RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 TBC1D12O60347 775 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 CIITAP33076 1130 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 BAG6P46379 1132 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 ERVK-24P63145 666 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 ELF2Q15723 593 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 ECM1Q16610 540 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 FIGNQ5HY92 759 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 MYOCDQ8IZQ8 938 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 MTMR14Q8NCE2 650 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 CHURC1Q8WUH1 139 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 ERGIC2Q96RQ1 377 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 LZTFL1Q9NQ48 299 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 PANK4Q9NVE7 773 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 MYO1AQ9UBC5 1043 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.03□□□□□ -0.16
VPS16-202ENST00000380445 V9GYY5 206 aaPredicted RBP14.03□□□□□ -0.16
VPS16-202ENST00000380445 PLA2G4BP0C869 781 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 JAG1P78504 1218 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 TUBB2AQ13885 445 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 RRP1BQ14684 758 aaKnown RBP14.03□□□□□ -0.16
VPS16-202ENST00000380445 PRR16Q569H4 304 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 FAM83AQ86UY5 434 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 HPS3Q969F9 1004 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 DNAJC19Q96DA6 116 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 WDR24Q96S15 920 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 TUBB2BQ9BVA1 445 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 ZNRF3Q9ULT6 936 aa14.03□□□□□ -0.16
VPS16-202ENST00000380445 IRX3P78415 501 aaPredicted RBP14.02□□□□□ -0.16
VPS16-202ENST00000380445 MAP3K9P80192 1104 aa14.02□□□□□ -0.16
VPS16-202ENST00000380445 COASYQ13057 564 aa14.02□□□□□ -0.16
VPS16-202ENST00000380445 NIM1KQ8IY84 436 aa14.02□□□□□ -0.16
VPS16-202ENST00000380445 KCTD17Q8N5Z5 321 aa14.02□□□□□ -0.16
VPS16-202ENST00000380445 ETNPPLQ8TBG4 499 aa14.02□□□□□ -0.16
VPS16-202ENST00000380445 UBXN4Q92575 508 aa14.02□□□□□ -0.16
VPS16-202ENST00000380445 PCMTD1Q96MG8 357 aaPredicted RBP14.02□□□□□ -0.16
VPS16-202ENST00000380445 ZNF277Q9NRM2 450 aaPredicted RBP14.02□□□□□ -0.16
VPS16-202ENST00000380445 EPN1Q9Y6I3 576 aaPredicted RBP14.02□□□□□ -0.16
VPS16-202ENST00000380445 EFCAB8A8MWE9 144 aa14.02□□□□□ -0.17
VPS16-202ENST00000380445 RNF225M0QZC1 329 aaPredicted RBP14.02□□□□□ -0.17
VPS16-202ENST00000380445 SSBP05455 408 aaKnown RBP eCLIP14.02□□□□□ -0.17
VPS16-202ENST00000380445 CYP3A4P08684 503 aa14.02□□□□□ -0.17
VPS16-202ENST00000380445 SNAP25P60880 206 aa14.02□□□□□ -0.17
VPS16-202ENST00000380445 MAN2A1Q16706 1144 aa14.02□□□□□ -0.17
VPS16-202ENST00000380445 FAM26FQ5R3K3 315 aa14.02□□□□□ -0.17
VPS16-202ENST00000380445 CCDC84Q86UT8 332 aaPredicted RBP14.02□□□□□ -0.17
VPS16-202ENST00000380445 SPICE1Q8N0Z3 855 aa14.02□□□□□ -0.17
VPS16-202ENST00000380445 KIFC2Q96AC6 838 aa14.02□□□□□ -0.17
VPS16-202ENST00000380445 OGFRQ9NZT2 677 aa14.02□□□□□ -0.17
VPS16-202ENST00000380445 ZBTB21Q9ULJ3 1066 aa14.02□□□□□ -0.17
VPS16-202ENST00000380445 PITPNM2Q9BZ72 1349 aa14.02□□□□□ -0.17
VPS16-202ENST00000380445 A0A1W2PQJ5 194 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 PLA2G6O60733 806 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 ZNF76P36508 570 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 ZBED6P86452 979 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 VWA3BQ502W6 1294 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 MIIPQ5JXC2 388 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 GJA10Q969M2 543 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 VEZTQ9HBM0 779 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 E9PMD0 336 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 FANCGO15287 622 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 NDUFA10O95299 355 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 DPEP1P16444 411 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 RPA1P27694 616 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 ECE1P42892 770 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 FKBP3Q00688 224 aaKnown RBP14.01□□□□□ -0.17
VPS16-202ENST00000380445 ERCC6LQ2NKX8 1250 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 EHMT1Q9H9B1 1298 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 MRFAP1Q9Y605 127 aa14.01□□□□□ -0.17
VPS16-202ENST00000380445 POTEB3A0JP26 581 aa14□□□□□ -0.17
VPS16-202ENST00000380445 POTECB2RU33 542 aa14□□□□□ -0.17
VPS16-202ENST00000380445 KCNA3P22001 575 aa14□□□□□ -0.17
VPS16-202ENST00000380445 BRD2P25440 801 aaKnown RBP14□□□□□ -0.17
VPS16-202ENST00000380445 KRT83P78385 493 aa14□□□□□ -0.17
VPS16-202ENST00000380445 GABPB1Q06547 395 aaPredicted RBP14□□□□□ -0.17
VPS16-202ENST00000380445 MEA1Q16626 185 aa14□□□□□ -0.17
VPS16-202ENST00000380445 POTEBQ6S5H4 581 aa14□□□□□ -0.17
VPS16-202ENST00000380445 FAM160B2Q86V87 743 aa14□□□□□ -0.17
VPS16-202ENST00000380445 GPBP1Q86WP2 473 aa14□□□□□ -0.17
VPS16-202ENST00000380445 DHX37Q8IY37 1157 aaKnown RBP14□□□□□ -0.17
VPS16-202ENST00000380445 EEF2KMTQ96G04 330 aa14□□□□□ -0.17
VPS16-202ENST00000380445 TTYH3Q9C0H2 523 aa14□□□□□ -0.17
VPS16-202ENST00000380445 NDST4Q9H3R1 872 aa14□□□□□ -0.17
VPS16-202ENST00000380445 DNM3Q9UQ16 869 aa14□□□□□ -0.17
VPS16-202ENST00000380445 CNTNAP1P78357 1384 aa14□□□□□ -0.17
VPS16-202ENST00000380445 CCDC66A2RUB6 948 aa14□□□□□ -0.17
VPS16-202ENST00000380445 IPO7O95373 1038 aaKnown RBP14□□□□□ -0.17
VPS16-202ENST00000380445 KRT18P05783 430 aaKnown RBP14□□□□□ -0.17
VPS16-202ENST00000380445 CHRM1P11229 460 aaPredicted RBP14□□□□□ -0.17
VPS16-202ENST00000380445 CYLC1P35663 651 aaPredicted RBP14□□□□□ -0.17
VPS16-202ENST00000380445 SLC20A2Q08357 652 aa14□□□□□ -0.17
VPS16-202ENST00000380445 CCDC170Q8IYT3 715 aa14□□□□□ -0.17
VPS16-202ENST00000380445 ACRBPQ8NEB7 543 aa14□□□□□ -0.17
VPS16-202ENST00000380445 CARD6Q9BX69 1037 aa14□□□□□ -0.17
VPS16-202ENST00000380445 VCPKMTQ9H867 229 aa14□□□□□ -0.17
VPS16-202ENST00000380445 ZBTB12Q9Y330 459 aaPredicted RBP14□□□□□ -0.17
VPS16-202ENST00000380445 FAM86B1E9PN63 330 aa14□□□□□ -0.17
VPS16-202ENST00000380445 MED24O75448 989 aa14□□□□□ -0.17
VPS16-202ENST00000380445 GNA14O95837 355 aa14□□□□□ -0.17
VPS16-202ENST00000380445 FAM86B2P0C5J1 330 aa14□□□□□ -0.17
VPS16-202ENST00000380445 SPIRE1Q08AE8 756 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms