RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 GGPS1O95749 300 aa25.33■■□□□ 1.65
SRM-201ENST00000376957 TIMP1P01033 207 aa25.33■■□□□ 1.65
SRM-201ENST00000376957 GNA11P29992 359 aa25.33■■□□□ 1.65
SRM-201ENST00000376957 ICAM3P32942 547 aa25.33■■□□□ 1.65
SRM-201ENST00000376957 FAM47CQ5HY64 1035 aa25.33■■□□□ 1.65
SRM-201ENST00000376957 CELF3Q5SZQ8 465 aaKnown RBP25.33■■□□□ 1.65
SRM-201ENST00000376957 TMEM199Q8N511 208 aa25.33■■□□□ 1.65
SRM-201ENST00000376957 SPATA33Q96N06 139 aa25.33■■□□□ 1.65
SRM-201ENST00000376957 C6orf50Q9HD87 102 aa25.33■■□□□ 1.65
SRM-201ENST00000376957 STXBP3O00186 592 aa25.32■■□□□ 1.64
SRM-201ENST00000376957 MAFGO15525 162 aa25.32■■□□□ 1.64
SRM-201ENST00000376957 RGS20O76081 388 aa25.32■■□□□ 1.64
SRM-201ENST00000376957 CCT2P78371 535 aaKnown RBP25.32■■□□□ 1.64
SRM-201ENST00000376957 MRPS9P82933 396 aaKnown RBP25.32■■□□□ 1.64
SRM-201ENST00000376957 FPGSQ05932 587 aa25.32■■□□□ 1.64
SRM-201ENST00000376957 AP3B2Q13367 1082 aa25.32■■□□□ 1.64
SRM-201ENST00000376957 TOB2Q14106 344 aaPredicted RBP25.32■■□□□ 1.64
SRM-201ENST00000376957 UBE2SQ16763 222 aa25.32■■□□□ 1.64
SRM-201ENST00000376957 MYSM1Q5VVJ2 828 aa25.32■■□□□ 1.64
SRM-201ENST00000376957 NOD1Q9Y239 953 aa25.32■■□□□ 1.64
SRM-201ENST00000376957 SPATA31C2B4DYI2 1134 aa25.31■■□□□ 1.64
SRM-201ENST00000376957 CD4P01730 458 aa25.31■■□□□ 1.64
SRM-201ENST00000376957 IFNAR1P17181 557 aa25.31■■□□□ 1.64
SRM-201ENST00000376957 CHMP4BP1P59074 171 aa25.31■■□□□ 1.64
SRM-201ENST00000376957 NBPF20Q3BBV1 942 aa25.31■■□□□ 1.64
SRM-201ENST00000376957 CCDC148Q8NFR7 591 aa25.31■■□□□ 1.64
SRM-201ENST00000376957 BICD2Q8TD16 824 aa25.31■■□□□ 1.64
SRM-201ENST00000376957 GPRASP2Q96D09 838 aa25.31■■□□□ 1.64
SRM-201ENST00000376957 SENP7Q9BQF6 1050 aa25.31■■□□□ 1.64
SRM-201ENST00000376957 ALDH8A1Q9H2A2 487 aaPredicted RBP25.31■■□□□ 1.64
SRM-201ENST00000376957 TBX21Q9UL17 535 aa25.31■■□□□ 1.64
SRM-201ENST00000376957 MYH7BA7E2Y1 1941 aa25.3■■□□□ 1.64
SRM-201ENST00000376957 CDKL5O76039 1030 aa25.3■■□□□ 1.64
SRM-201ENST00000376957 UBA1P22314 1058 aaKnown RBP25.3■■□□□ 1.64
SRM-201ENST00000376957 FXR1P51114 621 aaKnown RBP eCLIP25.3■■□□□ 1.64
SRM-201ENST00000376957 SSRP1Q08945 709 aaKnown RBP25.3■■□□□ 1.64
SRM-201ENST00000376957 MFSD5Q6N075 450 aa25.3■■□□□ 1.64
SRM-201ENST00000376957 ZFP91Q96JP5 570 aaPredicted RBP25.3■■□□□ 1.64
SRM-201ENST00000376957 SLC26A6Q9BXS9 759 aa25.3■■□□□ 1.64
SRM-201ENST00000376957 HIPK3Q9H422 1215 aa25.3■■□□□ 1.64
SRM-201ENST00000376957 GRIN2DO15399 1336 aa25.3■■□□□ 1.64
SRM-201ENST00000376957 LTBP2Q14767 1821 aa25.29■■□□□ 1.64
SRM-201ENST00000376957 B4GALT4O60513 344 aa25.29■■□□□ 1.64
SRM-201ENST00000376957 PPIGQ13427 754 aaKnown RBP eCLIP25.29■■□□□ 1.642e-6■□□□□ 8.9
SRM-201ENST00000376957 LRIT3Q3SXY7 679 aa25.29■■□□□ 1.64
SRM-201ENST00000376957 ESYT2A0FGR8 921 aa25.28■■□□□ 1.64
SRM-201ENST00000376957 MTMR1Q13613 665 aa25.28■■□□□ 1.64
SRM-201ENST00000376957 METTL7BQ6UX53 244 aa25.28■■□□□ 1.64
SRM-201ENST00000376957 C7orf31Q8N865 590 aa25.28■■□□□ 1.64
SRM-201ENST00000376957 PHKBQ93100 1093 aa25.28■■□□□ 1.64
SRM-201ENST00000376957 SLKQ9H2G2 1235 aaPredicted RBP25.28■■□□□ 1.64
SRM-201ENST00000376957 SP2Q02086 613 aa25.27■■□□□ 1.64
SRM-201ENST00000376957 PPP1R12CQ9BZL4 782 aa25.27■■□□□ 1.64
SRM-201ENST00000376957 ZMYND12Q9H0C1 365 aa25.27■■□□□ 1.64
SRM-201ENST00000376957 TRPV6Q9H1D0 765 aa25.27■■□□□ 1.64
SRM-201ENST00000376957 NCOA5Q9HCD5 579 aaKnown RBP25.27■■□□□ 1.64
SRM-201ENST00000376957 SH3GLB2Q9NR46 395 aa25.27■■□□□ 1.64
SRM-201ENST00000376957 ZNF76P36508 570 aa25.26■■□□□ 1.63
SRM-201ENST00000376957 STK3Q13188 491 aa25.26■■□□□ 1.63
SRM-201ENST00000376957 NTRK3Q16288 839 aa25.26■■□□□ 1.63
SRM-201ENST00000376957 HSDL1Q3SXM5 330 aa25.26■■□□□ 1.63
SRM-201ENST00000376957 TYW1BQ6NUM6 668 aa25.26■■□□□ 1.63
SRM-201ENST00000376957 CYFIP1Q7L576 1253 aa25.26■■□□□ 1.63
SRM-201ENST00000376957 REXO1Q8N1G1 1221 aaKnown RBP25.26■■□□□ 1.63
SRM-201ENST00000376957 CCDC155Q8N6L0 562 aa25.26■■□□□ 1.63
SRM-201ENST00000376957 ANO3Q9BYT9 981 aa25.26■■□□□ 1.63
SRM-201ENST00000376957 DEXIO95424 95 aa25.25■■□□□ 1.63
SRM-201ENST00000376957 SESTD1Q86VW0 696 aa25.25■■□□□ 1.63
SRM-201ENST00000376957 FAM177A1Q8N128 213 aaPredicted RBP25.25■■□□□ 1.63
SRM-201ENST00000376957 RETREG2Q8NC44 543 aa25.25■■□□□ 1.63
SRM-201ENST00000376957 JADE2Q9NQC1 790 aa25.25■■□□□ 1.63
SRM-201ENST00000376957 TRMT13Q9NUP7 481 aaKnown RBP25.25■■□□□ 1.63
SRM-201ENST00000376957 SCN10AQ9Y5Y9 1956 aa25.25■■□□□ 1.63
SRM-201ENST00000376957 TRIOBPQ9H2D6 2365 aa25.25■■□□□ 1.63
SRM-201ENST00000376957 SORBS3O60504 671 aa25.24■■□□□ 1.63
SRM-201ENST00000376957 F2P00734 622 aa25.24■■□□□ 1.63
SRM-201ENST00000376957 HOXD8P13378 290 aaPredicted RBP25.24■■□□□ 1.63
SRM-201ENST00000376957 XBP1P17861 261 aa25.24■■□□□ 1.63
SRM-201ENST00000376957 ITGB8P26012 769 aa25.24■■□□□ 1.63
SRM-201ENST00000376957 PSEN2P49810 448 aa25.24■■□□□ 1.63
SRM-201ENST00000376957 BFSP2Q13515 415 aa25.24■■□□□ 1.63
SRM-201ENST00000376957 MFSD10Q14728 455 aa25.24■■□□□ 1.63
SRM-201ENST00000376957 ALG1Q9BT22 464 aa25.24■■□□□ 1.63
SRM-201ENST00000376957 ZNF215Q9UL58 517 aaPredicted RBP25.24■■□□□ 1.63
SRM-201ENST00000376957 UBIAD1Q9Y5Z9 338 aa25.24■■□□□ 1.63
SRM-201ENST00000376957 ITGB5P18084 799 aa25.23■■□□□ 1.63
SRM-201ENST00000376957 CLK2P49760 499 aaKnown RBP25.23■■□□□ 1.63
SRM-201ENST00000376957 NLRP5P59047 1200 aa25.23■■□□□ 1.63
SRM-201ENST00000376957 PKN1Q16512 942 aa25.23■■□□□ 1.63
SRM-201ENST00000376957 PTGISQ16647 500 aa25.23■■□□□ 1.63
SRM-201ENST00000376957 KIAA0753Q2KHM9 967 aa25.23■■□□□ 1.63
SRM-201ENST00000376957 RPUSD2Q8IZ73 545 aaKnown RBP25.23■■□□□ 1.63
SRM-201ENST00000376957 MXRA8Q9BRK3 442 aa25.23■■□□□ 1.63
SRM-201ENST00000376957 LARP6Q9BRS8 491 aaKnown RBP25.23■■□□□ 1.63
SRM-201ENST00000376957 MTIF3Q9H2K0 278 aaKnown RBP25.23■■□□□ 1.63
SRM-201ENST00000376957 H3BRB1 525 aa25.22■■□□□ 1.63
SRM-201ENST00000376957 ZNF286BP0CG31 522 aa25.22■■□□□ 1.63
SRM-201ENST00000376957 CYP2C18P33260 490 aa25.22■■□□□ 1.63
SRM-201ENST00000376957 SREBF1P36956 1147 aa25.22■■□□□ 1.63
SRM-201ENST00000376957 SHHQ15465 462 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms