RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 ZNF18P17022 549 aa17.07■□□□□ 0.32
FXN-201ENST00000377270 RASGRP2Q7LDG7 609 aa17.07■□□□□ 0.32
FXN-201ENST00000377270 SAPCD2Q86UD0 394 aa17.07■□□□□ 0.32
FXN-201ENST00000377270 CNBD1Q8NA66 436 aa17.07■□□□□ 0.32
FXN-201ENST00000377270 WDR66Q8TBY9 1149 aa17.07■□□□□ 0.32
FXN-201ENST00000377270 COG1Q8WTW3 980 aa17.07■□□□□ 0.32
FXN-201ENST00000377270 ZNF570Q96NI8 536 aa17.07■□□□□ 0.32
FXN-201ENST00000377270 UBE2OQ9C0C9 1292 aaKnown RBP17.07■□□□□ 0.32
FXN-201ENST00000377270 NACA2Q9H009 215 aa17.07■□□□□ 0.32
FXN-201ENST00000377270 LEMD3Q9Y2U8 911 aa17.07■□□□□ 0.32
FXN-201ENST00000377270 ENOX2Q16206 610 aaKnown RBP17.07■□□□□ 0.32
FXN-201ENST00000377270 GPR101Q96P66 508 aaPredicted RBP17.07■□□□□ 0.32
FXN-201ENST00000377270 BAZ2BQ9UIF8 2168 aaKnown RBP17.06■□□□□ 0.32
FXN-201ENST00000377270 LIN7AO14910 233 aaPredicted RBP17.06■□□□□ 0.32
FXN-201ENST00000377270 CREB3O43889 395 aa17.06■□□□□ 0.32
FXN-201ENST00000377270 RPL13P26373 211 aaKnown RBP17.06■□□□□ 0.32
FXN-201ENST00000377270 TFAP4Q01664 338 aa17.06■□□□□ 0.32
FXN-201ENST00000377270 IFFO1Q0D2I5 559 aa17.06■□□□□ 0.32
FXN-201ENST00000377270 BLMHQ13867 455 aa17.06■□□□□ 0.32
FXN-201ENST00000377270 ZNF174Q15697 407 aa17.06■□□□□ 0.32
FXN-201ENST00000377270 DHRS1Q96LJ7 313 aa17.06■□□□□ 0.32
FXN-201ENST00000377270 UTP6Q9NYH9 597 aaKnown RBP17.06■□□□□ 0.32
FXN-201ENST00000377270 PDLIM1O00151 329 aa17.06■□□□□ 0.32
FXN-201ENST00000377270 WNT7AO00755 349 aa17.06■□□□□ 0.32
FXN-201ENST00000377270 E2F6O75461 281 aa17.06■□□□□ 0.32
FXN-201ENST00000377270 IFT88Q13099 833 aa17.06■□□□□ 0.32
FXN-201ENST00000377270 DIXDC1Q155Q3 683 aa17.06■□□□□ 0.32
FXN-201ENST00000377270 NUGGCQ68CJ6 796 aa17.06■□□□□ 0.32
FXN-201ENST00000377270 SH3RF3Q8TEJ3 882 aaPredicted RBP17.06■□□□□ 0.32
FXN-201ENST00000377270 EPSTI1Q96J88 318 aa17.06■□□□□ 0.32
FXN-201ENST00000377270 PIDD1Q9HB75 910 aa17.06■□□□□ 0.32
FXN-201ENST00000377270 NFE2L3Q9Y4A8 694 aa17.06■□□□□ 0.32
FXN-201ENST00000377270 ACTN4O43707 911 aaKnown RBP17.05■□□□□ 0.32
FXN-201ENST00000377270 CA8P35219 290 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 USP14P54578 494 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 NPY5RQ15761 445 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 C12orf60Q5U649 245 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 KANK3Q6NY19 840 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 OGFOD1Q8N543 542 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 SMCR8Q8TEV9 937 aaPredicted RBP17.05■□□□□ 0.32
FXN-201ENST00000377270 DYNLL2Q96FJ2 89 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 PAGR1Q9BTK6 254 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 TTF2Q9UNY4 1162 aaKnown RBP17.05■□□□□ 0.32
FXN-201ENST00000377270 F8VZ95 297 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 MGRN1O60291 552 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 SCG2P13521 617 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 SARSP49591 514 aaKnown RBP17.05■□□□□ 0.32
FXN-201ENST00000377270 NLRP5P59047 1200 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 DRP2Q13474 957 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 NR1I3Q14994 352 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 GRIK5Q16478 980 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 ZNF827Q17R98 1081 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 NT5DC1Q5TFE4 455 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 DTNBP1Q96EV8 351 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 NOD2Q9HC29 1040 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 ZFATQ9P243 1243 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 NHSQ6T4R5 1651 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 XDHP47989 1333 aa17.05■□□□□ 0.32
FXN-201ENST00000377270 TNRC6CQ9HCJ0 1690 aaKnown RBP17.04■□□□□ 0.32
FXN-201ENST00000377270 VEGFAP15692 232 aaPredicted RBP17.04■□□□□ 0.32
FXN-201ENST00000377270 VCAM1P19320 739 aa17.04■□□□□ 0.32
FXN-201ENST00000377270 TSNAXIP1Q2TAA8 658 aa17.04■□□□□ 0.32
FXN-201ENST00000377270 ZNF804AQ7Z570 1209 aa17.04■□□□□ 0.32
FXN-201ENST00000377270 TNFRSF25Q93038 417 aa17.04■□□□□ 0.32
FXN-201ENST00000377270 SLC35B4Q969S0 331 aa17.04■□□□□ 0.32
FXN-201ENST00000377270 ACTR5Q9H9F9 607 aaPredicted RBP17.04■□□□□ 0.32
FXN-201ENST00000377270 PCMTD2Q9NV79 361 aa17.04■□□□□ 0.32
FXN-201ENST00000377270 CCDC88AQ3V6T2 1871 aa17.04■□□□□ 0.32
FXN-201ENST00000377270 ANP32DO95626 131 aa17.04■□□□□ 0.32
FXN-201ENST00000377270 RHBDL3P58872 404 aa17.04■□□□□ 0.32
FXN-201ENST00000377270 TTC38Q5R3I4 469 aa17.04■□□□□ 0.32
FXN-201ENST00000377270 MLKLQ8NB16 471 aa17.04■□□□□ 0.32
FXN-201ENST00000377270 SH3GL2Q99962 352 aa17.04■□□□□ 0.32
FXN-201ENST00000377270 MKNK2Q9HBH9 465 aa17.04■□□□□ 0.32
FXN-201ENST00000377270 DLEC1Q9Y238 1755 aa17.04■□□□□ 0.32
FXN-201ENST00000377270 A0A087X0B3 334 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 AGPSO00116 658 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 ATP6V1G2O95670 118 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 BAG3O95817 575 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 BMP15O95972 392 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 KIF5BP33176 963 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 GSTO1P78417 241 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 AMPD2Q01433 879 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 PDCLQ13371 301 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 MORC3Q14149 939 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 NAA35Q5VZE5 725 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 NCAPH2Q6IBW4 605 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 PPFIBP1Q86W92 1011 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 ENOX1Q8TC92 643 aaKnown RBP17.03■□□□□ 0.32
FXN-201ENST00000377270 RPGRQ92834 1020 aaKnown RBP17.03■□□□□ 0.32
FXN-201ENST00000377270 FERMT2Q96AC1 680 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 GJD4Q96KN9 370 aaPredicted RBP17.03■□□□□ 0.32
FXN-201ENST00000377270 IL17RBQ9NRM6 502 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 LRRC4BQ9NT99 713 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 PTGDRQ13258 359 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 PFKFB3Q16875 520 aaPredicted RBP17.03■□□□□ 0.32
FXN-201ENST00000377270 PRR5LQ6MZQ0 368 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 PIK3AP1Q6ZUJ8 805 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 TGFBRAP1Q8WUH2 860 aa17.03■□□□□ 0.32
FXN-201ENST00000377270 SYMPKQ92797 1274 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms