RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SUPT20HQ8NEM7 779 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 KIAA1524Q8TCG1 905 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 CTNNBL1Q8WYA6 563 aaPredicted RBP8.99□□□□□ -0.97
CKAP2-203ENST00000378037 ATG4CQ96DT6 458 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 AGXT2Q9BYV1 514 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.99□□□□□ -0.97
CKAP2-203ENST00000378037 DUOX1Q9NRD9 1551 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 ANKRD36CQ5JPF3 1778 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 ACTN4O43707 911 aaKnown RBP8.99□□□□□ -0.97
CKAP2-203ENST00000378037 NPEPPSP55786 919 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 ADAM9Q13443 819 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 SEZ6Q53EL9 994 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 GPATCH4Q5T3I0 446 aaKnown RBP8.99□□□□□ -0.97
CKAP2-203ENST00000378037 PLA2G4FQ68DD2 849 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 RSBN1LQ6PCB5 846 aaPredicted RBP8.99□□□□□ -0.97
CKAP2-203ENST00000378037 CHP1Q99653 195 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 MYOZ2Q9NPC6 264 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.99□□□□□ -0.97
CKAP2-203ENST00000378037 SOCS7O14512 581 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 CCDC175P0C221 793 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 PLA2G4BP0C869 781 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 NR2F2P24468 414 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 NMT1P30419 496 aaKnown RBP8.99□□□□□ -0.97
CKAP2-203ENST00000378037 DPYDQ12882 1025 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 MTERF2Q49AM1 385 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 ODF2Q5BJF6 829 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 LDHDQ86WU2 507 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 DYDC2Q96IM9 177 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 RMDN3Q96TC7 470 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.99□□□□□ -0.97
CKAP2-203ENST00000378037 CSADQ9Y600 493 aa8.99□□□□□ -0.97
CKAP2-203ENST00000378037 ZSCAN12O43309 604 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 TRIM49P0CI25 452 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 TRIM49CP0CI26 452 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 COPB1P53618 953 aaKnown RBP8.98□□□□□ -0.97
CKAP2-203ENST00000378037 CCDC65Q8IXS2 484 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 CCDC150Q8NCX0 1101 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 CHURC1Q8WUH1 139 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 GPRC5CQ9NQ84 441 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.98□□□□□ -0.97
CKAP2-203ENST00000378037 ADM5C9JUS6 153 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 K7ENM7 598 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 GTPBP6O43824 516 aaPredicted RBP8.98□□□□□ -0.97
CKAP2-203ENST00000378037 SLC35G1Q2M3R5 365 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 SFR1Q86XK3 245 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 FAM178BQ8IXR5 827 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 NEK11Q8NG66 645 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 DCPSQ96C86 337 aaKnown RBP8.98□□□□□ -0.97
CKAP2-203ENST00000378037 CCDC17Q96LX7 622 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 RPAP3Q9H6T3 665 aaPredicted RBP8.98□□□□□ -0.97
CKAP2-203ENST00000378037 SMARCAL1Q9NZC9 954 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 SALL1Q9NSC2 1324 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 BAZ2AQ9UIF9 1905 aaKnown RBP8.98□□□□□ -0.97
CKAP2-203ENST00000378037 BRCA2P51587 3418 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 MYMKA6NI61 221 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 LRRIQ4A6NIV6 560 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 SMIM23A6NLE4 172 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 FXR1P51114 621 aaKnown RBP eCLIP8.98□□□□□ -0.97
CKAP2-203ENST00000378037 IL17AQ16552 155 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 ZNF394Q53GI3 561 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 MAP1SQ66K74 1059 aaPredicted RBP8.98□□□□□ -0.97
CKAP2-203ENST00000378037 HS2ST1Q7LGA3 356 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 RTKN2Q8IZC4 609 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 LSM14BQ9BX40 385 aaKnown RBP8.98□□□□□ -0.97
CKAP2-203ENST00000378037 AGPAT5Q9NUQ2 364 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 PACSIN2Q9UNF0 486 aaPredicted RBP8.98□□□□□ -0.97
CKAP2-203ENST00000378037 RABGAP1Q9Y3P9 1069 aa8.98□□□□□ -0.97
CKAP2-203ENST00000378037 MYH14Q7Z406 1995 aaKnown RBP8.98□□□□□ -0.97
CKAP2-203ENST00000378037 MYH2Q9UKX2 1941 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 NOP56O00567 594 aaKnown RBP8.97□□□□□ -0.97
CKAP2-203ENST00000378037 SEC31AO94979 1220 aaKnown RBP8.97□□□□□ -0.97
CKAP2-203ENST00000378037 KRT5P13647 590 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 ATP2C1P98194 919 aaPredicted RBP8.97□□□□□ -0.97
CKAP2-203ENST00000378037 BAATQ14032 418 aaPredicted RBP8.97□□□□□ -0.97
CKAP2-203ENST00000378037 HLTFQ14527 1009 aaKnown RBP eCLIP8.97□□□□□ -0.97
CKAP2-203ENST00000378037 PPP2R5BQ15173 497 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 SPATA1Q5VX52 437 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 ANKRD40Q6AI12 368 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 CCDC50Q8IVM0 306 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 MYOCDQ8IZQ8 938 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 DHX36Q9H2U1 1008 aaKnown RBP8.97□□□□□ -0.97
CKAP2-203ENST00000378037 HDAC6Q9UBN7 1215 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 SEPT9Q9UHD8 586 aaPredicted RBP8.97□□□□□ -0.97
CKAP2-203ENST00000378037 SPDYE2BA6NHP3 402 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 ZBED4O75132 1171 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 PGK2P07205 417 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 SPDYE6P0CI01 402 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 ACTN1P12814 892 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 KCNA1Q09470 495 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 GRIPAP1Q4V328 841 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 CNNM4Q6P4Q7 775 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 DNAH12Q6ZR08 3092 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 SH3BP5LQ7L8J4 393 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 RNF169Q8NCN4 708 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 FUCA2Q9BTY2 467 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 APOL6Q9BWW8 343 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 FAM107BQ9H098 131 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 MYO1AQ9UBC5 1043 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 PPP2R2CQ9Y2T4 447 aa8.97□□□□□ -0.97
CKAP2-203ENST00000378037 ARFGEF1Q9Y6D6 1849 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms