RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 XKR9Q5GH70 373 aa23.01■■□□□ 1.27
TGFBR1-202ENST00000374994 UNC13DQ70J99 1090 aa23.01■■□□□ 1.27
TGFBR1-202ENST00000374994 RHOT2Q8IXI1 618 aa23.01■■□□□ 1.27
TGFBR1-202ENST00000374994 BANK1Q8NDB2 785 aa23.01■■□□□ 1.27
TGFBR1-202ENST00000374994 SGO2Q562F6 1265 aa23.01■■□□□ 1.27
TGFBR1-202ENST00000374994 HSP90AA5PQ58FG0 334 aa23.01■■□□□ 1.27
TGFBR1-202ENST00000374994 ALKBH5Q6P6C2 394 aaKnown RBP23.01■■□□□ 1.27
TGFBR1-202ENST00000374994 WDR11Q9BZH6 1224 aa23.01■■□□□ 1.27
TGFBR1-202ENST00000374994 ZMYND12Q9H0C1 365 aa23.01■■□□□ 1.27
TGFBR1-202ENST00000374994 PABPC4Q13310 644 aaKnown RBP eCLIP23.01■■□□□ 1.27
TGFBR1-202ENST00000374994 CPXCR1Q8N123 301 aa23.01■■□□□ 1.27
TGFBR1-202ENST00000374994 NOP56O00567 594 aaKnown RBP23■■□□□ 1.27
TGFBR1-202ENST00000374994 SETSIPP0DME0 302 aa23■■□□□ 1.27
TGFBR1-202ENST00000374994 CERKLQ49MI3 558 aaPredicted RBP23■■□□□ 1.27
TGFBR1-202ENST00000374994 PVALEFA0A1B0GWK0 134 aa23■■□□□ 1.27
TGFBR1-202ENST00000374994 GRID2IPA4D2P6 1211 aa23■■□□□ 1.27
TGFBR1-202ENST00000374994 TACC3Q9Y6A5 838 aa23■■□□□ 1.27
TGFBR1-202ENST00000374994 NCOA3Q9Y6Q9 1424 aa23■■□□□ 1.27
TGFBR1-202ENST00000374994 DMP1Q13316 513 aaPredicted RBP23■■□□□ 1.27
TGFBR1-202ENST00000374994 ZNF653Q96CK0 615 aa23■■□□□ 1.27
TGFBR1-202ENST00000374994 CTIFO43310 598 aaKnown RBP23■■□□□ 1.27
TGFBR1-202ENST00000374994 HIBCHQ6NVY1 386 aaPredicted RBP23■■□□□ 1.27
TGFBR1-202ENST00000374994 PODXLO00592 558 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 TTLL1O95922 423 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 CCZ1BP86790 482 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 CCZ1P86791 482 aaPredicted RBP22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 VIPAS39Q9H9C1 493 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 MIF4GDA9UHW6 222 aaKnown RBP22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 TCP10Q12799 353 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 GCNT4Q9P109 453 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 ANAPC5Q9UJX4 755 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 KRT19P08727 400 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 ABCD1P33897 745 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 PDE6BP35913 854 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 SLC12A2P55011 1212 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 ARHGAP4P98171 946 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 ZYXQ15942 572 aaKnown RBP22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 LRCH2Q5VUJ6 765 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 MAP7D3Q8IWC1 876 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 GDAQ9Y2T3 454 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 JPH2Q9BR39 696 aaPredicted RBP22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 XDHP47989 1333 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 RNF8O76064 485 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 KRT81Q14533 505 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 RBBP5Q15291 538 aaKnown RBP22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 RNF34Q969K3 372 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 ACCSQ96QU6 501 aa22.99■■□□□ 1.27
TGFBR1-202ENST00000374994 MAPK4P31152 587 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 RASGRF1Q13972 1273 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 SGMS1Q86VZ5 419 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 NACC1Q96RE7 527 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 DYNLL1P63167 89 aaKnown RBP22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 CYP4A11Q02928 519 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 CDC25AP30304 524 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 GGCXP38435 758 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 CUL4BQ13620 913 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 NAA30Q147X3 362 aaPredicted RBP22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 CDKL2Q92772 493 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 PLAAQ9Y263 795 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 ABCC3O15438 1527 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 ALCAMQ13740 583 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 PIGSQ96S52 555 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 EDEM3Q9BZQ6 932 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 LRRC7Q96NW7 1537 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 TNNC2P02585 160 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 TBC1D10CQ8IV04 446 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 ZBTB8OSQ8IWT0 167 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 CCDC127Q96BQ5 260 aa22.98■■□□□ 1.27
TGFBR1-202ENST00000374994 INHBAP08476 426 aa22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 DDIT3P35638 169 aa22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 E2F5Q15329 346 aa22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 PDZD4Q76G19 769 aaPredicted RBP22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 EPHA10Q5JZY3 1008 aa22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 RASIP1Q5U651 963 aa22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 PTPN22Q9Y2R2 807 aa22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 MCAMP43121 646 aa22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 SLC7A5Q01650 507 aa22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 MRPL47Q9HD33 250 aaKnown RBP22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 THEGQ9P2T0 379 aa22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 OPHN1O60890 802 aa22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 BAG2O95816 211 aa22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 PDCLQ13371 301 aa22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 TTLL11Q8NHH1 800 aa22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 COG1Q8WTW3 980 aa22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.97■■□□□ 1.273e-6■■■■■ 50.8
TGFBR1-202ENST00000374994 TRIM4Q9C037 500 aa22.97■■□□□ 1.27
TGFBR1-202ENST00000374994 PLA2G4BP0C869 781 aa22.96■■□□□ 1.27
TGFBR1-202ENST00000374994 CYP2C19P33261 490 aa22.96■■□□□ 1.27
TGFBR1-202ENST00000374994 GYS2P54840 703 aa22.96■■□□□ 1.27
TGFBR1-202ENST00000374994 ADAMTS1Q9UHI8 967 aa22.96■■□□□ 1.27
TGFBR1-202ENST00000374994 CLTCL1P53675 1640 aa22.96■■□□□ 1.27
TGFBR1-202ENST00000374994 ARAP3Q8WWN8 1544 aa22.96■■□□□ 1.27
TGFBR1-202ENST00000374994 PFKFB3Q16875 520 aaPredicted RBP22.96■■□□□ 1.27
TGFBR1-202ENST00000374994 POC1B-GALNT4F8VUJ3 575 aa22.96■■□□□ 1.27
TGFBR1-202ENST00000374994 GFPT2O94808 682 aa22.96■■□□□ 1.27
TGFBR1-202ENST00000374994 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.96■■□□□ 1.274e-6■■□□□ 13.3
TGFBR1-202ENST00000374994 MADDQ8WXG6 1647 aa22.96■■□□□ 1.27
TGFBR1-202ENST00000374994 E4F1Q66K89 784 aaPredicted RBP22.96■■□□□ 1.27
TGFBR1-202ENST00000374994 GOLGA8QA0A0J9YX86 632 aa22.95■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms