RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 PLCB1Q9NQ66 1216 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 ABHD10Q9NUJ1 306 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 LRP2BPQ9P2M1 347 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 TRIM10Q9UDY6 481 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 TRPC5Q9UL62 973 aaPredicted RBP7.21□□□□□ -1.26
RIPK1-202ENST00000380409 ZMYND8Q9ULU4 1186 aaPredicted RBP7.21□□□□□ -1.26
RIPK1-202ENST00000380409 CEP131Q9UPN4 1083 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 ANKRD62A6NC57 917 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 RNF225M0QZC1 329 aaPredicted RBP7.21□□□□□ -1.26
RIPK1-202ENST00000380409 TEX33O43247 280 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 ALDH1L1O75891 902 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 PDGFRBP09619 1106 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 PRLRP16471 622 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 SMARCA1P28370 1054 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 CASP14P31944 242 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 KRT9P35527 623 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 USP46P62068 366 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 TIMM10P62072 90 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 TAF11Q15544 211 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 STKLD1Q8NE28 680 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 ASAP3Q8TDY4 903 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 GATA6Q92908 595 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 FGD4Q96M96 766 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 SMC6Q96SB8 1091 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 STIM2Q9P246 746 aa7.21□□□□□ -1.26
RIPK1-202ENST00000380409 NKX1-2Q9UD57 310 aaPredicted RBP7.21□□□□□ -1.26
RIPK1-202ENST00000380409 PEAK1Q9H792 1746 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 CHL1O00533 1208 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 KRT16P08779 473 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 CYP4A11Q02928 519 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 CNPY1Q3B7I2 92 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 ERMARDQ5T6L9 678 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 MICU3Q86XE3 530 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 TMTC1Q8IUR5 882 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 ARL10Q8N8L6 244 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 UTP4Q969X6 686 aaKnown RBP7.2□□□□□ -1.26
RIPK1-202ENST00000380409 FAM227BQ96M60 508 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 THRAP3Q9Y2W1 955 aaKnown RBP7.2□□□□□ -1.26
RIPK1-202ENST00000380409 TIMM22Q9Y584 194 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 CLIC4Q9Y696 253 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 ATAD5Q96QE3 1844 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 ROBO1Q9Y6N7 1651 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 MYH4Q9Y623 1939 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 KIF13BQ9NQT8 1826 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 A0A0J9YVX5 310 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 GRM8O00222 908 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 EIF3FO00303 357 aaPredicted RBP7.2□□□□□ -1.26
RIPK1-202ENST00000380409 PEX11AO75192 247 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 FLOT1O75955 427 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 FAM153BP0C7A2 387 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 NAT2P11245 290 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 RXRAP19793 462 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 GSTT1P30711 240 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 PAK2Q13177 524 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 FAM153CQ494X1 144 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 SMUG1Q53HV7 270 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 TTC30AQ86WT1 665 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 SH3TC2Q8TF17 1288 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 MAML3Q96JK9 1138 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 NEK1Q96PY6 1258 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 FAM153AQ9UHL3 310 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 ZNF142P52746 1687 aaPredicted RBP7.2□□□□□ -1.26
RIPK1-202ENST00000380409 ZNF185O15231 689 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 STIP1P31948 543 aaKnown RBP7.2□□□□□ -1.26
RIPK1-202ENST00000380409 ZNF131P52739 623 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 BNIP1Q12981 228 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 MORC3Q14149 939 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 GKAP1Q5VSY0 366 aaPredicted RBP7.2□□□□□ -1.26
RIPK1-202ENST00000380409 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.2□□□□□ -1.26
RIPK1-202ENST00000380409 CPLX3Q8WVH0 158 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 ATXN2LQ8WWM7 1075 aaKnown RBP7.2□□□□□ -1.26
RIPK1-202ENST00000380409 DHTKD1Q96HY7 919 aaPredicted RBP7.2□□□□□ -1.26
RIPK1-202ENST00000380409 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.2□□□□□ -1.26
RIPK1-202ENST00000380409 CCDC28BQ9BUN5 200 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 FAM129AQ9BZQ8 928 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 LNPEPQ9UIQ6 1025 aa7.2□□□□□ -1.26
RIPK1-202ENST00000380409 BTBD19C9JJ37 291 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 ENC1O14682 589 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 PIM1P11309 404 aaPredicted RBP7.19□□□□□ -1.26
RIPK1-202ENST00000380409 KLC1Q07866 573 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 UAP1Q16222 522 aaPredicted RBP7.19□□□□□ -1.26
RIPK1-202ENST00000380409 CFAP58Q5T655 872 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 AGBL2Q5U5Z8 902 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 TMEM154Q6P9G4 183 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 LDHAL6AQ6ZMR3 332 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 CNGA4Q8IV77 575 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 ANKS4BQ8N8V4 417 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 EIF1ADQ8N9N8 165 aaKnown RBP7.19□□□□□ -1.26
RIPK1-202ENST00000380409 AIDAQ96BJ3 306 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 GJD4Q96KN9 370 aaPredicted RBP7.19□□□□□ -1.26
RIPK1-202ENST00000380409 SPATA16Q9BXB7 569 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 HAUS4Q9H6D7 363 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 STK32BQ9NY57 414 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 HMG20BQ9P0W2 317 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 KLHL42Q9P2K6 505 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 ITGB1BP2Q9UKP3 347 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 SH3GLB1Q9Y371 365 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 SPO11Q9Y5K1 396 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 CAPN6Q9Y6Q1 641 aa7.19□□□□□ -1.26
RIPK1-202ENST00000380409 KDM3BQ7LBC6 1761 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms