RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 CASKIN2Q8WXE0 1202 aa19.88■□□□□ 0.77
GNE-201ENST00000377902 GOLPH3Q9H4A6 298 aa19.88■□□□□ 0.77
GNE-201ENST00000377902 POLR2FP61218 127 aaKnown RBP19.88■□□□□ 0.77
GNE-201ENST00000377902 SKOR1P84550 965 aa19.88■□□□□ 0.77
GNE-201ENST00000377902 COA7Q96BR5 231 aa19.88■□□□□ 0.77
GNE-201ENST00000377902 CDK5RAP3Q96JB5 506 aa19.88■□□□□ 0.77
GNE-201ENST00000377902 MTMR9Q96QG7 549 aa19.88■□□□□ 0.77
GNE-201ENST00000377902 GDF3Q9NR23 364 aa19.88■□□□□ 0.77
GNE-201ENST00000377902 SEC24CP53992 1094 aa19.87■□□□□ 0.77
GNE-201ENST00000377902 CFAP58Q5T655 872 aa19.87■□□□□ 0.77
GNE-201ENST00000377902 IFT20Q8IY31 132 aa19.87■□□□□ 0.77
GNE-201ENST00000377902 GUF1Q8N442 669 aaKnown RBP19.87■□□□□ 0.77
GNE-201ENST00000377902 TBC1D5Q92609 795 aa19.87■□□□□ 0.77
GNE-201ENST00000377902 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.87■□□□□ 0.77
GNE-201ENST00000377902 FRMPD2Q68DX3 1309 aaPredicted RBP19.87■□□□□ 0.77
GNE-201ENST00000377902 LAMB2P55268 1798 aa19.87■□□□□ 0.77
GNE-201ENST00000377902 INPP5BP32019 993 aa19.87■□□□□ 0.77
GNE-201ENST00000377902 PPP1R2P41236 205 aa19.87■□□□□ 0.77
GNE-201ENST00000377902 COBLL1Q53SF7 1204 aa19.87■□□□□ 0.77
GNE-201ENST00000377902 FAM83BQ5T0W9 1011 aa19.87■□□□□ 0.77
GNE-201ENST00000377902 SOGA3Q5TF21 947 aa19.87■□□□□ 0.77
GNE-201ENST00000377902 REXO1Q8N1G1 1221 aaKnown RBP19.87■□□□□ 0.77
GNE-201ENST00000377902 GNA11P29992 359 aa19.86■□□□□ 0.77
GNE-201ENST00000377902 CACNB1Q02641 598 aaPredicted RBP19.86■□□□□ 0.77
GNE-201ENST00000377902 PDE4CQ08493 712 aa19.86■□□□□ 0.77
GNE-201ENST00000377902 KCNV1Q6PIU1 500 aa19.86■□□□□ 0.77
GNE-201ENST00000377902 MMS22LQ6ZRQ5 1243 aa19.86■□□□□ 0.77
GNE-201ENST00000377902 KLHL7Q8IXQ5 586 aa19.86■□□□□ 0.77
GNE-201ENST00000377902 MARCH10Q8NA82 808 aaPredicted RBP19.86■□□□□ 0.77
GNE-201ENST00000377902 LSM14BQ9BX40 385 aaKnown RBP19.86■□□□□ 0.77
GNE-201ENST00000377902 A0A087X0T9 212 aa19.86■□□□□ 0.77
GNE-201ENST00000377902 USP17L5A8MUK1 530 aa19.86■□□□□ 0.77
GNE-201ENST00000377902 TRAF5O00463 557 aa19.86■□□□□ 0.77
GNE-201ENST00000377902 LDHBP07195 334 aaKnown RBP19.86■□□□□ 0.77
GNE-201ENST00000377902 FAM228BP0C875 321 aa19.86■□□□□ 0.77
GNE-201ENST00000377902 GUCY2CP25092 1073 aa19.86■□□□□ 0.77
GNE-201ENST00000377902 NELFCDQ8IXH7 590 aa19.86■□□□□ 0.77
GNE-201ENST00000377902 SNX29Q8TEQ0 813 aa19.86■□□□□ 0.77
GNE-201ENST00000377902 ADAMTS1Q9UHI8 967 aa19.86■□□□□ 0.77
GNE-201ENST00000377902 HNRNPH1P31943 449 aaKnown RBP19.85■□□□□ 0.77
GNE-201ENST00000377902 RAD54LQ92698 747 aa19.85■□□□□ 0.77
GNE-201ENST00000377902 EYA3Q99504 573 aa19.85■□□□□ 0.77
GNE-201ENST00000377902 SPZ1Q9BXG8 430 aa19.85■□□□□ 0.77
GNE-201ENST00000377902 PVALEFA0A1B0GWK0 134 aa19.85■□□□□ 0.77
GNE-201ENST00000377902 MYO1FO00160 1098 aa19.85■□□□□ 0.77
GNE-201ENST00000377902 TNFRSF8P28908 595 aa19.85■□□□□ 0.77
GNE-201ENST00000377902 LSP1P33241 339 aa19.85■□□□□ 0.77
GNE-201ENST00000377902 DDB1Q16531 1140 aa19.85■□□□□ 0.77
GNE-201ENST00000377902 SLC9C1Q4G0N8 1177 aa19.85■□□□□ 0.77
GNE-201ENST00000377902 CCDC40Q4G0X9 1142 aa19.85■□□□□ 0.77
GNE-201ENST00000377902 SFMBT2Q5VUG0 894 aa19.85■□□□□ 0.77
GNE-201ENST00000377902 RUBCNQ92622 972 aa19.85■□□□□ 0.77
GNE-201ENST00000377902 IQCDQ96DY2 449 aa19.85■□□□□ 0.77
GNE-201ENST00000377902 FAM107BQ9H098 131 aa19.85■□□□□ 0.77
GNE-201ENST00000377902 SEC63Q9UGP8 760 aaKnown RBP19.85■□□□□ 0.77
GNE-201ENST00000377902 SSU72P8A0A1W2PR75 194 aa19.84■□□□□ 0.77
GNE-201ENST00000377902 RAD51CO43502 376 aa19.84■□□□□ 0.77
GNE-201ENST00000377902 SSBP05455 408 aaKnown RBP eCLIP19.84■□□□□ 0.77
GNE-201ENST00000377902 LRRC63Q05C16 580 aa19.84■□□□□ 0.77
GNE-201ENST00000377902 FAM133AQ8N9E0 248 aa19.84■□□□□ 0.77
GNE-201ENST00000377902 LINC00116Q8NCU8 138 aa19.84■□□□□ 0.77
GNE-201ENST00000377902 CEP95Q96GE4 821 aa19.84■□□□□ 0.77
GNE-201ENST00000377902 CENPHQ9H3R5 247 aa19.84■□□□□ 0.77
GNE-201ENST00000377902 SRP68Q9UHB9 627 aaKnown RBP19.84■□□□□ 0.77
GNE-201ENST00000377902 CAPN7Q9Y6W3 813 aa19.84■□□□□ 0.77
GNE-201ENST00000377902 CDK8P49336 464 aa19.84■□□□□ 0.77
GNE-201ENST00000377902 RAPGEF1Q13905 1077 aa19.84■□□□□ 0.77
GNE-201ENST00000377902 KIAA0753Q2KHM9 967 aa19.84■□□□□ 0.77
GNE-201ENST00000377902 RNF10Q8N5U6 811 aaKnown RBP19.84■□□□□ 0.77
GNE-201ENST00000377902 OR2W6PQ8NHA6 318 aa19.84■□□□□ 0.77
GNE-201ENST00000377902 NPHP3-ACAD11A0A0J9YXS1 232 aa19.83■□□□□ 0.77
GNE-201ENST00000377902 NAB2Q15742 525 aa19.83■□□□□ 0.77
GNE-201ENST00000377902 DDX42Q86XP3 938 aaKnown RBP eCLIP19.83■□□□□ 0.77
GNE-201ENST00000377902 COL4A3BPQ9Y5P4 624 aa19.83■□□□□ 0.77
GNE-201ENST00000377902 RBAK-RBAKDNI3L0D1 243 aa19.83■□□□□ 0.76
GNE-201ENST00000377902 HPDP32754 393 aaPredicted RBP19.83■□□□□ 0.76
GNE-201ENST00000377902 PAK2Q13177 524 aa19.83■□□□□ 0.76
GNE-201ENST00000377902 GLE1Q53GS7 698 aaKnown RBP19.83■□□□□ 0.76
GNE-201ENST00000377902 CLEC4GQ6UXB4 293 aa19.83■□□□□ 0.76
GNE-201ENST00000377902 NLRP3Q96P20 1036 aa19.83■□□□□ 0.76
GNE-201ENST00000377902 FGFR1OPO95684 399 aaKnown RBP19.82■□□□□ 0.76
GNE-201ENST00000377902 SERPING1P05155 500 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 NR1D1P20393 614 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 EIF6P56537 245 aaKnown RBP19.82■□□□□ 0.76
GNE-201ENST00000377902 COASYQ13057 564 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 UBE2SQ16763 222 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 MEI1Q5TIA1 1274 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 MYOCDQ8IZQ8 938 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 INPP4AQ96PE3 977 aaPredicted RBP19.82■□□□□ 0.76
GNE-201ENST00000377902 CEP72Q9P209 647 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 STK17AQ9UEE5 414 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 CCDC88AQ3V6T2 1871 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 FAM170AA1A519 330 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 GRID2IPA4D2P6 1211 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 NAA35Q5VZE5 725 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 KDM7AQ6ZMT4 941 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 MAATS1Q7Z4T9 603 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 CLEC10AQ8IUN9 316 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 TSG101Q99816 390 aa19.82■□□□□ 0.76
GNE-201ENST00000377902 LZTS2Q9BRK4 669 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms