RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 UBE2OQ9C0C9 1292 aaKnown RBP18.46■□□□□ 0.55
SNRPB-201ENST00000381342 PRDM5Q9NQX1 630 aaPredicted RBP18.46■□□□□ 0.55
SNRPB-201ENST00000381342 GNEQ9Y223 722 aaKnown RBP18.46■□□□□ 0.55
SNRPB-201ENST00000381342 MRVI1Q9Y6F6 885 aa18.46■□□□□ 0.55
SNRPB-201ENST00000381342 CEP290O15078 2479 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 ALPK3Q96L96 1907 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 A0A1W2PQ45 241 aaPredicted RBP18.45■□□□□ 0.54
SNRPB-201ENST00000381342 A0A1W2PQY0 241 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 MYADML2A6NDP7 307 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 TXNP10599 105 aaKnown RBP18.45■□□□□ 0.54
SNRPB-201ENST00000381342 ACLYP53396 1101 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 GJA9P57773 515 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 ARHGAP4P98171 946 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 TRIM29Q14134 588 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 TTLL4Q14679 1199 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 LY6KQ17RY6 165 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 TRIM60Q495X7 471 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 DUSP28Q4G0W2 176 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 C1orf53Q5VUE5 145 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 KRT40Q6A162 431 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 MCTP2Q6DN12 878 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 GALNT17Q6IS24 598 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 XRRA1Q6P2D8 792 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 KLHDC9Q8NEP7 349 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 GDF15Q99988 308 aa18.45■□□□□ 0.54
SNRPB-201ENST00000381342 STAM2O75886 525 aa18.44■□□□□ 0.54
SNRPB-201ENST00000381342 MMP1P03956 469 aa18.44■□□□□ 0.54
SNRPB-201ENST00000381342 ITGB5P18084 799 aa18.44■□□□□ 0.54
SNRPB-201ENST00000381342 CST5P28325 142 aaPredicted RBP18.44■□□□□ 0.54
SNRPB-201ENST00000381342 MDM2Q00987 491 aaPredicted RBP18.44■□□□□ 0.54
SNRPB-201ENST00000381342 SEMA3FQ13275 785 aa18.44■□□□□ 0.54
SNRPB-201ENST00000381342 CUL4AQ13619 759 aa18.44■□□□□ 0.54
SNRPB-201ENST00000381342 SNX17Q15036 470 aa18.44■□□□□ 0.54
SNRPB-201ENST00000381342 GNPTABQ3T906 1256 aa18.44■□□□□ 0.54
SNRPB-201ENST00000381342 CCDC62Q6P9F0 684 aa18.44■□□□□ 0.54
SNRPB-201ENST00000381342 SNX21Q969T3 373 aa18.44■□□□□ 0.54
SNRPB-201ENST00000381342 C8orf76Q96K31 380 aa18.44■□□□□ 0.54
SNRPB-201ENST00000381342 UPF3AQ9H1J1 476 aaKnown RBP18.44■□□□□ 0.54
SNRPB-201ENST00000381342 DCDC2CA8MYV0 355 aa18.43■□□□□ 0.54
SNRPB-201ENST00000381342 DYNC1LI2O43237 492 aaPredicted RBP18.43■□□□□ 0.54
SNRPB-201ENST00000381342 SORBS3O60504 671 aa18.43■□□□□ 0.54
SNRPB-201ENST00000381342 ASGR1P07306 291 aa18.43■□□□□ 0.54
SNRPB-201ENST00000381342 GJB2P29033 226 aa18.43■□□□□ 0.54
SNRPB-201ENST00000381342 KRT2P35908 639 aa18.43■□□□□ 0.54
SNRPB-201ENST00000381342 FXR1P51114 621 aaKnown RBP eCLIP18.43■□□□□ 0.54
SNRPB-201ENST00000381342 NR5A1Q13285 461 aa18.43■□□□□ 0.54
SNRPB-201ENST00000381342 HSCBQ8IWL3 235 aa18.43■□□□□ 0.54
SNRPB-201ENST00000381342 OR6J1Q8NGC5 347 aa18.43■□□□□ 0.54
SNRPB-201ENST00000381342 CRYGNQ8WXF5 182 aa18.43■□□□□ 0.54
SNRPB-201ENST00000381342 PRO3102Q9H379 93 aa18.43■□□□□ 0.54
SNRPB-201ENST00000381342 SMC3Q9UQE7 1217 aa18.43■□□□□ 0.54
SNRPB-201ENST00000381342 Q9Y3F1 56 aa18.43■□□□□ 0.54
SNRPB-201ENST00000381342 UBIAD1Q9Y5Z9 338 aa18.43■□□□□ 0.54
SNRPB-201ENST00000381342 ELP1O95163 1332 aa18.43■□□□□ 0.54
SNRPB-201ENST00000381342 CTAGE5O15320 804 aa18.42■□□□□ 0.54
SNRPB-201ENST00000381342 FIBPO43427 364 aa18.42■□□□□ 0.54
SNRPB-201ENST00000381342 UBA1P22314 1058 aaKnown RBP18.42■□□□□ 0.54
SNRPB-201ENST00000381342 BEX3Q00994 111 aa18.42■□□□□ 0.54
SNRPB-201ENST00000381342 TLE2Q04725 743 aa18.42■□□□□ 0.54
SNRPB-201ENST00000381342 BRDTQ58F21 947 aaPredicted RBP18.42■□□□□ 0.54
SNRPB-201ENST00000381342 KRT25Q7Z3Z0 450 aa18.42■□□□□ 0.54
SNRPB-201ENST00000381342 NLRX1Q86UT6 975 aa18.42■□□□□ 0.54
SNRPB-201ENST00000381342 DIS3L2Q8IYB7 885 aaKnown RBP18.42■□□□□ 0.54
SNRPB-201ENST00000381342 CYP2W1Q8TAV3 490 aa18.42■□□□□ 0.54
SNRPB-201ENST00000381342 TBCKQ8TEA7 893 aa18.42■□□□□ 0.54
SNRPB-201ENST00000381342 BRMS1Q9HCU9 246 aa18.42■□□□□ 0.54
SNRPB-201ENST00000381342 DDX41Q9UJV9 622 aaKnown RBP18.42■□□□□ 0.54
SNRPB-201ENST00000381342 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.42■□□□□ 0.54
SNRPB-201ENST00000381342 MROH7Q68CQ1 1323 aa18.42■□□□□ 0.54
SNRPB-201ENST00000381342 CCDC194A0A1B0GVG4 234 aa18.41■□□□□ 0.54
SNRPB-201ENST00000381342 FAM205CA6NFA0 338 aa18.41■□□□□ 0.54
SNRPB-201ENST00000381342 NKRFO15226 690 aaKnown RBP eCLIP18.41■□□□□ 0.54
SNRPB-201ENST00000381342 PQBP1O60828 265 aaKnown RBP18.41■□□□□ 0.54
SNRPB-201ENST00000381342 CABYRO75952 493 aa18.41■□□□□ 0.54
SNRPB-201ENST00000381342 CLTBP09497 229 aa18.41■□□□□ 0.54
SNRPB-201ENST00000381342 ICAM3P32942 547 aa18.41■□□□□ 0.54
SNRPB-201ENST00000381342 SP2Q02086 613 aa18.41■□□□□ 0.54
SNRPB-201ENST00000381342 ARHGAP1Q07960 439 aa18.41■□□□□ 0.54
SNRPB-201ENST00000381342 MTMR1Q13613 665 aa18.41■□□□□ 0.54
SNRPB-201ENST00000381342 NONOQ15233 471 aaKnown RBP eCLIP18.41■□□□□ 0.54
SNRPB-201ENST00000381342 EARS2Q5JPH6 523 aaKnown RBP18.41■□□□□ 0.54
SNRPB-201ENST00000381342 TDHQ8IZJ6 230 aa18.41■□□□□ 0.54
SNRPB-201ENST00000381342 TNFRSF25Q93038 417 aa18.41■□□□□ 0.54
SNRPB-201ENST00000381342 GPRASP2Q96D09 838 aa18.41■□□□□ 0.54
SNRPB-201ENST00000381342 MXRA8Q9BRK3 442 aa18.41■□□□□ 0.54
SNRPB-201ENST00000381342 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
SNRPB-201ENST00000381342 A0A0U1RQG5 324 aaPredicted RBP18.4■□□□□ 0.54
SNRPB-201ENST00000381342 BTBD18B2RXH4 712 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 SPATA31C2B4DYI2 1134 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 FAM86B1E9PN63 330 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 TLR3O15455 904 aaKnown RBP18.4■□□□□ 0.54
SNRPB-201ENST00000381342 GGPS1O95749 300 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 GH1P01241 217 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 CYP3A4P08684 503 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 FAM86B2P0C5J1 330 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 ZNF76P36508 570 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 FSCN1Q16658 493 aaKnown RBP18.4■□□□□ 0.54
SNRPB-201ENST00000381342 INF2Q27J81 1249 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 CEP55Q53EZ4 464 aa18.4■□□□□ 0.54
SNRPB-201ENST00000381342 KCNV1Q6PIU1 500 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms