RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 ISCUQ9H1K1 167 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 KDM4CQ9H3R0 1056 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 LUC7LQ9NQ29 371 aaKnown RBP11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 LAMB1P07942 1786 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 CASZ1Q86V15 1759 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 H0YGN5 161 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 LAD1O00515 517 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 MGRN1O60291 552 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 CALRP27797 417 aaKnown RBP11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 RASGRF1Q13972 1273 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 VWA3BQ502W6 1294 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 SLC27A3Q5K4L6 730 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 PDXDC1Q6P996 788 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 CENPHQ9H3R5 247 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 SH3GLB2Q9NR46 395 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 SALL4Q9UJQ4 1053 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 NFS1Q9Y697 457 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 ATAD5Q96QE3 1844 aa11.6□□□□□ -0.55
LYSMD1-201ENST00000368908 DNM1LO00429 736 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 FGRP09769 529 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 PRPHP41219 470 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 SCTRP47872 440 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 GUCY2FP51841 1108 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 MTMR3Q13615 1198 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 MAN2A1Q16706 1144 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 DTHD1Q6ZMT9 781 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 BAP1Q92560 729 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 SYN2Q92777 582 aaPredicted RBP11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 TATDN2Q93075 761 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 SEC16BQ96JE7 1060 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 C7orf25Q9BPX7 421 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 NUCKS1Q9H1E3 243 aaKnown RBP11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 TMEM59LQ9UK28 342 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 A0A1B0GUL6 1792 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 hCG_1642624A0A1W2PR95 340 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 FGFR1OPO95684 399 aaKnown RBP11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 PDHBP11177 359 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 SAMD1Q6SPF0 538 aaPredicted RBP11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 MAB21L3Q8N8X9 362 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 HOOK2Q96ED9 719 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 MS4A14Q96JA4 679 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 PSMB7Q99436 277 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 PPANQ9NQ55 473 aaKnown RBP11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 HAUS2Q9NVX0 235 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 LEMD3Q9Y2U8 911 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 PCDHGC5Q9Y5F6 944 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 TAF1LQ8IZX4 1826 aa11.59□□□□□ -0.55
LYSMD1-201ENST00000368908 ZSCAN5CA6NGD5 496 aaPredicted RBP11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 RTN2O75298 545 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 GSTA1P08263 222 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 HSD17B3P37058 310 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 UBA7P41226 1012 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 PPP2R2AP63151 447 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 BYSLQ13895 437 aaKnown RBP11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 MEI1Q5TIA1 1274 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 RCSD1Q6JBY9 416 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 FOXR2Q6PJQ5 311 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 BLIDQ8IZY5 108 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 SRBD1Q8N5C6 995 aaKnown RBP11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 KRT12Q99456 494 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 NDST4Q9H3R1 872 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 QSER1Q2KHR3 1735 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 CCDC88AQ3V6T2 1871 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 ESYT3A0FGR9 886 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 LRRC53A6NM62 1247 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 CLNS1AP54105 237 aaKnown RBP11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 IRX1P78414 480 aaPredicted RBP11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 EN1Q05925 392 aaPredicted RBP11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 PDE4DQ08499 809 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 NAB2Q15742 525 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 CENPPQ6IPU0 288 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 CNNM4Q6P4Q7 775 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 GIGYF2Q6Y7W6 1299 aaKnown RBP11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 CEP57Q86XR8 500 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 USP38Q8NB14 1042 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 RASSF8Q8NHQ8 419 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 CCT6BQ92526 530 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 AK8Q96MA6 479 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 TRIM9Q9C026 710 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 BATF3Q9NR55 127 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 SWAP70Q9UH65 585 aa11.58□□□□□ -0.56
LYSMD1-201ENST00000368908 FLT1P17948 1338 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 KIF13BQ9NQT8 1826 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 BAZ2AQ9UIF9 1905 aaKnown RBP11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 COL5A3P25940 1745 aaPredicted RBP11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 EPHB6O15197 1021 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 RAD51CO43502 376 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 ECHS1P30084 290 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 HPDP32754 393 aaPredicted RBP11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 SLC1A4P43007 532 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 RASSF7Q02833 373 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 ZNF844Q08AG5 666 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 QPCTQ16769 361 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 GKAP1Q5VSY0 366 aaPredicted RBP11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 LRCH2Q5VUJ6 765 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 HGSNATQ68CP4 663 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 CRELD2Q6UXH1 353 aaPredicted RBP11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 DEFB132Q7Z7B7 95 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 NLRP10Q86W26 655 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 CENPTQ96BT3 561 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms