RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 ICAM3P32942 547 aa18.63■□□□□ 0.57
VMA21-202ENST00000370361 KIAA0753Q2KHM9 967 aa18.63■□□□□ 0.57
VMA21-202ENST00000370361 SLC35G1Q2M3R5 365 aa18.63■□□□□ 0.57
VMA21-202ENST00000370361 BMP2KLQ5H9B9 411 aa18.63■□□□□ 0.57
VMA21-202ENST00000370361 PPP2R2DQ66LE6 453 aa18.63■□□□□ 0.57
VMA21-202ENST00000370361 GDF6Q6KF10 455 aaPredicted RBP18.63■□□□□ 0.57
VMA21-202ENST00000370361 NFXL1Q6ZNB6 911 aa18.63■□□□□ 0.57
VMA21-202ENST00000370361 LRRC8DQ7L1W4 858 aa18.63■□□□□ 0.57
VMA21-202ENST00000370361 CENPQQ7L2Z9 268 aaPredicted RBP18.63■□□□□ 0.57
VMA21-202ENST00000370361 VWCEQ96DN2 955 aa18.63■□□□□ 0.57
VMA21-202ENST00000370361 INPP4AQ96PE3 977 aaPredicted RBP18.63■□□□□ 0.57
VMA21-202ENST00000370361 FTOQ9C0B1 505 aaKnown RBP eCLIP18.63■□□□□ 0.57
VMA21-202ENST00000370361 LSG1Q9H089 658 aaKnown RBP18.63■□□□□ 0.57
VMA21-202ENST00000370361 NKX2-4Q9H2Z4 354 aa18.63■□□□□ 0.57
VMA21-202ENST00000370361 MLXIPQ9HAP2 919 aa18.63■□□□□ 0.57
VMA21-202ENST00000370361 MYH7BA7E2Y1 1941 aa18.62■□□□□ 0.57
VMA21-202ENST00000370361 BAZ2BQ9UIF8 2168 aaKnown RBP18.62■□□□□ 0.57
VMA21-202ENST00000370361 FIBPO43427 364 aa18.62■□□□□ 0.57
VMA21-202ENST00000370361 UBA1P22314 1058 aaKnown RBP18.62■□□□□ 0.57
VMA21-202ENST00000370361 CHMP4BP1P59074 171 aa18.62■□□□□ 0.57
VMA21-202ENST00000370361 FCHSD1Q86WN1 690 aa18.62■□□□□ 0.57
VMA21-202ENST00000370361 GIMAP8Q8ND71 665 aaPredicted RBP18.62■□□□□ 0.57
VMA21-202ENST00000370361 SMARCC2Q8TAQ2 1214 aa18.62■□□□□ 0.57
VMA21-202ENST00000370361 USP26Q9BXU7 913 aa18.62■□□□□ 0.57
VMA21-202ENST00000370361 SENP2Q9HC62 589 aa18.62■□□□□ 0.57
VMA21-202ENST00000370361 HDAC6Q9UBN7 1215 aa18.62■□□□□ 0.57
VMA21-202ENST00000370361 TAF6LQ9Y6J9 622 aa18.62■□□□□ 0.57
VMA21-202ENST00000370361 EMSYQ7Z589 1322 aa18.62■□□□□ 0.57
VMA21-202ENST00000370361 GBF1Q92538 1859 aa18.62■□□□□ 0.57
VMA21-202ENST00000370361 SH2B2O14492 632 aaPredicted RBP18.61■□□□□ 0.57
VMA21-202ENST00000370361 SLC27A2O14975 620 aa18.61■□□□□ 0.57
VMA21-202ENST00000370361 KCNJ6P48051 423 aa18.61■□□□□ 0.57
VMA21-202ENST00000370361 NECTIN1Q15223 517 aa18.61■□□□□ 0.57
VMA21-202ENST00000370361 PCNX4Q63HM2 1172 aa18.61■□□□□ 0.57
VMA21-202ENST00000370361 CNKSR3Q6P9H4 555 aa18.61■□□□□ 0.57
VMA21-202ENST00000370361 METTL7BQ6UX53 244 aa18.61■□□□□ 0.57
VMA21-202ENST00000370361 CDHR1Q96JP9 859 aa18.61■□□□□ 0.57
VMA21-202ENST00000370361 SENP7Q9BQF6 1050 aa18.61■□□□□ 0.57
VMA21-202ENST00000370361 COL25A1Q9BXS0 654 aaPredicted RBP18.61■□□□□ 0.57
VMA21-202ENST00000370361 PRDM12Q9H4Q4 367 aa18.61■□□□□ 0.57
VMA21-202ENST00000370361 YBX2Q9Y2T7 364 aaKnown RBP18.61■□□□□ 0.57
VMA21-202ENST00000370361 SLC12A7Q9Y666 1083 aa18.61■□□□□ 0.57
VMA21-202ENST00000370361 EYSQ5T1H1 3165 aa18.61■□□□□ 0.57
VMA21-202ENST00000370361 SCN5AQ14524 2016 aa18.61■□□□□ 0.57
VMA21-202ENST00000370361 NOP56O00567 594 aaKnown RBP18.6■□□□□ 0.57
VMA21-202ENST00000370361 CAND2O75155 1236 aa18.6■□□□□ 0.57
VMA21-202ENST00000370361 CXCL10P02778 98 aa18.6■□□□□ 0.57
VMA21-202ENST00000370361 ZNF286BP0CG31 522 aa18.6■□□□□ 0.57
VMA21-202ENST00000370361 GNAT1P11488 350 aa18.6■□□□□ 0.57
VMA21-202ENST00000370361 CKBP12277 381 aa18.6■□□□□ 0.57
VMA21-202ENST00000370361 HSDL1Q3SXM5 330 aa18.6■□□□□ 0.57
VMA21-202ENST00000370361 CREB3L3Q68CJ9 461 aa18.6■□□□□ 0.57
VMA21-202ENST00000370361 SGMS1Q86VZ5 419 aa18.6■□□□□ 0.57
VMA21-202ENST00000370361 IL31RAQ8NI17 732 aa18.6■□□□□ 0.57
VMA21-202ENST00000370361 CTAGE1Q96RT6 745 aa18.6■□□□□ 0.57
VMA21-202ENST00000370361 TSPYL2Q9H2G4 693 aaPredicted RBP18.6■□□□□ 0.57
VMA21-202ENST00000370361 ANO2Q9NQ90 1003 aa18.6■□□□□ 0.57
VMA21-202ENST00000370361 MYO9BQ13459 2157 aa18.59■□□□□ 0.57
VMA21-202ENST00000370361 TRIP12Q14669 1992 aaPredicted RBP18.59■□□□□ 0.57
VMA21-202ENST00000370361 ABHD14A-ACY1A0A1B0GW23 586 aa18.59■□□□□ 0.57
VMA21-202ENST00000370361 SPATA31C2B4DYI2 1134 aa18.59■□□□□ 0.57
VMA21-202ENST00000370361 SYNE3Q6ZMZ3 975 aa18.59■□□□□ 0.57
VMA21-202ENST00000370361 NLRX1Q86UT6 975 aa18.59■□□□□ 0.57
VMA21-202ENST00000370361 HERC6Q8IVU3 1022 aa18.59■□□□□ 0.57
VMA21-202ENST00000370361 ATXN2LQ8WWM7 1075 aaKnown RBP18.59■□□□□ 0.57
VMA21-202ENST00000370361 ALG1Q9BT22 464 aa18.59■□□□□ 0.57
VMA21-202ENST00000370361 ZNF215Q9UL58 517 aaPredicted RBP18.59■□□□□ 0.57
VMA21-202ENST00000370361 H3BRB1 525 aa18.58■□□□□ 0.56
VMA21-202ENST00000370361 RABGGTBP53611 331 aa18.58■□□□□ 0.56
VMA21-202ENST00000370361 SP2Q02086 613 aa18.58■□□□□ 0.56
VMA21-202ENST00000370361 TJAP1Q5JTD0 557 aa18.58■□□□□ 0.56
VMA21-202ENST00000370361 DHX38Q92620 1227 aaKnown RBP18.58■□□□□ 0.56
VMA21-202ENST00000370361 C16orf70Q9BSU1 422 aa18.58■□□□□ 0.56
VMA21-202ENST00000370361 TUT1Q9H6E5 874 aaKnown RBP18.58■□□□□ 0.56
VMA21-202ENST00000370361 EHMT1Q9H9B1 1298 aa18.58■□□□□ 0.56
VMA21-202ENST00000370361 RBM28Q9NW13 759 aaKnown RBP18.58■□□□□ 0.56
VMA21-202ENST00000370361 CHD9Q3L8U1 2897 aa18.57■□□□□ 0.56
VMA21-202ENST00000370361 PRUNE2Q8WUY3 3088 aa18.57■□□□□ 0.56
VMA21-202ENST00000370361 MAFGO15525 162 aa18.57■□□□□ 0.56
VMA21-202ENST00000370361 POU3F3P20264 500 aaPredicted RBP18.57■□□□□ 0.56
VMA21-202ENST00000370361 HOXC8P31273 242 aa18.57■□□□□ 0.56
VMA21-202ENST00000370361 MRPS9P82933 396 aaKnown RBP18.57■□□□□ 0.56
VMA21-202ENST00000370361 KRT32Q14532 448 aa18.57■□□□□ 0.56
VMA21-202ENST00000370361 SERINC5Q86VE9 423 aa18.57■□□□□ 0.56
VMA21-202ENST00000370361 GPRASP2Q96D09 838 aa18.57■□□□□ 0.56
VMA21-202ENST00000370361 MYL10Q9BUA6 226 aa18.57■□□□□ 0.56
VMA21-202ENST00000370361 PSTPIP2Q9H939 334 aa18.57■□□□□ 0.56
VMA21-202ENST00000370361 THEGQ9P2T0 379 aa18.57■□□□□ 0.56
VMA21-202ENST00000370361 C17orf102A2RUQ5 167 aa18.56■□□□□ 0.56
VMA21-202ENST00000370361 hCG_1984214I3L0E3 225 aa18.56■□□□□ 0.56
VMA21-202ENST00000370361 MEIS2O14770 477 aa18.56■□□□□ 0.56
VMA21-202ENST00000370361 GTPBP6O43824 516 aaPredicted RBP18.56■□□□□ 0.56
VMA21-202ENST00000370361 LGALS2P05162 132 aa18.56■□□□□ 0.56
VMA21-202ENST00000370361 CA3P07451 260 aa18.56■□□□□ 0.56
VMA21-202ENST00000370361 HMGB1P09429 215 aaKnown RBP18.56■□□□□ 0.56
VMA21-202ENST00000370361 IGFBP4P22692 258 aa18.56■□□□□ 0.56
VMA21-202ENST00000370361 RCAN1P53805 252 aa18.56■□□□□ 0.56
VMA21-202ENST00000370361 WDR5P61964 334 aaKnown RBP18.56■□□□□ 0.56
VMA21-202ENST00000370361 IKBKEQ14164 716 aa18.56■□□□□ 0.56
VMA21-202ENST00000370361 TSGA10IPQ3SY00 556 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms