RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 DDX41Q9UJV9 622 aaKnown RBP20.36■□□□□ 0.85
HMGN1-203ENST00000380748 RSPH10B2B2RC85 870 aa20.35■□□□□ 0.85
HMGN1-203ENST00000380748 RSPH10BP0C881 870 aa20.35■□□□□ 0.85
HMGN1-203ENST00000380748 THPOP40225 353 aa20.35■□□□□ 0.85
HMGN1-203ENST00000380748 SMAD2Q15796 467 aaKnown RBP20.35■□□□□ 0.85
HMGN1-203ENST00000380748 PLEKHG4Q58EX7 1191 aa20.35■□□□□ 0.85
HMGN1-203ENST00000380748 HERC4Q5GLZ8 1057 aaPredicted RBP20.35■□□□□ 0.85
HMGN1-203ENST00000380748 RRP12Q5JTH9 1297 aaKnown RBP20.35■□□□□ 0.85
HMGN1-203ENST00000380748 VPS53Q5VIR6 699 aa20.35■□□□□ 0.85
HMGN1-203ENST00000380748 DHX37Q8IY37 1157 aaKnown RBP20.35■□□□□ 0.85
HMGN1-203ENST00000380748 PPTC7Q8NI37 304 aa20.35■□□□□ 0.85
HMGN1-203ENST00000380748 SYTL5Q8TDW5 730 aaPredicted RBP20.35■□□□□ 0.85
HMGN1-203ENST00000380748 EMID1Q96A84 441 aaPredicted RBP20.35■□□□□ 0.85
HMGN1-203ENST00000380748 CPVLQ9H3G5 476 aa20.35■□□□□ 0.85
HMGN1-203ENST00000380748 COL4A6Q14031 1691 aa20.35■□□□□ 0.85
HMGN1-203ENST00000380748 UPP2O95045 317 aa20.34■□□□□ 0.85
HMGN1-203ENST00000380748 FGRP09769 529 aa20.34■□□□□ 0.85
HMGN1-203ENST00000380748 DLX2Q07687 328 aaPredicted RBP20.34■□□□□ 0.85
HMGN1-203ENST00000380748 STXBP2Q15833 593 aa20.34■□□□□ 0.85
HMGN1-203ENST00000380748 IER5LQ5T953 404 aa20.34■□□□□ 0.85
HMGN1-203ENST00000380748 NSUN6Q8TEA1 469 aaKnown RBP20.34■□□□□ 0.85
HMGN1-203ENST00000380748 TOP1MTQ969P6 601 aa20.34■□□□□ 0.85
HMGN1-203ENST00000380748 OSBPL7Q9BZF2 842 aa20.34■□□□□ 0.85
HMGN1-203ENST00000380748 CHMP4BQ9H444 224 aaKnown RBP20.34■□□□□ 0.85
HMGN1-203ENST00000380748 RALGAPA2Q2PPJ7 1873 aa20.33■□□□□ 0.85
HMGN1-203ENST00000380748 SNHG28P0DPA3 235 aa20.33■□□□□ 0.85
HMGN1-203ENST00000380748 CTC1Q2NKJ3 1217 aa20.33■□□□□ 0.85
HMGN1-203ENST00000380748 SERINC5Q86VE9 423 aa20.33■□□□□ 0.85
HMGN1-203ENST00000380748 RNF135Q8IUD6 432 aa20.33■□□□□ 0.85
HMGN1-203ENST00000380748 PI4K2BQ8TCG2 481 aa20.33■□□□□ 0.85
HMGN1-203ENST00000380748 RMDN3Q96TC7 470 aa20.33■□□□□ 0.85
HMGN1-203ENST00000380748 TCP11L1Q9NUJ3 509 aa20.33■□□□□ 0.85
HMGN1-203ENST00000380748 MYH7BA7E2Y1 1941 aa20.33■□□□□ 0.84
HMGN1-203ENST00000380748 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.32■□□□□ 0.84
HMGN1-203ENST00000380748 MBTPS2O43462 519 aa20.32■□□□□ 0.84
HMGN1-203ENST00000380748 SORBS3O60504 671 aa20.32■□□□□ 0.84
HMGN1-203ENST00000380748 GOLGA8HP0CJ92 632 aa20.32■□□□□ 0.84
HMGN1-203ENST00000380748 EIF2AK2P19525 551 aaKnown RBP20.32■□□□□ 0.84
HMGN1-203ENST00000380748 HYAL1Q12794 435 aa20.32■□□□□ 0.84
HMGN1-203ENST00000380748 LAMC2Q13753 1193 aa20.32■□□□□ 0.84
HMGN1-203ENST00000380748 IWS1Q96ST2 819 aa20.32■□□□□ 0.84
HMGN1-203ENST00000380748 POP1Q99575 1024 aaKnown RBP20.32■□□□□ 0.84
HMGN1-203ENST00000380748 UBA5Q9GZZ9 404 aa20.32■□□□□ 0.84
HMGN1-203ENST00000380748 MRVI1Q9Y6F6 885 aa20.32■□□□□ 0.84
HMGN1-203ENST00000380748 ZDBF2Q9HCK1 2354 aa20.32■□□□□ 0.84
HMGN1-203ENST00000380748 HOXD8P13378 290 aaPredicted RBP20.31■□□□□ 0.84
HMGN1-203ENST00000380748 CTNNB1P35222 781 aa20.31■□□□□ 0.84
HMGN1-203ENST00000380748 SEPT8Q92599 483 aa20.31■□□□□ 0.84
HMGN1-203ENST00000380748 EDAQ92838 391 aa20.31■□□□□ 0.84
HMGN1-203ENST00000380748 IFIH1Q9BYX4 1025 aaKnown RBP20.31■□□□□ 0.84
HMGN1-203ENST00000380748 DCTPP1Q9H773 170 aa20.31■□□□□ 0.84
HMGN1-203ENST00000380748 ZFHX2Q9C0A1 2572 aaPredicted RBP20.31■□□□□ 0.84
HMGN1-203ENST00000380748 ABCB11O95342 1321 aa20.3■□□□□ 0.84
HMGN1-203ENST00000380748 TTC41PQ6P2S7 1318 aa20.3■□□□□ 0.84
HMGN1-203ENST00000380748 NCK2O43639 380 aa20.3■□□□□ 0.84
HMGN1-203ENST00000380748 ST18O60284 1047 aa20.3■□□□□ 0.84
HMGN1-203ENST00000380748 GTF2F1P35269 517 aaKnown RBP eCLIP20.3■□□□□ 0.84
HMGN1-203ENST00000380748 PTPN5P54829 565 aa20.3■□□□□ 0.84
HMGN1-203ENST00000380748 CDC37Q16543 378 aaPredicted RBP20.3■□□□□ 0.84
HMGN1-203ENST00000380748 ARHGEF16Q5VV41 709 aa20.3■□□□□ 0.84
HMGN1-203ENST00000380748 OTUD7AQ8TE49 926 aaPredicted RBP20.3■□□□□ 0.84
HMGN1-203ENST00000380748 STXBP3O00186 592 aa20.29■□□□□ 0.84
HMGN1-203ENST00000380748 GRM6O15303 877 aa20.29■□□□□ 0.84
HMGN1-203ENST00000380748 TBX10O75333 385 aa20.29■□□□□ 0.84
HMGN1-203ENST00000380748 EIF3JO75822 258 aaKnown RBP20.29■□□□□ 0.84
HMGN1-203ENST00000380748 CSPG5O95196 566 aa20.29■□□□□ 0.84
HMGN1-203ENST00000380748 CTSHP09668 335 aa20.29■□□□□ 0.84
HMGN1-203ENST00000380748 SMAD4Q13485 552 aaKnown RBP20.29■□□□□ 0.84
HMGN1-203ENST00000380748 HSDL1Q3SXM5 330 aa20.29■□□□□ 0.84
HMGN1-203ENST00000380748 ATP6V0A1Q93050 837 aa20.29■□□□□ 0.84
HMGN1-203ENST00000380748 CACNA1HO95180 2353 aa20.28■□□□□ 0.84
HMGN1-203ENST00000380748 TMEM221A6NGB7 291 aa20.28■□□□□ 0.84
HMGN1-203ENST00000380748 M0R296 226 aa20.28■□□□□ 0.84
HMGN1-203ENST00000380748 LINC01565O15544 149 aa20.28■□□□□ 0.84
HMGN1-203ENST00000380748 NR3C2P08235 984 aa20.28■□□□□ 0.84
HMGN1-203ENST00000380748 LINC00271P0C7V0 271 aa20.28■□□□□ 0.84
HMGN1-203ENST00000380748 TCF15Q12870 199 aa20.28■□□□□ 0.84
HMGN1-203ENST00000380748 ALX1Q15699 326 aa20.28■□□□□ 0.84
HMGN1-203ENST00000380748 GPATCH4Q5T3I0 446 aaKnown RBP20.28■□□□□ 0.84
HMGN1-203ENST00000380748 C20orf194Q5TEA3 1177 aa20.28■□□□□ 0.84
HMGN1-203ENST00000380748 BMP8AQ7Z5Y6 402 aa20.28■□□□□ 0.84
HMGN1-203ENST00000380748 C16orf70Q9BSU1 422 aa20.28■□□□□ 0.84
HMGN1-203ENST00000380748 MAF1Q9H063 256 aa20.28■□□□□ 0.84
HMGN1-203ENST00000380748 PXMP2Q9NR77 195 aa20.28■□□□□ 0.84
HMGN1-203ENST00000380748 C17orf102A2RUQ5 167 aa20.27■□□□□ 0.84
HMGN1-203ENST00000380748 C5orf67F2Z3F1 127 aa20.27■□□□□ 0.84
HMGN1-203ENST00000380748 TREHO43280 583 aa20.27■□□□□ 0.84
HMGN1-203ENST00000380748 PPFIA4O75335 1185 aa20.27■□□□□ 0.84
HMGN1-203ENST00000380748 MYSM1Q5VVJ2 828 aa20.27■□□□□ 0.84
HMGN1-203ENST00000380748 TRIM67Q6ZTA4 783 aa20.27■□□□□ 0.84
HMGN1-203ENST00000380748 MCF2L2Q86YR7 1114 aa20.27■□□□□ 0.84
HMGN1-203ENST00000380748 FIBCD1Q8N539 461 aa20.27■□□□□ 0.84
HMGN1-203ENST00000380748 PBXIP1Q96AQ6 731 aa20.27■□□□□ 0.84
HMGN1-203ENST00000380748 IL17RAQ96F46 866 aa20.27■□□□□ 0.84
HMGN1-203ENST00000380748 SPATA33Q96N06 139 aa20.27■□□□□ 0.84
HMGN1-203ENST00000380748 TTC14Q96N46 770 aa20.27■□□□□ 0.84
HMGN1-203ENST00000380748 IGFLR1Q9H665 355 aa20.27■□□□□ 0.84
HMGN1-203ENST00000380748 SPTBN4Q9H254 2564 aa20.26■□□□□ 0.83
HMGN1-203ENST00000380748 RGS20O76081 388 aa20.26■□□□□ 0.83
HMGN1-203ENST00000380748 GGPS1O95749 300 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms