RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 NBPF3Q9H094 633 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 UPF3AQ9H1J1 476 aaKnown RBP17.05■□□□□ 0.32
PRDM1-203ENST00000369096 PCDHA7Q9UN72 937 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 JRKLQ9Y4A0 524 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 TNRQ92752 1358 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 NR2F2P24468 414 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 ARL4AP40617 200 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 TBCCQ15814 346 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 ANGPTL8Q6UXH0 198 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 IP6K1Q92551 441 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 SPATA17Q96L03 361 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 TXLNGQ9NUQ3 528 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 KIAA1024Q9UPX6 916 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 MAP3K19Q56UN5 1328 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 ESRRAP11474 423 aaPredicted RBP17.05■□□□□ 0.32
PRDM1-203ENST00000369096 RBM6P78332 1123 aaKnown RBP17.05■□□□□ 0.32
PRDM1-203ENST00000369096 GLE1Q53GS7 698 aaKnown RBP17.05■□□□□ 0.32
PRDM1-203ENST00000369096 KRT26Q7Z3Y9 468 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 NCAPG2Q86XI2 1143 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 EFCAB13Q8IY85 973 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 SYMPKQ92797 1274 aaKnown RBP17.05■□□□□ 0.32
PRDM1-203ENST00000369096 LMCD1Q9NZU5 365 aa17.05■□□□□ 0.32
PRDM1-203ENST00000369096 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
PRDM1-203ENST00000369096 GTPBP10A4D1E9 387 aaKnown RBP17.04■□□□□ 0.32
PRDM1-203ENST00000369096 COBLO75128 1261 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 GNL1P36915 607 aaPredicted RBP17.04■□□□□ 0.32
PRDM1-203ENST00000369096 LRRC23Q53EV4 343 aaPredicted RBP17.04■□□□□ 0.32
PRDM1-203ENST00000369096 MCF2L2Q86YR7 1114 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 NUDCD3Q8IVD9 361 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 CCDC87Q9NVE4 849 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 TEKT2Q9UIF3 430 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 PGRMC1O00264 195 aaKnown RBP17.04■□□□□ 0.32
PRDM1-203ENST00000369096 LRRN2O75325 713 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 KRT10P13645 584 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 ATP5JP18859 108 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 KRT1P04264 644 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 RPS8P62241 208 aaKnown RBP17.04■□□□□ 0.32
PRDM1-203ENST00000369096 HIPK4Q8NE63 616 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 TRIM11Q96F44 468 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 TTI1O43156 1089 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 GUCY2CP25092 1073 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 IFNL3Q8IZI9 196 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 SDR42E1Q8WUS8 393 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 NR1H4Q96RI1 486 aaPredicted RBP17.04■□□□□ 0.32
PRDM1-203ENST00000369096 CYTH2Q99418 400 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 TPCN1Q9ULQ1 816 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 INPP5FQ9Y2H2 1132 aa17.04■□□□□ 0.32
PRDM1-203ENST00000369096 INO80B-WBP1J3KQ70 363 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 NDUFA8P51970 172 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 ICA1Q05084 483 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 PABPC4Q13310 644 aaKnown RBP eCLIP17.03■□□□□ 0.32
PRDM1-203ENST00000369096 DARS2Q6PI48 645 aaKnown RBP17.03■□□□□ 0.32
PRDM1-203ENST00000369096 DNAJC10Q8IXB1 793 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 C7orf31Q8N865 590 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 GIPC2Q8TF65 315 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 INO80BQ9C086 356 aaPredicted RBP17.03■□□□□ 0.32
PRDM1-203ENST00000369096 HOXB7P09629 217 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 EPHB1P54762 984 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 TBC1D10BQ4KMP7 808 aaPredicted RBP17.03■□□□□ 0.32
PRDM1-203ENST00000369096 SERPINI1Q99574 410 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 JPH2Q9BR39 696 aaPredicted RBP17.03■□□□□ 0.32
PRDM1-203ENST00000369096 BBS9Q3SYG4 887 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 RMDN2Q96LZ7 410 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 ANGPTL2Q9UKU9 493 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 PCDHA5Q9Y5H7 936 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 PCDHA1Q9Y5I3 950 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 TFDP1Q14186 410 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 CERKLQ49MI3 558 aaPredicted RBP17.03■□□□□ 0.32
PRDM1-203ENST00000369096 PRPF38AQ8NAV1 312 aaKnown RBP17.03■□□□□ 0.32
PRDM1-203ENST00000369096 DACH2Q96NX9 599 aa17.03■□□□□ 0.32
PRDM1-203ENST00000369096 WARS2Q9UGM6 360 aaKnown RBP17.03■□□□□ 0.32
PRDM1-203ENST00000369096 TRPC5Q9UL62 973 aaPredicted RBP17.03■□□□□ 0.32
PRDM1-203ENST00000369096 ZFYVE16Q7Z3T8 1539 aa17.02■□□□□ 0.32
PRDM1-203ENST00000369096 EXOC1LA0A1B0GW35 172 aa17.02■□□□□ 0.32
PRDM1-203ENST00000369096 GADL1Q6ZQY3 521 aa17.02■□□□□ 0.32
PRDM1-203ENST00000369096 TUBB6Q9BUF5 446 aa17.02■□□□□ 0.32
PRDM1-203ENST00000369096 USP19O94966 1318 aa17.02■□□□□ 0.32
PRDM1-203ENST00000369096 A0A087WUV0 522 aaPredicted RBP17.02■□□□□ 0.32
PRDM1-203ENST00000369096 TMEM232C9JQI7 657 aa17.02■□□□□ 0.32
PRDM1-203ENST00000369096 ZNF500O60304 480 aaPredicted RBP17.02■□□□□ 0.32
PRDM1-203ENST00000369096 CHEK2O96017 543 aa17.02■□□□□ 0.32
PRDM1-203ENST00000369096 CA4P22748 312 aa17.02■□□□□ 0.32
PRDM1-203ENST00000369096 LONP1P36776 959 aaKnown RBP17.02■□□□□ 0.32
PRDM1-203ENST00000369096 FAM160B1Q5W0V3 765 aa17.02■□□□□ 0.32
PRDM1-203ENST00000369096 MAML1Q92585 1016 aa17.02■□□□□ 0.32
PRDM1-203ENST00000369096 ALKBH8Q96BT7 664 aaKnown RBP17.02■□□□□ 0.32
PRDM1-203ENST00000369096 TRAIPQ9BWF2 469 aa17.02■□□□□ 0.32
PRDM1-203ENST00000369096 SLC12A6Q9UHW9 1150 aa17.02■□□□□ 0.32
PRDM1-203ENST00000369096 SOX5P35711 763 aa17.02■□□□□ 0.32
PRDM1-203ENST00000369096 C19orf44Q9H6X5 657 aa17.02■□□□□ 0.32
PRDM1-203ENST00000369096 H3BRJ5 948 aa17.02■□□□□ 0.31
PRDM1-203ENST00000369096 SLFN13Q68D06 897 aa17.02■□□□□ 0.31
PRDM1-203ENST00000369096 GALNT17Q6IS24 598 aa17.02■□□□□ 0.31
PRDM1-203ENST00000369096 TRIM59Q8IWR1 403 aa17.02■□□□□ 0.31
PRDM1-203ENST00000369096 CEP70Q8NHQ1 597 aa17.02■□□□□ 0.31
PRDM1-203ENST00000369096 SNX25Q9H3E2 840 aa17.02■□□□□ 0.31
PRDM1-203ENST00000369096 CAPN11Q9UMQ6 739 aa17.02■□□□□ 0.31
PRDM1-203ENST00000369096 MTMR6Q9Y217 621 aa17.02■□□□□ 0.31
PRDM1-203ENST00000369096 CXCR5P32302 372 aa17.01■□□□□ 0.31
PRDM1-203ENST00000369096 BLVRAP53004 296 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms