RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 VWCEQ96DN2 955 aa17.05■□□□□ 0.32
HDAC6-204ENST00000376643 RRP36Q96EU6 259 aaKnown RBP17.05■□□□□ 0.32
HDAC6-204ENST00000376643 PIGSQ96S52 555 aa17.05■□□□□ 0.32
HDAC6-204ENST00000376643 ALG1Q9BT22 464 aa17.05■□□□□ 0.32
HDAC6-204ENST00000376643 IL25Q9H293 177 aa17.05■□□□□ 0.32
HDAC6-204ENST00000376643 HDAC6Q9UBN7 1215 aa17.05■□□□□ 0.32
HDAC6-204ENST00000376643 TLL1O43897 1013 aa17.04■□□□□ 0.32
HDAC6-204ENST00000376643 PPP1R11O60927 126 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-204ENST00000376643 CXCL10P02778 98 aa17.04■□□□□ 0.32
HDAC6-204ENST00000376643 CALM1P0DP23 149 aa17.04■□□□□ 0.32
HDAC6-204ENST00000376643 CALM2P0DP24 149 aa17.04■□□□□ 0.32
HDAC6-204ENST00000376643 CALM3P0DP25 149 aa17.04■□□□□ 0.32
HDAC6-204ENST00000376643 GNAT1P11488 350 aa17.04■□□□□ 0.32
HDAC6-204ENST00000376643 CKBP12277 381 aa17.04■□□□□ 0.32
HDAC6-204ENST00000376643 POU3F3P20264 500 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-204ENST00000376643 UBA1P22314 1058 aaKnown RBP17.04■□□□□ 0.32
HDAC6-204ENST00000376643 HOXA13P31271 388 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-204ENST00000376643 PTH1RQ03431 593 aa17.04■□□□□ 0.32
HDAC6-204ENST00000376643 ADGRE1Q14246 886 aa17.04■□□□□ 0.32
HDAC6-204ENST00000376643 FCHSD1Q86WN1 690 aa17.04■□□□□ 0.32
HDAC6-204ENST00000376643 GIMAP8Q8ND71 665 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-204ENST00000376643 MAP4K1Q92918 833 aa17.04■□□□□ 0.32
HDAC6-204ENST00000376643 TMEM87BQ96K49 555 aa17.04■□□□□ 0.32
HDAC6-204ENST00000376643 ASB2Q96Q27 587 aa17.04■□□□□ 0.32
HDAC6-204ENST00000376643 ZBED2Q9BTP6 218 aa17.04■□□□□ 0.32
HDAC6-204ENST00000376643 SPZ1Q9BXG8 430 aa17.04■□□□□ 0.32
HDAC6-204ENST00000376643 FIBPO43427 364 aa17.03■□□□□ 0.32
HDAC6-204ENST00000376643 CAND2O75155 1236 aa17.03■□□□□ 0.32
HDAC6-204ENST00000376643 ZNF286BP0CG31 522 aa17.03■□□□□ 0.32
HDAC6-204ENST00000376643 MCM5P33992 734 aa17.03■□□□□ 0.32
HDAC6-204ENST00000376643 IKBKEQ14164 716 aa17.03■□□□□ 0.32
HDAC6-204ENST00000376643 SMARCC2Q8TAQ2 1214 aa17.03■□□□□ 0.32
HDAC6-204ENST00000376643 CDHR1Q96JP9 859 aa17.03■□□□□ 0.32
HDAC6-204ENST00000376643 USP26Q9BXU7 913 aa17.03■□□□□ 0.32
HDAC6-204ENST00000376643 ZNF215Q9UL58 517 aaPredicted RBP17.03■□□□□ 0.32
HDAC6-204ENST00000376643 MYO9BQ13459 2157 aa17.02■□□□□ 0.32
HDAC6-204ENST00000376643 FRMPD4Q14CM0 1322 aa17.02■□□□□ 0.32
HDAC6-204ENST00000376643 CCDC69A6NI79 296 aa17.02■□□□□ 0.32
HDAC6-204ENST00000376643 TNFRSF10AO00220 468 aa17.02■□□□□ 0.32
HDAC6-204ENST00000376643 ICAM3P32942 547 aa17.02■□□□□ 0.32
HDAC6-204ENST00000376643 WDR5P61964 334 aaKnown RBP17.02■□□□□ 0.32
HDAC6-204ENST00000376643 METTL7BQ6UX53 244 aa17.02■□□□□ 0.32
HDAC6-204ENST00000376643 NFXL1Q6ZNB6 911 aa17.02■□□□□ 0.32
HDAC6-204ENST00000376643 NLRX1Q86UT6 975 aa17.02■□□□□ 0.32
HDAC6-204ENST00000376643 MB21D2Q8IYB1 491 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-204ENST00000376643 ZNF654Q8IZM8 581 aa17.02■□□□□ 0.32
HDAC6-204ENST00000376643 RBM8AQ9Y5S9 174 aaKnown RBP17.02■□□□□ 0.32
HDAC6-204ENST00000376643 C17orf102A2RUQ5 167 aa17.01■□□□□ 0.31
HDAC6-204ENST00000376643 H3BRB1 525 aa17.01■□□□□ 0.31
HDAC6-204ENST00000376643 PIK3CDO00329 1044 aa17.01■□□□□ 0.31
HDAC6-204ENST00000376643 CYTH3O43739 400 aa17.01■□□□□ 0.31
HDAC6-204ENST00000376643 RGS20O76081 388 aa17.01■□□□□ 0.31
HDAC6-204ENST00000376643 MYOGP15173 224 aa17.01■□□□□ 0.31
HDAC6-204ENST00000376643 SKIV2LQ15477 1246 aaKnown RBP17.01■□□□□ 0.31
HDAC6-204ENST00000376643 CCDC85BQ15834 202 aaPredicted RBP17.01■□□□□ 0.31
HDAC6-204ENST00000376643 HSDL1Q3SXM5 330 aa17.01■□□□□ 0.31
HDAC6-204ENST00000376643 TEX2Q8IWB9 1127 aa17.01■□□□□ 0.31
HDAC6-204ENST00000376643 MICALL1Q8N3F8 863 aa17.01■□□□□ 0.31
HDAC6-204ENST00000376643 IGDCC4Q8TDY8 1250 aa17.01■□□□□ 0.31
HDAC6-204ENST00000376643 DHX38Q92620 1227 aaKnown RBP17.01■□□□□ 0.31
HDAC6-204ENST00000376643 INPP4AQ96PE3 977 aaPredicted RBP17.01■□□□□ 0.31
HDAC6-204ENST00000376643 CTAGE1Q96RT6 745 aa17.01■□□□□ 0.31
HDAC6-204ENST00000376643 TUT1Q9H6E5 874 aaKnown RBP17.01■□□□□ 0.31
HDAC6-204ENST00000376643 LMCD1Q9NZU5 365 aa17.01■□□□□ 0.31
HDAC6-204ENST00000376643 COG5Q9UP83 839 aa17.01■□□□□ 0.31
HDAC6-204ENST00000376643 LIFRP42702 1097 aa17■□□□□ 0.31
HDAC6-204ENST00000376643 TAP1Q03518 808 aa17■□□□□ 0.31
HDAC6-204ENST00000376643 RNF20Q5VTR2 975 aa17■□□□□ 0.31
HDAC6-204ENST00000376643 PCNX4Q63HM2 1172 aa17■□□□□ 0.31
HDAC6-204ENST00000376643 SERINC5Q86VE9 423 aa17■□□□□ 0.31
HDAC6-204ENST00000376643 PPP1R13LQ8WUF5 828 aa17■□□□□ 0.31
HDAC6-204ENST00000376643 ARNTL2Q8WYA1 636 aa17■□□□□ 0.31
HDAC6-204ENST00000376643 ATP6V0A1Q93050 837 aa17■□□□□ 0.31
HDAC6-204ENST00000376643 RAD9AQ99638 391 aa17■□□□□ 0.31
HDAC6-204ENST00000376643 SENP7Q9BQF6 1050 aa17■□□□□ 0.31
HDAC6-204ENST00000376643 EHMT1Q9H9B1 1298 aa17■□□□□ 0.31
HDAC6-204ENST00000376643 PRDM6Q9NQX0 595 aa17■□□□□ 0.31
HDAC6-204ENST00000376643 GBF1Q92538 1859 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 RSPH10B2B2RC85 870 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 SPATA31C2B4DYI2 1134 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 PRC1O43663 620 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 NBNO60934 754 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 LGR5O75473 907 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 AMHP03971 560 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 LGALS2P05162 132 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 RSPH10BP0C881 870 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 SYNE3Q6ZMZ3 975 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 IL31RAQ8NI17 732 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 C16orf70Q9BSU1 422 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 LY9Q9HBG7 655 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 MTCH2Q9Y6C9 303 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 SCN5AQ14524 2016 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 EYSQ5T1H1 3165 aa16.99■□□□□ 0.31
HDAC6-204ENST00000376643 GJB5O95377 273 aa16.98■□□□□ 0.31
HDAC6-204ENST00000376643 RPLP2P05387 115 aaKnown RBP16.98■□□□□ 0.31
HDAC6-204ENST00000376643 THPOP40225 353 aa16.98■□□□□ 0.31
HDAC6-204ENST00000376643 ANTXR2P58335 489 aa16.98■□□□□ 0.31
HDAC6-204ENST00000376643 TRIM71Q2Q1W2 868 aaKnown RBP16.98■□□□□ 0.31
HDAC6-204ENST00000376643 ZNF618Q5T7W0 954 aa16.98■□□□□ 0.31
HDAC6-204ENST00000376643 ADAMTS19Q8TE59 1207 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms