RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 UAP1Q16222 522 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-201ENST00000369407 MAN2A1Q16706 1144 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 ASTE1Q2TB18 679 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-201ENST00000369407 MMTAG2Q9BU76 263 aaKnown RBP13.53□□□□□ -0.24
PHGDH-201ENST00000369407 IL17RBQ9NRM6 502 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 MCM9Q9NXL9 1143 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 STX8Q9UNK0 236 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 COL1A1P02452 1464 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-201ENST00000369407 A0A087X0T9 212 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 LCA5LO95447 670 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 FAM228BP0C875 321 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 KIF5BP33176 963 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 CTNNA1P35221 906 aaKnown RBP13.53□□□□□ -0.24
PHGDH-201ENST00000369407 CNNM4Q6P4Q7 775 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 ZNF34Q8IZ26 560 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 SLC44A5Q8NCS7 719 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 MDM1Q8TC05 714 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 LSM14BQ9BX40 385 aaKnown RBP13.53□□□□□ -0.24
PHGDH-201ENST00000369407 BRIP1Q9BX63 1249 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 TFCP2L1Q9NZI6 479 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 DUOX1Q9NRD9 1551 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 GCOM1H8Y6P7 765 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-201ENST00000369407 M0R2N6 131 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 CEP104O60308 925 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 RASSF9O75901 435 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 MYZAPP0CAP1 466 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 TNFRSF8P28908 595 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 SMTNP53814 917 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 CDC37Q16543 378 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-201ENST00000369407 CENPPQ6IPU0 288 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 FAM133AQ8N9E0 248 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 C7orf25Q9BPX7 421 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 TRIM31Q9BZY9 425 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 DDX47Q9H0S4 455 aaKnown RBP13.53□□□□□ -0.24
PHGDH-201ENST00000369407 TMBIM4Q9HC24 238 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 NOVA2Q9UNW9 492 aaKnown RBP13.53□□□□□ -0.24
PHGDH-201ENST00000369407 RPSAP08865 295 aaKnown RBP13.52□□□□□ -0.24
PHGDH-201ENST00000369407 PRDX5P30044 214 aa13.52□□□□□ -0.24
PHGDH-201ENST00000369407 MECOMQ03112 1051 aa13.52□□□□□ -0.24
PHGDH-201ENST00000369407 GLE1Q53GS7 698 aaKnown RBP13.52□□□□□ -0.24
PHGDH-201ENST00000369407 FAM228AQ86W67 206 aa13.52□□□□□ -0.24
PHGDH-201ENST00000369407 NUDT12Q9BQG2 462 aa13.52□□□□□ -0.24
PHGDH-201ENST00000369407 TMEM260Q9NX78 707 aa13.52□□□□□ -0.24
PHGDH-201ENST00000369407 BIN2Q9UBW5 565 aaPredicted RBP13.52□□□□□ -0.24
PHGDH-201ENST00000369407 ODF2LQ9ULJ1 636 aa13.52□□□□□ -0.24
PHGDH-201ENST00000369407 UBR2Q8IWV8 1755 aa13.52□□□□□ -0.25
PHGDH-201ENST00000369407 GMNCA6NCL1 334 aa13.52□□□□□ -0.25
PHGDH-201ENST00000369407 HMGB1P1B2RPK0 211 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-201ENST00000369407 PJA2O43164 708 aa13.52□□□□□ -0.25
PHGDH-201ENST00000369407 PEX19P40855 299 aa13.52□□□□□ -0.25
PHGDH-201ENST00000369407 CACNB1Q02641 598 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-201ENST00000369407 DDR1Q08345 913 aa13.52□□□□□ -0.25
PHGDH-201ENST00000369407 CCDC152Q4G0S7 254 aa13.52□□□□□ -0.25
PHGDH-201ENST00000369407 FAM83BQ5T0W9 1011 aa13.52□□□□□ -0.25
PHGDH-201ENST00000369407 NELFCDQ8IXH7 590 aa13.52□□□□□ -0.25
PHGDH-201ENST00000369407 INPP4AQ96PE3 977 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-201ENST00000369407 ALS2Q96Q42 1657 aa13.52□□□□□ -0.25
PHGDH-201ENST00000369407 SLIT2O94813 1529 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 GRID2IPA4D2P6 1211 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 POTEMA6NI47 508 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 STXBP3O00186 592 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 NF2P35240 595 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 NAPAP54920 295 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 ZNF844Q08AG5 666 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 SLC9C1Q4G0N8 1177 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 SFMBT2Q5VUG0 894 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 CYB5D1Q6P9G0 228 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 C6orf89Q6UWU4 347 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 C3orf67Q6ZVT6 689 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 CCDC84Q86UT8 332 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-201ENST00000369407 RUBCNQ92622 972 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 FBXL5Q9UKA1 691 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 LEMD3Q9Y2U8 911 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 TRAF5O00463 557 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 ECHS1P30084 290 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 SARNPP82979 210 aaKnown RBP13.51□□□□□ -0.25
PHGDH-201ENST00000369407 SV2BQ7L1I2 683 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 TBC1D31Q96DN5 1066 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 FGFBP2Q9BYJ0 223 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 MAD2L2Q9UI95 211 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 A6NNZ2 444 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 KIF1CO43896 1103 aaKnown RBP13.51□□□□□ -0.25
PHGDH-201ENST00000369407 PPP1R12BO60237 982 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-201ENST00000369407 NOL4O94818 638 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 MYL1P05976 194 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 ITGA4P13612 1032 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 ELF1P32519 619 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 MAGOHP61326 146 aaKnown RBP13.51□□□□□ -0.25
PHGDH-201ENST00000369407 NEDD9Q14511 834 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 TUBB8Q3ZCM7 444 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 MEI1Q5TIA1 1274 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 KCNK18Q7Z418 384 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 SPATS2Q86XZ4 545 aaKnown RBP13.51□□□□□ -0.25
PHGDH-201ENST00000369407 PARP9Q8IXQ6 854 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 USP38Q8NB14 1042 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 MAGOHBQ96A72 148 aaKnown RBP13.51□□□□□ -0.25
PHGDH-201ENST00000369407 SEC16BQ96JE7 1060 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 DPH5Q9H2P9 285 aa13.51□□□□□ -0.25
PHGDH-201ENST00000369407 TAF1DQ9H5J8 278 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-201ENST00000369407 BLOC1S4Q9NUP1 217 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms