RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 PVALEFA0A1B0GWK0 134 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 KCTD19Q17RG1 926 aaPredicted RBP20.06■□□□□ 0.8
SF1-203ENST00000377387 LRRC55Q6ZSA7 311 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 CCDC84Q86UT8 332 aaPredicted RBP20.06■□□□□ 0.8
SF1-203ENST00000377387 TSG101Q99816 390 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.06■□□□□ 0.86e-6■■□□□ 11.9
SF1-203ENST00000377387 POLD4Q9HCU8 107 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 TARSL2A2RTX5 802 aaKnown RBP20.06■□□□□ 0.8
SF1-203ENST00000377387 PPP1R11O60927 126 aaPredicted RBP20.06■□□□□ 0.8
SF1-203ENST00000377387 FXR2P51116 673 aaKnown RBP eCLIP20.06■□□□□ 0.84e-18■■□□□ 13.9
SF1-203ENST00000377387 POLR2FP61218 127 aaKnown RBP20.06■□□□□ 0.8
SF1-203ENST00000377387 KCNMA1Q12791 1236 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 MYOCDQ8IZQ8 938 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 BAP1Q92560 729 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 ALS2CR12Q96Q35 445 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 RRP15Q9Y3B9 282 aaKnown RBP20.06■□□□□ 0.8
SF1-203ENST00000377387 LTBP4Q8N2S1 1624 aa20.06■□□□□ 0.8
SF1-203ENST00000377387 SCNN1DP51172 638 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 COASYQ13057 564 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 PTPROQ16827 1216 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 TTC19Q6DKK2 380 aaPredicted RBP20.05■□□□□ 0.8
SF1-203ENST00000377387 JMJD4Q9H9V9 463 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 PANK4Q9NVE7 773 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 PACSIN2Q9UNF0 486 aaPredicted RBP20.05■□□□□ 0.8
SF1-203ENST00000377387 GOLGA6BA6NDN3 693 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 USP17L15C9J2P7 530 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 USP17L13C9JLJ4 530 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 USP17L11C9JVI0 530 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 USP17L18D6R9N7 530 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 USP17L22D6RA61 530 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 USP17L17D6RBQ6 530 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 USP17L19D6RCP7 530 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 USP17L20D6RJB6 530 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 AGPSO00116 658 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 FGFR1OPO95684 399 aaKnown RBP20.05■□□□□ 0.8
SF1-203ENST00000377387 CDK17Q00537 523 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 USP17L24Q0WX57 530 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 SEMA3FQ13275 785 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 IQCEQ6IPM2 695 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 USP17L6PQ6QN14 398 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 MSL3Q8N5Y2 521 aaKnown RBP20.05■□□□□ 0.8
SF1-203ENST00000377387 PCDHA12Q9UN75 941 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 KIAA1024Q9UPX6 916 aa20.05■□□□□ 0.8
SF1-203ENST00000377387 FAM170AA1A519 330 aa20.04■□□□□ 0.8
SF1-203ENST00000377387 VGLL3A8MV65 326 aa20.04■□□□□ 0.8
SF1-203ENST00000377387 USP17L10C9JJH3 530 aa20.04■□□□□ 0.8
SF1-203ENST00000377387 PRPF6O94906 941 aaKnown RBP20.04■□□□□ 0.8
SF1-203ENST00000377387 PLCG2P16885 1265 aa20.04■□□□□ 0.8
SF1-203ENST00000377387 DNAAF5Q86Y56 855 aa20.04■□□□□ 0.8
SF1-203ENST00000377387 HAS1Q92839 578 aa20.04■□□□□ 0.8
SF1-203ENST00000377387 LSM14BQ9BX40 385 aaKnown RBP20.04■□□□□ 0.8
SF1-203ENST00000377387 DDX4Q9NQI0 724 aaKnown RBP20.04■□□□□ 0.8
SF1-203ENST00000377387 DAGLAQ9Y4D2 1042 aa20.04■□□□□ 0.8
SF1-203ENST00000377387 ZC3H4Q9UPT8 1303 aaKnown RBP20.04■□□□□ 0.8
SF1-203ENST00000377387 FTCDO95954 541 aa20.04■□□□□ 0.8
SF1-203ENST00000377387 PDXDC1Q6P996 788 aa20.04■□□□□ 0.8
SF1-203ENST00000377387 FNBP4Q8N3X1 1017 aaPredicted RBP20.04■□□□□ 0.8
SF1-203ENST00000377387 VIPAS39Q9H9C1 493 aa20.04■□□□□ 0.8
SF1-203ENST00000377387 NAV1Q8NEY1 1877 aa20.04■□□□□ 0.8
SF1-203ENST00000377387 BTAF1O14981 1849 aa20.04■□□□□ 0.8
SF1-203ENST00000377387 HYOU1Q9Y4L1 999 aa20.03■□□□□ 0.8
SF1-203ENST00000377387 FAM196BA6NMK8 535 aa20.03■□□□□ 0.8
SF1-203ENST00000377387 HNRNPH3P31942 346 aaKnown RBP20.03■□□□□ 0.8
SF1-203ENST00000377387 STAT3P40763 770 aa20.03■□□□□ 0.8
SF1-203ENST00000377387 AARSP49588 968 aaKnown RBP eCLIP20.03■□□□□ 0.8
SF1-203ENST00000377387 LRRC63Q05C16 580 aa20.03■□□□□ 0.8
SF1-203ENST00000377387 HERC4Q5GLZ8 1057 aaPredicted RBP20.03■□□□□ 0.8
SF1-203ENST00000377387 FAM26FQ5R3K3 315 aa20.03■□□□□ 0.8
SF1-203ENST00000377387 SRLQ86TD4 932 aa20.03■□□□□ 0.8
SF1-203ENST00000377387 RBM12Q9NTZ6 932 aaKnown RBP20.03■□□□□ 0.8
SF1-203ENST00000377387 COL4A3BPQ9Y5P4 624 aa20.03■□□□□ 0.8
SF1-203ENST00000377387 ESYT3A0FGR9 886 aa20.03■□□□□ 0.8
SF1-203ENST00000377387 PAFAH1B1P43034 410 aa20.03■□□□□ 0.8
SF1-203ENST00000377387 RAPGEF1Q13905 1077 aa20.03■□□□□ 0.8
SF1-203ENST00000377387 DNAJC19Q96DA6 116 aa20.03■□□□□ 0.8
SF1-203ENST00000377387 ESYT2A0FGR8 921 aa20.02■□□□□ 0.8
SF1-203ENST00000377387 POTEB3A0JP26 581 aa20.02■□□□□ 0.8
SF1-203ENST00000377387 POTECB2RU33 542 aa20.02■□□□□ 0.8
SF1-203ENST00000377387 KRT18P05783 430 aaKnown RBP20.02■□□□□ 0.8
SF1-203ENST00000377387 SNAP25P60880 206 aa20.02■□□□□ 0.8
SF1-203ENST00000377387 POTEBQ6S5H4 581 aa20.02■□□□□ 0.8
SF1-203ENST00000377387 TBC1D5Q92609 795 aa20.02■□□□□ 0.8
SF1-203ENST00000377387 TLR10Q9BXR5 811 aa20.02■□□□□ 0.8
SF1-203ENST00000377387 EHD4Q9H223 541 aa20.02■□□□□ 0.8
SF1-203ENST00000377387 FAM184BQ9ULE4 1060 aa20.02■□□□□ 0.8
SF1-203ENST00000377387 MAST2Q6P0Q8 1798 aa20.02■□□□□ 0.8
SF1-203ENST00000377387 ZSCAN5CA6NGD5 496 aaPredicted RBP20.02■□□□□ 0.79
SF1-203ENST00000377387 ATP2B4P23634 1241 aa20.02■□□□□ 0.79
SF1-203ENST00000377387 FKBP3Q00688 224 aaKnown RBP20.02■□□□□ 0.79
SF1-203ENST00000377387 PDIA5Q14554 519 aa20.02■□□□□ 0.79
SF1-203ENST00000377387 FAM83BQ5T0W9 1011 aa20.02■□□□□ 0.79
SF1-203ENST00000377387 TBC1D16Q8TBP0 767 aa20.02■□□□□ 0.79
SF1-203ENST00000377387 PSTPIP2Q9H939 334 aa20.02■□□□□ 0.79
SF1-203ENST00000377387 DDX60LQ5H9U9 1706 aaKnown RBP20.01■□□□□ 0.79
SF1-203ENST00000377387 GOLGA6CA6NDK9 693 aa20.01■□□□□ 0.79
SF1-203ENST00000377387 TLR2O60603 784 aa20.01■□□□□ 0.79
SF1-203ENST00000377387 IVLP07476 585 aa20.01■□□□□ 0.79
SF1-203ENST00000377387 GOLGA6DP0CG33 693 aa20.01■□□□□ 0.79
SF1-203ENST00000377387 PPARDQ03181 441 aa20.01■□□□□ 0.79
SF1-203ENST00000377387 SHROOM1Q2M3G4 852 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms