RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 CLSTN1O94985 981 aa20.81■□□□□ 0.92
SMARCD1-201ENST00000381513 SHBGP04278 402 aa20.81■□□□□ 0.92
SMARCD1-201ENST00000381513 ITIH4Q14624 930 aa20.81■□□□□ 0.92
SMARCD1-201ENST00000381513 LONP2Q86WA8 852 aa20.81■□□□□ 0.92
SMARCD1-201ENST00000381513 CRACR2BQ8N4Y2 399 aaPredicted RBP20.81■□□□□ 0.92
SMARCD1-201ENST00000381513 FBF1Q8TES7 1133 aa20.81■□□□□ 0.92
SMARCD1-201ENST00000381513 PRMT1Q99873 361 aaKnown RBP20.81■□□□□ 0.92
SMARCD1-201ENST00000381513 NSRP1Q9H0G5 558 aaKnown RBP20.81■□□□□ 0.92
SMARCD1-201ENST00000381513 DAPK3O43293 454 aa20.81■□□□□ 0.92
SMARCD1-201ENST00000381513 CUL1Q13616 776 aa20.81■□□□□ 0.92
SMARCD1-201ENST00000381513 SGMS1Q86VZ5 419 aa20.81■□□□□ 0.92
SMARCD1-201ENST00000381513 IFT74Q96LB3 600 aa20.81■□□□□ 0.92
SMARCD1-201ENST00000381513 PPP1R12CQ9BZL4 782 aa20.81■□□□□ 0.92
SMARCD1-201ENST00000381513 MAP3K13O43283 966 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 TUBP50607 506 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 WTAPQ15007 396 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 SEPT2Q15019 361 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 GORASP1Q9BQQ3 440 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 DDX47Q9H0S4 455 aaKnown RBP20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 LRRC4CQ9HCJ2 640 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 TRIM33Q9UPN9 1127 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 A0A0G2JS52 829 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 LRRC53A6NM62 1247 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 SART1O43290 800 aaKnown RBP20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 TCIRG1Q13488 830 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 PDXDC2PQ6P474 469 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 TMEM154Q6P9G4 183 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 TEX9Q8N6V9 391 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 ADAM22Q9P0K1 906 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 MRC1P22897 1456 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 EYA2O00167 538 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 EPHB6O15197 1021 aa20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 NPM1P06748 294 aaKnown RBP eCLIP20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.8■□□□□ 0.92
SMARCD1-201ENST00000381513 BMP15O95972 392 aa20.79■□□□□ 0.92
SMARCD1-201ENST00000381513 FAM81AQ8TBF8 368 aa20.79■□□□□ 0.92
SMARCD1-201ENST00000381513 DLGAP2Q9P1A6 1054 aa20.79■□□□□ 0.92
SMARCD1-201ENST00000381513 RARAP10276 462 aa20.79■□□□□ 0.92
SMARCD1-201ENST00000381513 ARID5AQ03989 594 aa20.79■□□□□ 0.92
SMARCD1-201ENST00000381513 ANO7Q6IWH7 933 aa20.79■□□□□ 0.92
SMARCD1-201ENST00000381513 USP38Q8NB14 1042 aa20.79■□□□□ 0.92
SMARCD1-201ENST00000381513 ZNF317Q96PQ6 595 aaPredicted RBP20.79■□□□□ 0.92
SMARCD1-201ENST00000381513 MYH13Q9UKX3 1938 aa20.79■□□□□ 0.92
SMARCD1-201ENST00000381513 ASAP2O43150 1006 aa20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 NUGGCQ68CJ6 796 aa20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 UHMK1Q8TAS1 419 aaKnown RBP20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 MTFR1LQ9H019 292 aa20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 ROBO2Q9HCK4 1378 aa20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 ALADP13716 330 aa20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 RAD23BP54727 409 aa20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 CDK17Q00537 523 aa20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 MGARPQ8TDB4 240 aa20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 NLRC4Q9NPP4 1024 aa20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 AFF2P51816 1311 aa20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 LIFRP42702 1097 aa20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 MRPS35P82673 323 aaKnown RBP20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 CCDC57Q2TAC2 916 aa20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 RPS6KC1Q96S38 1066 aa20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 SYT15Q9BQS2 421 aa20.78■□□□□ 0.92
SMARCD1-201ENST00000381513 GRID2IPA4D2P6 1211 aa20.77■□□□□ 0.92
SMARCD1-201ENST00000381513 GBP1P32455 592 aa20.77■□□□□ 0.92
SMARCD1-201ENST00000381513 RNF220Q5VTB9 566 aa20.77■□□□□ 0.92
SMARCD1-201ENST00000381513 MTHFD1LQ6UB35 978 aa20.77■□□□□ 0.92
SMARCD1-201ENST00000381513 TANGO6Q9C0B7 1094 aa20.77■□□□□ 0.92
SMARCD1-201ENST00000381513 NAPBQ9H115 298 aa20.77■□□□□ 0.92
SMARCD1-201ENST00000381513 NKRFO15226 690 aaKnown RBP eCLIP20.77■□□□□ 0.92
SMARCD1-201ENST00000381513 ALDH3A1P30838 453 aa20.77■□□□□ 0.92
SMARCD1-201ENST00000381513 COPS2P61201 443 aa20.77■□□□□ 0.92
SMARCD1-201ENST00000381513 PIGWQ7Z7B1 504 aa20.77■□□□□ 0.92
SMARCD1-201ENST00000381513 FAM114A1Q8IWE2 563 aa20.77■□□□□ 0.92
SMARCD1-201ENST00000381513 STAG2Q8N3U4 1231 aa20.77■□□□□ 0.92
SMARCD1-201ENST00000381513 GOLPH3Q9H4A6 298 aa20.77■□□□□ 0.92
SMARCD1-201ENST00000381513 CWC25Q9NXE8 425 aaPredicted RBP20.77■□□□□ 0.92
SMARCD1-201ENST00000381513 AMACRQ9UHK6 382 aa20.77■□□□□ 0.92
SMARCD1-201ENST00000381513 H0Y3Z8 333 aa20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 ECHS1P30084 290 aa20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 RFC5P40937 340 aa20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 HOOK3Q86VS8 718 aa20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 RBM41Q96IZ5 413 aaKnown RBP20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 KCNMB3Q9NPA1 279 aa20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 RPS6KA1Q15418 735 aa20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 TTI2Q6NXR4 508 aa20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 RNF10Q8N5U6 811 aaKnown RBP20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 INPP4AQ96PE3 977 aaPredicted RBP20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 RAB17Q9H0T7 212 aa20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 GPR108Q9NPR9 543 aa20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 PNMA3Q9UL41 463 aa20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 PTPRUQ92729 1446 aa20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 CNGA1P29973 690 aa20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 CCDC38Q502W7 563 aa20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 LUC7LQ9NQ29 371 aaKnown RBP20.76■□□□□ 0.91
SMARCD1-201ENST00000381513 KLRC1P26715 233 aa20.75■□□□□ 0.91
SMARCD1-201ENST00000381513 PIK3AP1Q6ZUJ8 805 aa20.75■□□□□ 0.91
SMARCD1-201ENST00000381513 FANCBQ8NB91 859 aa20.75■□□□□ 0.91
SMARCD1-201ENST00000381513 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.75■□□□□ 0.91
SMARCD1-201ENST00000381513 ZMYND8Q9ULU4 1186 aaPredicted RBP20.75■□□□□ 0.91
SMARCD1-201ENST00000381513 F8VZ95 297 aa20.75■□□□□ 0.91
SMARCD1-201ENST00000381513 RGS16O15492 202 aaPredicted RBP20.75■□□□□ 0.91
SMARCD1-201ENST00000381513 ADAM9Q13443 819 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms