RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 ARHGAP27Q6ZUM4 889 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 GLIS3Q8NEA6 775 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 PDE11AQ9HCR9 933 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 RWDD2AQ9UIY3 292 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 FRMD4BQ9Y2L6 1034 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 ALS2Q96Q42 1657 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 MYMKA6NI61 221 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 C2orf54Q08AI8 447 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 DPYDQ12882 1025 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 MB21D1Q8N884 522 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 TRIM9Q9C026 710 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 NHEJ1Q9H9Q4 299 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-203ENST00000376619 RAVER2Q9HCJ3 691 aaKnown RBP12.28□□□□□ -0.44
HDAC6-203ENST00000376619 HPSEQ9Y251 543 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 RABGAP1Q9Y3P9 1069 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 GCOM1H8Y6P7 765 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-203ENST00000376619 KCNK3O14649 394 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 POLR2MP0CAP2 368 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 STAT2P52630 851 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 ARHGAP4P98171 946 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 SMC1AQ14683 1233 aaKnown RBP12.28□□□□□ -0.44
HDAC6-203ENST00000376619 KCTD16Q68DU8 428 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 ABHD10Q9NUJ1 306 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 TRPM3Q9HCF6 1732 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-203ENST00000376619 CCDC66A2RUB6 948 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 GFPT1Q06210 699 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-203ENST00000376619 ASIC2Q16515 512 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 XKR9Q5GH70 373 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 MIER3Q7Z3K6 550 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 ZNF577Q9BSK1 485 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 RTFDC1Q9BY42 306 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-203ENST00000376619 EHMT1Q9H9B1 1298 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 JMJD4Q9H9V9 463 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 ADGRG1Q9Y653 693 aa12.28□□□□□ -0.44
HDAC6-203ENST00000376619 SSTR3P32745 418 aaPredicted RBP12.27□□□□□ -0.44
HDAC6-203ENST00000376619 SYDE2Q5VT97 1194 aa12.27□□□□□ -0.44
HDAC6-203ENST00000376619 PAXIP1Q6ZW49 1069 aaPredicted RBP12.27□□□□□ -0.44
HDAC6-203ENST00000376619 SFR1Q86XK3 245 aa12.27□□□□□ -0.44
HDAC6-203ENST00000376619 PPM1KQ8N3J5 372 aa12.27□□□□□ -0.44
HDAC6-203ENST00000376619 GBP3Q9H0R5 595 aa12.27□□□□□ -0.44
HDAC6-203ENST00000376619 PICK1Q9NRD5 415 aa12.27□□□□□ -0.44
HDAC6-203ENST00000376619 RGPD5Q99666 1765 aa12.27□□□□□ -0.45
HDAC6-203ENST00000376619 ESYT3A0FGR9 886 aa12.27□□□□□ -0.45
HDAC6-203ENST00000376619 NDUFB10O96000 172 aa12.27□□□□□ -0.45
HDAC6-203ENST00000376619 K7ENM7 598 aa12.27□□□□□ -0.45
HDAC6-203ENST00000376619 GYPCP04921 128 aa12.27□□□□□ -0.45
HDAC6-203ENST00000376619 SPP2Q13103 211 aa12.27□□□□□ -0.45
HDAC6-203ENST00000376619 ZNF579Q8NAF0 562 aaKnown RBP12.27□□□□□ -0.45
HDAC6-203ENST00000376619 EHD2Q9NZN4 543 aa12.27□□□□□ -0.45
HDAC6-203ENST00000376619 GFPT2O94808 682 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 ACTN1P12814 892 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 RPL13P26373 211 aaKnown RBP12.26□□□□□ -0.45
HDAC6-203ENST00000376619 MAP9Q49MG5 647 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 MTFR1LQ9H019 292 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 ATP6V0A2Q9Y487 856 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 ABCB11O95342 1321 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 PPP1R3GB7ZBB8 358 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 ABL1P00519 1130 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 NEFHP12036 1026 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 ARL6IP4Q66PJ3 421 aaKnown RBP12.26□□□□□ -0.45
HDAC6-203ENST00000376619 C8orf74Q6P047 294 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 RBM43Q6ZSC3 357 aaKnown RBP12.26□□□□□ -0.45
HDAC6-203ENST00000376619 TTLL6Q8N841 843 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 EHBP1Q8NDI1 1231 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 HOOK2Q96ED9 719 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 CCDC17Q96LX7 622 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 ADD3Q9UEY8 706 aaKnown RBP12.26□□□□□ -0.45
HDAC6-203ENST00000376619 USTQ9Y2C2 406 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 LRRC53A6NM62 1247 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 FKBP3Q00688 224 aaKnown RBP12.26□□□□□ -0.45
HDAC6-203ENST00000376619 ZNF543Q08ER8 600 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 CCDC50Q8IVM0 306 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 CHURC1Q8WUH1 139 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 NT5C3AQ9H0P0 336 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 GPR75-ASB3A0A0A6YYF3 556 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 ZBTB39O15060 712 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 TRIM49P0CI25 452 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 TRIM49CP0CI26 452 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 TNFAIP3P21580 790 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 ATP1A2P50993 1020 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 PLCB3Q01970 1234 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 EAPPQ56P03 285 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-203ENST00000376619 RNF187Q5TA31 235 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-203ENST00000376619 RC3H1Q5TC82 1133 aaKnown RBP12.26□□□□□ -0.45
HDAC6-203ENST00000376619 SAMD7Q7Z3H4 446 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 DPH5Q9H2P9 285 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 DDX41Q9UJV9 622 aaKnown RBP12.26□□□□□ -0.45
HDAC6-203ENST00000376619 CDC23Q9UJX2 597 aa12.26□□□□□ -0.45
HDAC6-203ENST00000376619 PHRF1Q9P1Y6 1649 aaKnown RBP12.25□□□□□ -0.45
HDAC6-203ENST00000376619 NMT1P30419 496 aaKnown RBP12.25□□□□□ -0.45
HDAC6-203ENST00000376619 STXBP4Q6ZWJ1 553 aa12.25□□□□□ -0.45
HDAC6-203ENST00000376619 PODNQ7Z5L7 613 aa12.25□□□□□ -0.45
HDAC6-203ENST00000376619 SP8Q8IXZ3 490 aa12.25□□□□□ -0.45
HDAC6-203ENST00000376619 CERS5Q8N5B7 392 aa12.25□□□□□ -0.45
HDAC6-203ENST00000376619 CTTNBP2NLQ9P2B4 639 aa12.25□□□□□ -0.45
HDAC6-203ENST00000376619 EXOC3L4Q17RC7 722 aa12.25□□□□□ -0.45
HDAC6-203ENST00000376619 ZC2HC1CQ53FD0 456 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-203ENST00000376619 ARHGEF16Q5VV41 709 aa12.25□□□□□ -0.45
HDAC6-203ENST00000376619 BBXQ8WY36 941 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-203ENST00000376619 NOX5Q96PH1 765 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms