RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CDK16Q00536 496 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 WEE2P0C1S8 567 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 CTSWP56202 376 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 ESRRGP62508 458 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 ATP2C1P98194 919 aaPredicted RBP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 ZBTB16Q05516 673 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 CCDC62Q6P9F0 684 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 GOPCQ9HD26 462 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 CCND1P24385 295 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 C15orf52Q6ZUT6 534 aaKnown RBP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 LARGE2Q8N3Y3 721 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 RASGRF2O14827 1237 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 COPB1P53618 953 aaKnown RBP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 DBN1Q16643 649 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 CCDC93Q567U6 631 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 IL1RAPL1Q9NZN1 696 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 SLAIN2Q9P270 581 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 I3L4J1 428 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 FAM160B2Q86V87 743 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 FAM192AQ9GZU8 254 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 ADAMTS12P58397 1594 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 HOXB8P17481 243 aaPredicted RBP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 DDX5P17844 614 aaKnown RBP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 CTNNA1P35221 906 aaKnown RBP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 TBC1D9BQ66K14 1250 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 VSIG1Q86XK7 387 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 ATP6V0A1Q93050 837 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 FAF1Q9UNN5 650 aaPredicted RBP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 MRFAP1Q9Y605 127 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 MAP2K7O14733 419 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 AGGF1Q8N302 714 aaeCLIP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 ZHX3Q9H4I2 956 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 CAVIN3Q969G5 261 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 LZTFL1Q9NQ48 299 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 ADCY7P51828 1080 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 SLC18A1P54219 525 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 SLC18A3Q16572 532 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 WDR35Q9P2L0 1181 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 DHX58Q96C10 678 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 ZDHHC9Q9Y397 364 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 ESRRBO95718 433 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 GPC5P78333 572 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 CEP85LQ5SZL2 805 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 SRGNP10124 158 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 TADA2BQ86TJ2 420 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 INTS9Q9NV88 658 aaKnown RBP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 LOC102724159A0A0B4J2E5 919 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 ACTN1P12814 892 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 PWP2Q15269 919 aaKnown RBP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 NAB2Q15742 525 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 DCAF4Q8WV16 495 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 NRBF2Q96F24 287 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 TMEM109Q9BVC6 243 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 FXR2P51116 673 aaKnown RBP eCLIP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 DDR1Q08345 913 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 SF3B3Q15393 1217 aaKnown RBP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 C2CD5Q86YS7 1000 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 AMNQ9BXJ7 453 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 STRNO43815 780 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 TTLL1O95922 423 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 ACADSP16219 412 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 CCDC125Q86Z20 511 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 ACTRT1Q8TDG2 376 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 ZNF496Q96IT1 587 aaPredicted RBP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 LRRC37BQ96QE4 947 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 PALLDQ8WX93 1383 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 EIF3HO15372 352 aaKnown RBP eCLIP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 TADA3O75528 432 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 SEL1L2Q5TEA6 688 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 DDX54Q8TDD1 881 aaKnown RBP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 TTC1Q99614 292 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 FETUBQ9UGM5 382 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 SLCO1B7G3V0H7 640 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 MARCKSP29966 332 aaPredicted RBP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 SKIV2L2P42285 1042 aaKnown RBP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 SPATS1Q496A3 300 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 TRAPPC3LQ5T215 181 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 HACE1Q8IYU2 909 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 NSMCE4AQ9NXX6 385 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 SNX12Q9UMY4 172 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 MRPS35P82673 323 aaKnown RBP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 IGDCC4Q8TDY8 1250 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 PPP4R1Q8TF05 950 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 STXBP3O00186 592 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 FGRP09769 529 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 PPARAQ07869 468 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 HAUS8Q9BT25 410 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 LIN7AO14910 233 aaPredicted RBP5.36□□□□□ -1.55
PCDH9-201ENST00000377861 MED7O43513 233 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 TFDP2Q14188 446 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 MTRQ99707 1265 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 ISCA1Q9BUE6 129 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 STX8Q9UNK0 236 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 SYNRGQ9UMZ2 1314 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 ADCY10Q96PN6 1610 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 MCPH1Q8NEM0 835 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 ABHD10Q9NUJ1 306 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 PPP1R7Q15435 360 aa5.36□□□□□ -1.55
PCDH9-201ENST00000377861 GNPTABQ3T906 1256 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms