RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 RAB44Q7Z6P3 723 aaPredicted RBP19.72■□□□□ 0.75
SNX27-202ENST00000368841 BCAS4Q8TDM0 211 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 NLRP4Q96MN2 994 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 TYW1Q9NV66 732 aaKnown RBP19.72■□□□□ 0.75
SNX27-202ENST00000368841 PLTPP55058 493 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 SGO2Q562F6 1265 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 TBCKQ8TEA7 893 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 NT5C1BQ96P26 610 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 EPB41L5Q9HCM4 733 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 TYW5A2RUC4 315 aaKnown RBP19.71■□□□□ 0.75
SNX27-202ENST00000368841 SOWAHDA6NJG2 315 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 NCF2P19878 526 aaPredicted RBP19.71■□□□□ 0.75
SNX27-202ENST00000368841 IL17REQ8NFR9 667 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 PCDHA4Q9UN74 947 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 USP17L3A6NCW0 530 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 USP17L4A6NCW7 530 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 DDAH1O94760 285 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 USP17L1Q7RTZ2 530 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 CDKL2Q92772 493 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 QTRT2Q9H974 415 aaKnown RBP19.71■□□□□ 0.75
SNX27-202ENST00000368841 ZSCAN20P17040 1043 aaPredicted RBP19.71■□□□□ 0.75
SNX27-202ENST00000368841 KCNA4P22459 653 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 CROCCP2Q86T23 111 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 CFLARO15519 480 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 VCX3AQ9NNX9 186 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 KRT82Q9NSB4 513 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 NUP160Q12769 1436 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 PFDN6O15212 129 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 PPFIA4O75335 1185 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 THOC5Q13769 683 aaKnown RBP19.71■□□□□ 0.75
SNX27-202ENST00000368841 PPP2R5BQ15173 497 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 GOLGA5Q8TBA6 731 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 MTMR6Q9Y217 621 aa19.71■□□□□ 0.75
SNX27-202ENST00000368841 POLD4Q9HCU8 107 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 GCNT4Q9P109 453 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 LARP4BQ92615 738 aaKnown RBP19.7■□□□□ 0.74
SNX27-202ENST00000368841 NCAPGQ9BPX3 1015 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 SPTLC3Q9NUV7 552 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 PLEKHG3A1L390 1219 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 H2AFZP0C0S5 128 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 H2AFVQ71UI9 128 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 USP44Q9H0E7 712 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 CPSF3Q9UKF6 684 aaKnown RBP19.7■□□□□ 0.74
SNX27-202ENST00000368841 TRMT10CQ7L0Y3 403 aaKnown RBP19.7■□□□□ 0.74
SNX27-202ENST00000368841 LCORLQ8N3X6 602 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 HOMER3Q9NSC5 361 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 APOEP02649 317 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 PTPREP23469 700 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 GCKP35557 465 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 ARHGEF18Q6ZSZ5 1173 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 PRKAG2Q9UGJ0 569 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 EPN1Q9Y6I3 576 aaPredicted RBP19.7■□□□□ 0.74
SNX27-202ENST00000368841 IFT88Q13099 833 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 E2F5Q15329 346 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 UNC5CLQ8IV45 518 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 SCYL3Q8IZE3 742 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 FAM49AQ9H0Q0 323 aaPredicted RBP19.7■□□□□ 0.74
SNX27-202ENST00000368841 SFMBT1Q9UHJ3 866 aa19.7■□□□□ 0.74
SNX27-202ENST00000368841 ZNF215Q9UL58 517 aaPredicted RBP19.7■□□□□ 0.74
SNX27-202ENST00000368841 TTC4O95801 387 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 TCP11X2Q5H9J9 407 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 AFPP02771 609 aaKnown RBP19.69■□□□□ 0.74
SNX27-202ENST00000368841 PLS3P13797 630 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 PSMC2P35998 433 aaKnown RBP19.69■□□□□ 0.74
SNX27-202ENST00000368841 CACNB3P54284 484 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 C10orf76Q5T2E6 689 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 C11orf57Q6ZUT1 292 aaPredicted RBP19.69■□□□□ 0.74
SNX27-202ENST00000368841 ARHGEF10O15013 1369 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 MYO1FO00160 1098 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 PIP4K2CQ8TBX8 421 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 ERVV-2B6SEH9 535 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 HEXIM1O94992 359 aaKnown RBP19.69■□□□□ 0.74
SNX27-202ENST00000368841 TTLL1O95922 423 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 NR5A1Q13285 461 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 TMEM259Q4ZIN3 620 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 FAM186BQ8IYM0 893 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 POLR2BP30876 1174 aaKnown RBP19.69■□□□□ 0.74
SNX27-202ENST00000368841 ZNF394Q53GI3 561 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 SPATA1Q5VX52 437 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 SPOPLQ6IQ16 392 aa19.69■□□□□ 0.74
SNX27-202ENST00000368841 HDLBPQ00341 1268 aaKnown RBP19.68■□□□□ 0.74
SNX27-202ENST00000368841 ZSWIM6Q9HCJ5 1215 aa19.68■□□□□ 0.74
SNX27-202ENST00000368841 BRD1O95696 1058 aa19.68■□□□□ 0.74
SNX27-202ENST00000368841 YWHAHQ04917 246 aaPredicted RBP19.68■□□□□ 0.74
SNX27-202ENST00000368841 SLFNL1Q499Z3 407 aa19.68■□□□□ 0.74
SNX27-202ENST00000368841 KRT26Q7Z3Y9 468 aa19.68■□□□□ 0.74
SNX27-202ENST00000368841 PASD1Q8IV76 773 aa19.68■□□□□ 0.74
SNX27-202ENST00000368841 LMCD1Q9NZU5 365 aa19.68■□□□□ 0.74
SNX27-202ENST00000368841 RETREG2Q8NC44 543 aa19.68■□□□□ 0.74
SNX27-202ENST00000368841 CARMIL3Q8ND23 1372 aa19.68■□□□□ 0.74
SNX27-202ENST00000368841 EFCAB8A8MWE9 144 aa19.68■□□□□ 0.74
SNX27-202ENST00000368841 HIP1RO75146 1068 aa19.68■□□□□ 0.74
SNX27-202ENST00000368841 CCDC51Q96ER9 411 aa19.68■□□□□ 0.74
SNX27-202ENST00000368841 ACCSQ96QU6 501 aa19.68■□□□□ 0.74
SNX27-202ENST00000368841 SLITRK6Q9H5Y7 841 aa19.68■□□□□ 0.74
SNX27-202ENST00000368841 LARSQ9P2J5 1176 aaKnown RBP19.68■□□□□ 0.74
SNX27-202ENST00000368841 BCAP29Q9UHQ4 241 aa19.68■□□□□ 0.74
SNX27-202ENST00000368841 MAN1B1Q9UKM7 699 aa19.68■□□□□ 0.74
SNX27-202ENST00000368841 SRGAP2BP0DMP2 458 aa19.67■□□□□ 0.74
SNX27-202ENST00000368841 EPHB1P54762 984 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms