RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 BMP2KLQ5H9B9 411 aa8.96□□□□□ -0.98
FAM49A-201ENST00000381323 UPF3AQ9H1J1 476 aaKnown RBP8.96□□□□□ -0.98
FAM49A-201ENST00000381323 NKX2-4Q9H2Z4 354 aa8.96□□□□□ -0.98
FAM49A-201ENST00000381323 MTMR10Q9NXD2 777 aa8.96□□□□□ -0.98
FAM49A-201ENST00000381323 B4GALT4O60513 344 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 RFC2P35250 354 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 PTPN11Q06124 597 aaPredicted RBP8.95□□□□□ -0.98
FAM49A-201ENST00000381323 H3BRB1 525 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 PURAQ00577 322 aaKnown RBP8.95□□□□□ -0.98
FAM49A-201ENST00000381323 MTMR1Q13613 665 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 FAM160B1Q5W0V3 765 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 MAP4K1Q92918 833 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 CDX2Q99626 313 aaPredicted RBP8.95□□□□□ -0.98
FAM49A-201ENST00000381323 MAF1Q9H063 256 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 SEMA6BQ9H3T3 888 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 TUT1Q9H6E5 874 aaKnown RBP8.95□□□□□ -0.98
FAM49A-201ENST00000381323 RSPH10B2B2RC85 870 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 LPXNO60711 386 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 RSPH10BP0C881 870 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 MNX1P50219 401 aaPredicted RBP8.95□□□□□ -0.98
FAM49A-201ENST00000381323 JAKMIP3Q5VZ66 844 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 FAM126BQ8IXS8 530 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 CLEC4DQ8WXI8 215 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 MYH8P13535 1937 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 SMCO2A6NFE2 343 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 MMP3P08254 477 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 TAPT1Q6NXT6 567 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 LRRC8DQ7L1W4 858 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.95□□□□□ -0.98
FAM49A-201ENST00000381323 AFAP1L1Q8TED9 768 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 GPKOWQ92917 476 aaPredicted RBP eCLIP8.95□□□□□ -0.98
FAM49A-201ENST00000381323 BRF1Q92994 677 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 SLC26A6Q9BXS9 759 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 HDAC6Q9UBN7 1215 aa8.95□□□□□ -0.98
FAM49A-201ENST00000381323 MYO5AQ9Y4I1 1855 aaKnown RBP8.94□□□□□ -0.98
FAM49A-201ENST00000381323 CDKL5O76039 1030 aa8.94□□□□□ -0.98
FAM49A-201ENST00000381323 PPFIA1Q13136 1202 aa8.94□□□□□ -0.98
FAM49A-201ENST00000381323 XRRA1Q6P2D8 792 aa8.94□□□□□ -0.98
FAM49A-201ENST00000381323 ANKS1AQ92625 1134 aa8.94□□□□□ -0.98
FAM49A-201ENST00000381323 GNEQ9Y223 722 aaKnown RBP8.94□□□□□ -0.98
FAM49A-201ENST00000381323 GRXCR1A8MXD5 290 aa8.94□□□□□ -0.98
FAM49A-201ENST00000381323 SNX17Q15036 470 aa8.94□□□□□ -0.98
FAM49A-201ENST00000381323 SLC9A7Q96T83 725 aa8.94□□□□□ -0.98
FAM49A-201ENST00000381323 NOC4LQ9BVI4 516 aaKnown RBP8.94□□□□□ -0.98
FAM49A-201ENST00000381323 TBX21Q9UL17 535 aa8.94□□□□□ -0.98
FAM49A-201ENST00000381323 SNHG28P0DPA3 235 aa8.94□□□□□ -0.98
FAM49A-201ENST00000381323 NFX1Q12986 1120 aaKnown RBP8.94□□□□□ -0.98
FAM49A-201ENST00000381323 STK3Q13188 491 aa8.94□□□□□ -0.98
FAM49A-201ENST00000381323 TMEM132AQ24JP5 1023 aa8.94□□□□□ -0.98
FAM49A-201ENST00000381323 METTL13Q8N6R0 699 aa8.94□□□□□ -0.98
FAM49A-201ENST00000381323 MICAL1Q8TDZ2 1067 aa8.94□□□□□ -0.98
FAM49A-201ENST00000381323 SEPT1Q8WYJ6 367 aa8.94□□□□□ -0.98
FAM49A-201ENST00000381323 PALM3A6NDB9 673 aaPredicted RBP8.93□□□□□ -0.98
FAM49A-201ENST00000381323 SSRP1Q08945 709 aaKnown RBP8.93□□□□□ -0.98
FAM49A-201ENST00000381323 PGM5Q15124 567 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 UBE2SQ16763 222 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 ODR4Q5SWX8 454 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 MAP7D2Q96T17 732 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 MAD2L2Q9UI95 211 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 TMEM240Q5SV17 173 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 MCTP2Q6DN12 878 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 MTA3Q9BTC8 594 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 SPZ1Q9BXG8 430 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 C22orf23Q9BZE7 217 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 DDX41Q9UJV9 622 aaKnown RBP8.93□□□□□ -0.98
FAM49A-201ENST00000381323 CDK5RAP2Q96SN8 1893 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 LOC285556D6RIA3 1793 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 EMSYQ7Z589 1322 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 A6NJR5 290 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 TULP1O00294 542 aaPredicted RBP8.93□□□□□ -0.98
FAM49A-201ENST00000381323 LIFRP42702 1097 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 CCT2P78371 535 aaKnown RBP8.93□□□□□ -0.98
FAM49A-201ENST00000381323 METTL7BQ6UX53 244 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 PLA2G4DQ86XP0 818 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 SMARCAD1Q9H4L7 1026 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 RNF216Q9NWF9 866 aaPredicted RBP8.93□□□□□ -0.98
FAM49A-201ENST00000381323 SH2B2O14492 632 aaPredicted RBP8.93□□□□□ -0.98
FAM49A-201ENST00000381323 PLEKHA8P1O95397 391 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 RABGGTBP53611 331 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 BMS1Q14692 1282 aaKnown RBP8.93□□□□□ -0.98
FAM49A-201ENST00000381323 CELF3Q5SZQ8 465 aaKnown RBP8.93□□□□□ -0.98
FAM49A-201ENST00000381323 ABI1Q8IZP0 508 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 PPTC7Q8NI37 304 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 ERAP1Q9NZ08 941 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 PCDHA6Q9UN73 950 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 PCDHA8Q9Y5H6 950 aa8.93□□□□□ -0.98
FAM49A-201ENST00000381323 TMEM265A0A087WTH1 108 aa8.92□□□□□ -0.98
FAM49A-201ENST00000381323 CCDC194A0A1B0GVG4 234 aa8.92□□□□□ -0.98
FAM49A-201ENST00000381323 PTGS1P23219 599 aa8.92□□□□□ -0.98
FAM49A-201ENST00000381323 TMOD1P28289 359 aa8.92□□□□□ -0.98
FAM49A-201ENST00000381323 SAFBQ15424 915 aaKnown RBP eCLIP8.92□□□□□ -0.98
FAM49A-201ENST00000381323 PTPROQ16827 1216 aa8.92□□□□□ -0.98
FAM49A-201ENST00000381323 Q6ZUG5 572 aa8.92□□□□□ -0.98
FAM49A-201ENST00000381323 VSIG10LQ86VR7 867 aa8.92□□□□□ -0.98
FAM49A-201ENST00000381323 REXO1Q8N1G1 1221 aaKnown RBP8.92□□□□□ -0.98
FAM49A-201ENST00000381323 IFIH1Q9BYX4 1025 aaKnown RBP8.92□□□□□ -0.98
FAM49A-201ENST00000381323 PTPRFP10586 1907 aa8.92□□□□□ -0.98
FAM49A-201ENST00000381323 IER5Q5VY09 327 aa8.92□□□□□ -0.98
FAM49A-201ENST00000381323 MGAMO43451 1857 aa8.92□□□□□ -0.98
FAM49A-201ENST00000381323 FOXP2O15409 715 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms