RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 RAB3IPQ96QF0 476 aaPredicted RBP14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 MMS19Q96T76 1030 aa14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 PPANQ9NQ55 473 aaKnown RBP14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 MED14O60244 1454 aa14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 N4BP1O75113 896 aaKnown RBP14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 KRT7P08729 469 aa14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 KMT5BQ4FZB7 885 aa14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 KIAA1024Q9UPX6 916 aa14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 HYOU1Q9Y4L1 999 aa14.52□□□□□ -0.09
RAPGEF1-201ENST00000372189 RNF40O75150 1001 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 MAIP1Q8WWC4 291 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 USP28Q96RU2 1077 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 RPS6KC1Q96S38 1066 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 ANKFY1Q9P2R3 1169 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 SPATA31A5Q5VU36 1347 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 SPATA31A7Q8IWB4 1347 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 TYW1BQ6NUM6 668 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 ARMCX5Q6P1M9 558 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 COA7Q96BR5 231 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 WRNIP1Q96S55 665 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 ATP6V1E1P36543 226 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 CCDC125Q86Z20 511 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 DCAF4Q8WV16 495 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 NSMCE1Q8WV22 266 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 IQCA1LA6NCM1 817 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 CTNNA1P35221 906 aaKnown RBP14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 ABI1Q8IZP0 508 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 SLC7A3Q8WY07 619 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 HAUS2Q9NVX0 235 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 ODF2LQ9ULJ1 636 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 USTQ9Y2C2 406 aa14.51□□□□□ -0.09
RAPGEF1-201ENST00000372189 RASA3Q14644 834 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 SYMPKQ92797 1274 aaKnown RBP14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 ZSWIM5Q9P217 1185 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 DIP2AQ14689 1571 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 PNMA6FA0A0J9YX94 578 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 CHRNA5P30532 468 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 MRRFQ96E11 262 aaKnown RBP14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 LSM14BQ9BX40 385 aaKnown RBP14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 PYCARDQ9ULZ3 195 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 GTPBP6O43824 516 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 TMEM191BP0C7N4 346 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 ITIH3Q06033 890 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 CCDC105Q8IYK2 499 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 PGBD1Q96JS3 809 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 LRFN2Q9ULH4 789 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 ZHX2Q9Y6X8 837 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 KCNJ18B7U540 433 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 I3L4J1 428 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 RGS16O15492 202 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 LUC7L3O95232 432 aaKnown RBP14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 CMA1P23946 247 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 PRDX5P30044 214 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 SLC8A1P32418 973 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 KCNJ12Q14500 433 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 RASGRP4Q8TDF6 673 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 TRIM55Q9BYV6 548 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 MAGEF1Q9HAY2 307 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 RRAGAQ7L523 313 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 EEPD1Q7L9B9 569 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 SDCCAG8Q86SQ7 713 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 TBCKQ8TEA7 893 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 SPDL1Q96EA4 605 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 GDAP1L1Q96MZ0 367 aa14.5□□□□□ -0.09
RAPGEF1-201ENST00000372189 USP17L5A8MUK1 530 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 APBA1Q02410 837 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 RASEFQ8IZ41 740 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 CXorf38Q8TB03 319 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 RABGGTAQ92696 567 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 DESI2Q9BSY9 194 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 FBXO18Q8NFZ0 1043 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 STRBPQ96SI9 672 aaKnown RBP14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 C1orf112Q9NSG2 853 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 HOXC10Q9NYD6 342 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 MROH7-TTC4A0A0A0MT08 1334 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 LGSNQ5TDP6 509 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 APOL6Q9BWW8 343 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 CEP170BQ9Y4F5 1589 aaPredicted RBP14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 SPECC1L-ADORA2AF8WAN1 911 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 ODR4Q5SWX8 454 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 PPP1R21Q6ZMI0 780 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 HGSO14964 777 aaPredicted RBP14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 PRPF3O43395 683 aaKnown RBP14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 RPN1P04843 607 aaKnown RBP14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 GUCY2FP51841 1108 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 MORC3Q14149 939 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 LONRF2Q1L5Z9 754 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 ZNF710Q8N1W2 664 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 MARCH10Q8NA82 808 aaPredicted RBP14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 TDRD7Q8NHU6 1098 aaKnown RBP14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 PPP1R13BQ96KQ4 1090 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 CLIC6Q96NY7 704 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 SH3GL3Q99963 347 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 HAUS4Q9H6D7 363 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 CLIC4Q9Y696 253 aa14.49□□□□□ -0.09
RAPGEF1-201ENST00000372189 A0A0G2JLW4 131 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 ZBTB24O43167 697 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 XPOTO43592 962 aaKnown RBP14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 PPP2R5EQ16537 467 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 POMGNT1Q8WZA1 660 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms