RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 OTULINQ96BN8 352 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 MYH6P13533 1939 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 MSH6P52701 1360 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 FAM83GA6ND36 823 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 MESDQ14696 234 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 CDH24Q86UP0 819 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 ANKRD44Q8N8A2 993 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 ST5P78524 1137 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 ANGEL1Q9UNK9 670 aaKnown RBP16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 ITM2BQ9Y287 266 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 FBXW4P57775 412 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 NBPF5PQ86XG9 351 aaPredicted RBP16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 USP28Q96RU2 1077 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 KDRP35968 1356 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 KLC1Q07866 573 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 ASXL1Q8IXJ9 1541 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 CHEK2O96017 543 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 GGCXP38435 758 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 MECOMQ03112 1051 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 C1orf112Q9NSG2 853 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 IQANK1A0A1B0GTG1 560 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 B4E1Z4 1266 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 CUL1Q13616 776 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 TMEM154Q6P9G4 183 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 DNAAF3Q8N9W5 541 aa16.5■□□□□ 0.23
GTF3C4-201ENST00000372146 GOLGA8IPA6NC78 632 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 NCAPG2Q86XI2 1143 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 KLHL31Q9H511 634 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 PARP3Q9Y6F1 533 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 HSPA4LO95757 839 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 CA4P22748 312 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 TMPRSS15P98073 1019 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 TEDDM1Q5T9Z0 273 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 BZW1Q7L1Q6 419 aaKnown RBP16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 CATSPER1Q8NEC5 780 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 GINS4Q9BRT9 223 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 ARHGEF11O15085 1522 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 CFAP73A6NFT4 308 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 PIK3CAP42336 1068 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 FANCLQ9NW38 375 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 NFU1Q9UMS0 254 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 SLC26A7Q8TE54 656 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 ABHD8Q96I13 439 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 EPAS1Q99814 870 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 TCHHQ07283 1943 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 NEK9Q8TD19 979 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 GEMIN8Q9NWZ8 242 aaKnown RBP16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 DONSONQ9NYP3 566 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 SUGT1Q9Y2Z0 365 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 ABL1P00519 1130 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 CYGBQ8WWM9 190 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 TMEM245Q9H330 911 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 ZNF263O14978 683 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 ATP2B4P23634 1241 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 DR1Q01658 176 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 GPT2Q8TD30 523 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 MTBPQ96DY7 904 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 SLC38A10Q9HBR0 1119 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 ABCB6Q9NP58 842 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 ABCF3Q9NUQ8 709 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 INPP5FQ9Y2H2 1132 aa16.49■□□□□ 0.23
GTF3C4-201ENST00000372146 CCDC149Q6ZUS6 474 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 PHF21AQ96BD5 680 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 TRIM25Q14258 630 aaKnown RBP16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 SUN2Q9UH99 717 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 ZBTB10Q96DT7 871 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 CASP14P31944 242 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 TGS1Q96RS0 853 aaKnown RBP16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 CYP4F11Q9HBI6 524 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 KDM3AQ9Y4C1 1321 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 TPP2P29144 1249 aaPredicted RBP16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 TRIM16LQ309B1 348 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 CCDC144BQ3MJ40 725 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 FBXW10Q5XX13 1052 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 PATL1Q86TB9 770 aaKnown RBP16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 SNX25Q9H3E2 840 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 UNC13AQ9UPW8 1703 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 DYNLT1P63172 113 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 KIF23Q02241 960 aaPredicted RBP16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 ACAD11Q709F0 780 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 MMS19Q96T76 1030 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 SIKE1Q9BRV8 207 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 PA2G4Q9UQ80 394 aaKnown RBP16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 TRIP13Q15645 432 aaPredicted RBP16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 SMCR8Q8TEV9 937 aaPredicted RBP16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 RPS6KC1Q96S38 1066 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 OLFML3Q9NRN5 406 aa16.48■□□□□ 0.23
GTF3C4-201ENST00000372146 CABP7Q86V35 215 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 TTC17Q96AE7 1141 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 CCPG1Q9ULG6 757 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 ZNF555Q8NEP9 628 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 PKD2L2Q9NZM6 624 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 SAP30BPQ9UHR5 308 aaKnown RBP16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 AARSP49588 968 aaKnown RBP eCLIP16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 IFRD2Q12894 506 aaPredicted RBP16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 CC2D2BQ6DHV5 1058 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 KCNH5Q8NCM2 988 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 EXT2Q93063 718 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 MAP3K1Q13233 1512 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms