RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 SPA17Q15506 151 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 UAP1Q16222 522 aaPredicted RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 MEA1Q16626 185 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 IQCKQ8N0W5 287 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 CCDC24Q8N4L8 307 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 SPIRE2Q8WWL2 714 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 WASF1Q92558 559 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 CYFIP2Q96F07 1278 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 LBHD1Q9BQE6 289 aaPredicted RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 FGFBP2Q9BYJ0 223 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 CELF4Q9BZC1 486 aaKnown RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 EPN3Q9H201 632 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 SEMA6BQ9H3T3 888 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 MCM8Q9UJA3 840 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 THRAP3Q9Y2W1 955 aaKnown RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 PDS5AQ29RF7 1337 aaKnown RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 ARHGAP23Q9P227 1491 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 A8MUI8 341 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 GOLGA8KD6RF30 607 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 IPO7O95373 1038 aaKnown RBP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 PLCG1P19174 1290 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 KLRC1P26715 233 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 CYLC1P35663 651 aaPredicted RBP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 MDH1P40925 334 aaKnown RBP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 MAGEA1P43355 309 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 APLP1P51693 650 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 ERVK-9P63128 1117 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 TUBB2AQ13885 445 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 SLC35G1Q2M3R5 365 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 CYB5D1Q6P9G0 228 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 METTL3Q86U44 580 aaKnown RBP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 RPAINQ86UA6 219 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 IQCA1Q86XH1 822 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 MMGT1Q8N4V1 131 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 STAMBPL1Q96FJ0 436 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 FAXDC2Q96IV6 333 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 PURBQ96QR8 312 aaKnown RBP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 ISCA1Q9BUE6 129 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 TUBB2BQ9BVA1 445 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 TANGO6Q9C0B7 1094 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 DPH5Q9H2P9 285 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 BSDC1Q9NW68 430 aaPredicted RBP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 ZNHIT6Q9NWK9 470 aaKnown RBP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 MAGEC2Q9UBF1 373 aaPredicted RBP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 BAIAP2L1Q9UHR4 511 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 LEMD3Q9Y2U8 911 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 PKD1L3Q7Z443 1732 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 WDR19Q8NEZ3 1342 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 USP17L12C9JPN9 530 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 USP17L21D6R901 530 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 H7C1D1 291 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 OPA1O60313 960 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 TLR2O60603 784 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 TACC1O75410 805 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 LGR5O75473 907 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 RASSF9O75901 435 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 FSBPO95073 299 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 KLRK1P26718 216 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 CTSWP56202 376 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 ASIC1P78348 528 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 TROAPQ12815 778 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 ITGB3BPQ13352 177 aaPredicted RBP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 NAA25Q14CX7 972 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 TXNRD1Q16881 649 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 ODF2Q5BJF6 829 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 FAM133BQ5BKY9 247 aaKnown RBP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 AMOTL1Q8IY63 956 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 C4orf32Q8N8J7 132 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 KIAA0895Q8NCT3 520 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 ZNF384Q8TF68 577 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 STAG1Q8WVM7 1258 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 TCP11Q8WWU5 503 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 PRCCQ92733 491 aaPredicted RBP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 MIEF2Q96C03 454 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 ZSCAN10Q96SZ4 725 aaPredicted RBP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 KRT23Q9C075 422 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 DDX47Q9H0S4 455 aaKnown RBP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 BCAS3Q9H6U6 928 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 VCPKMTQ9H867 229 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 DISC1Q9NRI5 854 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 NOVA2Q9UNW9 492 aaKnown RBP5.98□□□□□ -1.45
ATG4A-204ENST00000372246 BCS1LQ9Y276 419 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 NR2E1Q9Y466 385 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 BCL9LQ86UU0 1499 aa5.98□□□□□ -1.45
ATG4A-204ENST00000372246 GOLGA6L7A0A1B0GV03 622 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 ANKRD18BA2A2Z9 1011 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 BUB1BO60566 1050 aaPredicted RBP5.97□□□□□ -1.45
ATG4A-204ENST00000372246 CSF1RP07333 972 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 ACTN1P12814 892 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 RDXP35241 583 aaKnown RBP5.97□□□□□ -1.45
ATG4A-204ENST00000372246 HSD17B3P37058 310 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 TECP42680 631 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 CCNHP51946 323 aaPredicted RBP5.97□□□□□ -1.45
ATG4A-204ENST00000372246 SKOR1P84550 965 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 ZBED6P86452 979 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 TJAP1Q5JTD0 557 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 NLRP10Q86W26 655 aa5.97□□□□□ -1.45
ATG4A-204ENST00000372246 SLF2Q8IX21 1173 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms