RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 USTQ9Y2C2 406 aa11.81□□□□□ -0.52
HIF3A-205ENST00000377670 PCP11498 1178 aaKnown RBP11.8□□□□□ -0.52
HIF3A-205ENST00000377670 SPP2Q13103 211 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 RUFY4Q6ZNE9 571 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 CATSPER4Q7RTX7 472 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 ATG9AQ7Z3C6 839 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 GPBP1Q86WP2 473 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 MCUR1Q96AQ8 359 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 SLF1Q9BQI6 1058 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 STK38LQ9Y2H1 464 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 AFG3L2Q9Y4W6 797 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 GH2P01242 217 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 PSAPP07602 524 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 ACTN1P12814 892 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 ERCC5P28715 1186 aaPredicted RBP11.8□□□□□ -0.52
HIF3A-205ENST00000377670 LIG3P49916 1009 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 FCGRTP55899 365 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 TOB2Q14106 344 aaPredicted RBP11.8□□□□□ -0.52
HIF3A-205ENST00000377670 TTLL4Q14679 1199 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 CCDC110Q8TBZ0 833 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 ANKRD36BP1Q96IX9 119 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 NEDD4P46934 1319 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 VEGFAP15692 232 aaPredicted RBP11.8□□□□□ -0.52
HIF3A-205ENST00000377670 CYP4A11Q02928 519 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 PAK1Q13153 545 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 TMEM179Q6ZVK1 233 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 SMYD4Q8IYR2 804 aaPredicted RBP11.8□□□□□ -0.52
HIF3A-205ENST00000377670 VCXQ9H320 206 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 VCX3BQ9H321 246 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 KIAA1468Q9P260 1216 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 CEP170BQ9Y4F5 1589 aaPredicted RBP11.8□□□□□ -0.52
HIF3A-205ENST00000377670 SH2B2O14492 632 aaPredicted RBP11.8□□□□□ -0.52
HIF3A-205ENST00000377670 KIF3CO14782 793 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 PLEKHA8P1O95397 391 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 CYP2J2P51589 502 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 CYB5R4Q7L1T6 521 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 CACTINQ8WUQ7 758 aaKnown RBP11.8□□□□□ -0.52
HIF3A-205ENST00000377670 XPO4Q9C0E2 1151 aaKnown RBP11.8□□□□□ -0.52
HIF3A-205ENST00000377670 IL25Q9H293 177 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 CCDC38Q502W7 563 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 PDXDC2PQ6P474 469 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 PDZD4Q76G19 769 aaPredicted RBP11.8□□□□□ -0.52
HIF3A-205ENST00000377670 SP8Q8IXZ3 490 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 BANK1Q8NDB2 785 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 NELFBQ8WX92 580 aa11.8□□□□□ -0.52
HIF3A-205ENST00000377670 ACTN4O43707 911 aaKnown RBP11.79□□□□□ -0.52
HIF3A-205ENST00000377670 ADKP55263 362 aaKnown RBP11.79□□□□□ -0.52
HIF3A-205ENST00000377670 PAK2Q13177 524 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 CUL4AQ13619 759 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 NFIXQ14938 502 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 STXBP2Q15833 593 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 SNRNP48Q6IEG0 339 aaKnown RBP11.79□□□□□ -0.52
HIF3A-205ENST00000377670 PSMD2Q13200 908 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 ITPK1Q13572 414 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 BRD3Q15059 726 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 MUM1L1Q5H9M0 696 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 RNF219Q5W0B1 726 aaPredicted RBP11.79□□□□□ -0.52
HIF3A-205ENST00000377670 NUDT18Q6ZVK8 323 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 TMTC1Q8IUR5 882 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 SYMPKQ92797 1274 aaKnown RBP11.79□□□□□ -0.52
HIF3A-205ENST00000377670 PIGSQ96S52 555 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 CCDC85CA6NKD9 419 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 SCYL2Q6P3W7 929 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 RRAGCQ9HB90 399 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.79□□□□□ -0.52
HIF3A-205ENST00000377670 CPDO75976 1380 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 UBN2Q6ZU65 1347 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 CCL15-CCL14A0A0B4J2E2 113 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 CETPP11597 493 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 PPP2R5CQ13362 524 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 PDIA6Q15084 440 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 CCL15Q16663 113 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 FAM178BQ8IXR5 827 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 GIMAP8Q8ND71 665 aaPredicted RBP11.79□□□□□ -0.52
HIF3A-205ENST00000377670 GOLGA5Q8TBA6 731 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 CEP170P1Q96L14 293 aa11.79□□□□□ -0.52
HIF3A-205ENST00000377670 CPSF3Q9UKF6 684 aaKnown RBP11.79□□□□□ -0.52
HIF3A-205ENST00000377670 RIMS1Q86UR5 1692 aaKnown RBP11.79□□□□□ -0.52
HIF3A-205ENST00000377670 SYNJ2BP-COX16A0A087WUM0 186 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 DDAH1O94760 285 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 EIF2AK2P19525 551 aaKnown RBP11.78□□□□□ -0.52
HIF3A-205ENST00000377670 MTERF2Q49AM1 385 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 RNF10Q8N5U6 811 aaKnown RBP11.78□□□□□ -0.52
HIF3A-205ENST00000377670 COX16Q9P0S2 106 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 FRMD3A2A2Y4 597 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 PFDN6O15212 129 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 TSTA3Q13630 321 aaPredicted RBP11.78□□□□□ -0.52
HIF3A-205ENST00000377670 TRIM68Q6AZZ1 485 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 TAOK1Q7L7X3 1001 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 GGA3Q9NZ52 723 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 IQGAP1P46940 1657 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 CYP2B6P20813 491 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 NEK8Q86SG6 692 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 THEM5Q8N1Q8 247 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 LINC00116Q8NCU8 138 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 POMGNT1Q8WZA1 660 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 C1orf112Q9NSG2 853 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.78□□□□□ -0.52
HIF3A-205ENST00000377670 CEP104O60308 925 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 DLATP10515 647 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms