RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 USP17L10C9JJH3 530 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 TTI1O43156 1089 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 ARHGAP25P42331 645 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 TSPY1Q01534 308 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 MAN2A1Q16706 1144 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 RAD17O75943 681 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 CAPN2P17655 700 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 IGBP1P78318 339 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 LRRC63Q05C16 580 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 DRP2Q13474 957 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 MB21D1Q8N884 522 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 KATNAL1Q9BW62 490 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 ANKFY1Q9P2R3 1169 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 KIAA1024Q9UPX6 916 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 PDIA3P30101 505 aaKnown RBP7.79□□□□□ -1.16
CCDC171-201ENST00000380701 SEPT14Q6ZU15 432 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 MCUR1Q96AQ8 359 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 PPP1R12CQ9BZL4 782 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 ATP6V0A4Q9HBG4 840 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 TBC1D7Q9P0N9 293 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 SAR1BQ9Y6B6 198 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 USP17L15C9J2P7 530 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 USP17L13C9JLJ4 530 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 USP17L11C9JVI0 530 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 USP17L18D6R9N7 530 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 USP17L22D6RA61 530 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 USP17L17D6RBQ6 530 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 USP17L19D6RCP7 530 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 USP17L20D6RJB6 530 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 DPYSL4O14531 572 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 NNMTP40261 264 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 CRKP46108 304 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 ITKQ08881 620 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 USP17L24Q0WX57 530 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 KRT39Q6A163 491 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 CATSPER4Q7RTX7 472 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 TEX2Q8IWB9 1127 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 AFAP1L1Q8TED9 768 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 SLC38A10Q9HBR0 1119 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 DISC1Q9NRI5 854 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 PCDHB4Q9Y5E5 795 aa7.79□□□□□ -1.16
CCDC171-201ENST00000380701 A0A0D9SFI3 127 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 DLATP10515 647 aaKnown RBP7.78□□□□□ -1.16
CCDC171-201ENST00000380701 PTGDRQ13258 359 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 BRD3Q15059 726 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 DSTYKQ6XUX3 929 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 PNMA8AQ86V59 439 aaPredicted RBP7.78□□□□□ -1.16
CCDC171-201ENST00000380701 NME8Q8N427 588 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 MRFAP1L1Q96HT8 127 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 FAM207AQ9NSI2 230 aaPredicted RBP7.78□□□□□ -1.16
CCDC171-201ENST00000380701 FARP1Q9Y4F1 1045 aaPredicted RBP7.78□□□□□ -1.16
CCDC171-201ENST00000380701 PREX2Q70Z35 1606 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 ATF2P15336 505 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 PARK7Q99497 189 aaKnown RBP7.78□□□□□ -1.16
CCDC171-201ENST00000380701 RNF181Q9P0P0 153 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 DBNLQ9UJU6 430 aaKnown RBP7.78□□□□□ -1.16
CCDC171-201ENST00000380701 ATF5Q9Y2D1 282 aaPredicted RBP7.78□□□□□ -1.16
CCDC171-201ENST00000380701 TTLL3Q9Y4R7 772 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 HOXC6P09630 235 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 RNF219Q5W0B1 726 aaPredicted RBP7.78□□□□□ -1.16
CCDC171-201ENST00000380701 BEST2Q8NFU1 509 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 LPAR1Q92633 364 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 DNAJC5Q9H3Z4 198 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 ACAD9Q9H845 621 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 DIS3Q9Y2L1 958 aaKnown RBP7.78□□□□□ -1.16
CCDC171-201ENST00000380701 STK36Q9NRP7 1315 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 IKBKBO14920 756 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 MTX1Q13505 466 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 ALX1Q15699 326 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 CTAGE3PQ8IX95 158 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 TTLL11Q8NHH1 800 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 SLFN14P0C7P3 912 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 FCER1AP12319 257 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 CDK8P49336 464 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 GKAP1Q5VSY0 366 aaPredicted RBP7.78□□□□□ -1.16
CCDC171-201ENST00000380701 SESTD1Q86VW0 696 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 SH3TC2Q8TF17 1288 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 P2RX5Q93086 422 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 NCOA3Q9Y6Q9 1424 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 K7ERI5 159 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 TRAPPC3O43617 180 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 RHOXF2BP0C7M4 288 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 NR2F2P24468 414 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 ADCY8P40145 1251 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 MXI1P50539 228 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 TSNAXIP1Q2TAA8 658 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 VSIG1Q86XK7 387 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 HOMEZQ8IX15 550 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 SYNE4Q8N205 404 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 ACAP3Q96P50 834 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 RHOXF2Q9BQY4 288 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 CBX8Q9HC52 389 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 STRIP2Q9ULQ0 834 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 ANGPTL3Q9Y5C1 460 aa7.78□□□□□ -1.16
CCDC171-201ENST00000380701 KIF28PB7ZC32 967 aa7.77□□□□□ -1.17
CCDC171-201ENST00000380701 MCF2LO15068 1137 aa7.77□□□□□ -1.17
CCDC171-201ENST00000380701 TET3O43151 1660 aa7.77□□□□□ -1.17
CCDC171-201ENST00000380701 TBC1D8O95759 1140 aa7.77□□□□□ -1.17
CCDC171-201ENST00000380701 ZNF853P0CG23 659 aa7.77□□□□□ -1.17
CCDC171-201ENST00000380701 RAD51Q06609 339 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms