RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SLC39A2Q9NP94 309 aa22.18■■□□□ 1.14
PDLIM5-205ENST00000380180 ADARB2Q9NS39 739 aaKnown RBP22.18■■□□□ 1.14
PDLIM5-205ENST00000380180 PITPNM2Q9BZ72 1349 aa22.18■■□□□ 1.14
PDLIM5-205ENST00000380180 TEX33O43247 280 aa22.18■■□□□ 1.14
PDLIM5-205ENST00000380180 RPA1P27694 616 aa22.18■■□□□ 1.14
PDLIM5-205ENST00000380180 HMGCS2P54868 508 aa22.18■■□□□ 1.14
PDLIM5-205ENST00000380180 PRKG1Q13976 671 aa22.18■■□□□ 1.14
PDLIM5-205ENST00000380180 CEP55Q53EZ4 464 aa22.18■■□□□ 1.14
PDLIM5-205ENST00000380180 MCF2L2Q86YR7 1114 aa22.18■■□□□ 1.14
PDLIM5-205ENST00000380180 COL20A1Q9P218 1284 aa22.18■■□□□ 1.14
PDLIM5-205ENST00000380180 LIMA1Q9UHB6 759 aaKnown RBP22.18■■□□□ 1.14
PDLIM5-205ENST00000380180 POTEFA5A3E0 1075 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 LRRC10BA6NIK2 292 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 SOCS7O14512 581 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 ZBED4O75132 1171 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 SSBP05455 408 aaKnown RBP eCLIP22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 PLA2G4BP0C869 781 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 POTEIP0CG38 1075 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 SPATA31C1P0DKV0 1188 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 IDEP14735 1019 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 COBLL1Q53SF7 1204 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 MUM1L1Q5H9M0 696 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 SPECC1LQ69YQ0 1117 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 TTI2Q6NXR4 508 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 POTEGQ6S5H5 508 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 POTEEQ6S8J3 1075 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 DLK2Q6UY11 383 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 DNAJC19Q96DA6 116 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 HOMER2Q9NSB8 354 aa22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 CTDP1Q9Y5B0 961 aaPredicted RBP22.17■■□□□ 1.14
PDLIM5-205ENST00000380180 C19orf81C9J6K1 198 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 VWA5AO00534 786 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 USP2O75604 605 aaPredicted RBP22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 PPP1R2P41236 205 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 TBX2Q13207 712 aaPredicted RBP22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 KRT31Q15323 416 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 TCP11X2Q5H9J9 407 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 IRF2BP1Q8IU81 584 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 STK24Q9Y6E0 443 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 KCNJ18B7U540 433 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 CCNE1P24864 410 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 GHRHRQ02643 423 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 SPAG1Q07617 926 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 KCNJ12Q14500 433 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 FILIP1LQ4L180 1135 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 SLC30A10Q6XR72 485 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 CREBRFQ8IUR6 639 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 P2RX5Q93086 422 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 ATG4CQ96DT6 458 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 WNK4Q96J92 1243 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 TRIM47Q96LD4 638 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 C12orf42Q96LP6 360 aa22.16■■□□□ 1.14
PDLIM5-205ENST00000380180 EML1O00423 815 aa22.15■■□□□ 1.14
PDLIM5-205ENST00000380180 MEIS1O00470 390 aa22.15■■□□□ 1.14
PDLIM5-205ENST00000380180 FDX1P10109 184 aa22.15■■□□□ 1.14
PDLIM5-205ENST00000380180 EHHADHQ08426 723 aa22.15■■□□□ 1.14
PDLIM5-205ENST00000380180 NOL9Q5SY16 702 aaKnown RBP22.15■■□□□ 1.14
PDLIM5-205ENST00000380180 OTOP1Q7RTM1 612 aa22.15■■□□□ 1.14
PDLIM5-205ENST00000380180 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.15■■□□□ 1.141e-6■■■□□ 17.2
PDLIM5-205ENST00000380180 SLC5A5Q92911 643 aa22.15■■□□□ 1.14
PDLIM5-205ENST00000380180 SRRTQ9BXP5 876 aaKnown RBP22.15■■□□□ 1.14
PDLIM5-205ENST00000380180 BMP2KQ9NSY1 1161 aaPredicted RBP22.15■■□□□ 1.14
PDLIM5-205ENST00000380180 WDR90Q96KV7 1748 aa22.15■■□□□ 1.14
PDLIM5-205ENST00000380180 PTPRFP10586 1907 aa22.14■■□□□ 1.14
PDLIM5-205ENST00000380180 PSMD10O75832 226 aa22.14■■□□□ 1.14
PDLIM5-205ENST00000380180 PSMC6P62333 389 aa22.14■■□□□ 1.14
PDLIM5-205ENST00000380180 DNTTIP2Q5QJE6 756 aaKnown RBP22.14■■□□□ 1.14
PDLIM5-205ENST00000380180 LRCH2Q5VUJ6 765 aa22.14■■□□□ 1.14
PDLIM5-205ENST00000380180 C9orf131Q5VYM1 1079 aa22.14■■□□□ 1.14
PDLIM5-205ENST00000380180 ANKRD40Q6AI12 368 aa22.14■■□□□ 1.14
PDLIM5-205ENST00000380180 DUSP9Q99956 384 aaKnown RBP22.14■■□□□ 1.14
PDLIM5-205ENST00000380180 RPTORQ8N122 1335 aa22.14■■□□□ 1.13
PDLIM5-205ENST00000380180 BICDL2A1A5D9 508 aa22.14■■□□□ 1.13
PDLIM5-205ENST00000380180 ARP10275 920 aa22.14■■□□□ 1.13
PDLIM5-205ENST00000380180 GOLGA8FQ08AF8 430 aa22.14■■□□□ 1.13
PDLIM5-205ENST00000380180 GOLGA8DPQ0D2H9 430 aa22.14■■□□□ 1.13
PDLIM5-205ENST00000380180 PSMD2Q13200 908 aa22.14■■□□□ 1.13
PDLIM5-205ENST00000380180 GPBP1Q86WP2 473 aa22.14■■□□□ 1.13
PDLIM5-205ENST00000380180 ANKRD20A12PQ8NF67 263 aa22.14■■□□□ 1.13
PDLIM5-205ENST00000380180 DCPSQ96C86 337 aaKnown RBP22.14■■□□□ 1.13
PDLIM5-205ENST00000380180 TRERF1Q96PN7 1200 aa22.14■■□□□ 1.13
PDLIM5-205ENST00000380180 EIF2AK1Q9BQI3 630 aaKnown RBP22.14■■□□□ 1.13
PDLIM5-205ENST00000380180 THAP9Q9H5L6 903 aa22.14■■□□□ 1.13
PDLIM5-205ENST00000380180 PNMA2Q9UL42 364 aa22.14■■□□□ 1.13
PDLIM5-205ENST00000380180 RABGAP1Q9Y3P9 1069 aa22.14■■□□□ 1.13
PDLIM5-205ENST00000380180 AFG3L2Q9Y4W6 797 aa22.14■■□□□ 1.13
PDLIM5-205ENST00000380180 PBX1P40424 430 aa22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 COPB1P53618 953 aaKnown RBP22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 SLC12A3P55017 1021 aa22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 SYTL5Q8TDW5 730 aaPredicted RBP22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 MXRA8Q9BRK3 442 aa22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 POLR3CQ9BUI4 534 aaPredicted RBP22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 VPS16Q9H269 839 aa22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 PANK4Q9NVE7 773 aa22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 MAP3K20Q9NYL2 800 aaKnown RBP22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 DNM3Q9UQ16 869 aa22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 N4BP3O15049 544 aa22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 CYP11B2P19099 503 aa22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 SETQ01105 290 aaPredicted RBP22.13■■□□□ 1.13
PDLIM5-205ENST00000380180 CYP4A11Q02928 519 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms