164 1064 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 HKR1P10072 659 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ARSAP15289 507 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 PDE4AP27815 886 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 CDC25BP30305 580 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 HIBADHP31937 336 aaKnown RBP-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 PXNP49023 591 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SIK1P57059 783 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 TYRO3Q06418 890 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 TNK2Q07912 1038 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 MFSD10Q14728 455 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ZNF169Q14929 603 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SF3A2Q15428 464 aaKnown RBP-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ZNF324BQ6AW86 544 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 TMEM64Q6YI46 380 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 KBTBD2Q8IY47 623 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 LILRA3Q8N6C8 439 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 LINC00476Q8WZB0 136 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 DPF2Q92785 391 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 UBE2FQ969M7 185 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 C1orf159Q96HA4 380 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 NIFKQ9BYG3 293 aaKnown RBP-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 RBM12Q9NTZ6 932 aaKnown RBP-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 KAT6AQ92794 2004 aa-1.37□□□□□ -2.63
RNU6-1340P-201ENST00000384438 STAB2Q8WWQ8 2551 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ACANP16112 2415 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 RSPH10B2B2RC85 870 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 RIOK3O14730 519 aaKnown RBP-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SEMA3EO15041 775 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SRGAP3O43295 1099 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 UGDHO60701 494 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SCAF4O95104 1147 aaKnown RBP-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 APOHP02749 345 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 RSPH10BP0C881 870 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 HOXD3P31249 432 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 MC3RP41968 323 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SEC24CP53992 1094 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 USP46P62068 366 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 CCINQ13939 588 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 RAB3GAP1Q15042 981 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SF1Q15637 639 aaKnown RBP-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 MEX3BQ6ZN04 569 aaKnown RBP-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 BICDL1Q6ZP65 573 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 DYMQ7RTS9 669 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 TAX1BP1Q86VP1 789 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SULF1Q8IWU6 871 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SEPT12Q8IYM1 358 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ANKS4BQ8N8V4 417 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 GIMAP8Q8ND71 665 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 TMEM52Q8NDY8 209 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 CAGE1Q8TC20 777 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 LINC01599Q8WXQ3 324 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 RNF25Q96BH1 459 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 FOXRED1Q96CU9 486 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 C16orf92Q96LL3 132 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ZPBPQ9BS86 351 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 KIAA1683Q9H0B3 1180 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 CYP4F11Q9HBI6 524 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 ANAPC11Q9NYG5 84 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 SELENONQ9NZV5 590 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 NYAP2Q9P242 653 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 LPAP08519 4548 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 WDR81Q562E7 1941 aa-1.38□□□□□ -2.63
RNU6-1340P-201ENST00000384438 IGF2RP11717 2491 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 GNAT3A8MTJ3 354 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 H0Y858 1186 aa-1.39□□□□□ -2.63
RNU6-1340P-201ENST00000384438 J3QKU1 62 aa-1.39□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms