RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 XBP1P17861 261 aa21.18■□□□□ 0.98
CHTOP-202ENST00000368687 FXR1P51114 621 aaKnown RBP eCLIP21.18■□□□□ 0.98
CHTOP-202ENST00000368687 MRPS9P82933 396 aaKnown RBP21.18■□□□□ 0.98
CHTOP-202ENST00000368687 ARHGAP1Q07960 439 aa21.18■□□□□ 0.98
CHTOP-202ENST00000368687 SCRN1Q12765 414 aa21.18■□□□□ 0.98
CHTOP-202ENST00000368687 GALNT17Q6IS24 598 aa21.18■□□□□ 0.98
CHTOP-202ENST00000368687 CXCL17Q6UXB2 119 aa21.18■□□□□ 0.98
CHTOP-202ENST00000368687 WASF1Q92558 559 aa21.18■□□□□ 0.98
CHTOP-202ENST00000368687 SENP7Q9BQF6 1050 aa21.18■□□□□ 0.98
CHTOP-202ENST00000368687 MTG1Q9BT17 334 aaPredicted RBP21.18■□□□□ 0.98
CHTOP-202ENST00000368687 LAMA3Q16787 3333 aa21.17■□□□□ 0.98
CHTOP-202ENST00000368687 ARVCFO00192 962 aa21.17■□□□□ 0.98
CHTOP-202ENST00000368687 TLR3O15455 904 aaKnown RBP21.17■□□□□ 0.98
CHTOP-202ENST00000368687 CLK2P49760 499 aaKnown RBP21.17■□□□□ 0.98
CHTOP-202ENST00000368687 PURAQ00577 322 aaKnown RBP21.17■□□□□ 0.98
CHTOP-202ENST00000368687 DGKDQ16760 1214 aa21.17■□□□□ 0.98
CHTOP-202ENST00000368687 LARP6Q9BRS8 491 aaKnown RBP21.17■□□□□ 0.98
CHTOP-202ENST00000368687 ANO3Q9BYT9 981 aa21.17■□□□□ 0.98
CHTOP-202ENST00000368687 SCN10AQ9Y5Y9 1956 aa21.17■□□□□ 0.98
CHTOP-202ENST00000368687 SPATA31C2B4DYI2 1134 aa21.16■□□□□ 0.98
CHTOP-202ENST00000368687 MMP3P08254 477 aa21.16■□□□□ 0.98
CHTOP-202ENST00000368687 UBA1P22314 1058 aaKnown RBP21.16■□□□□ 0.98
CHTOP-202ENST00000368687 SREBF1P36956 1147 aa21.16■□□□□ 0.98
CHTOP-202ENST00000368687 ITGA7Q13683 1181 aa21.16■□□□□ 0.98
CHTOP-202ENST00000368687 CELF3Q5SZQ8 465 aaKnown RBP21.16■□□□□ 0.98
CHTOP-202ENST00000368687 TMEM63BQ5T3F8 832 aa21.16■□□□□ 0.98
CHTOP-202ENST00000368687 COPS5Q92905 334 aa21.16■□□□□ 0.98
CHTOP-202ENST00000368687 GTF3C6Q969F1 213 aa21.16■□□□□ 0.98
CHTOP-202ENST00000368687 KATNAL1Q9BW62 490 aa21.16■□□□□ 0.98
CHTOP-202ENST00000368687 MLXIPQ9HAP2 919 aa21.16■□□□□ 0.98
CHTOP-202ENST00000368687 PQBP1O60828 265 aaKnown RBP21.15■□□□□ 0.98
CHTOP-202ENST00000368687 GGPS1O95749 300 aa21.15■□□□□ 0.98
CHTOP-202ENST00000368687 MYL3P08590 195 aa21.15■□□□□ 0.98
CHTOP-202ENST00000368687 CLTBP09497 229 aa21.15■□□□□ 0.98
CHTOP-202ENST00000368687 CDK7P50613 346 aa21.15■□□□□ 0.98
CHTOP-202ENST00000368687 IRX5P78411 483 aaPredicted RBP21.15■□□□□ 0.98
CHTOP-202ENST00000368687 TLE2Q04725 743 aa21.15■□□□□ 0.98
CHTOP-202ENST00000368687 MTMR1Q13613 665 aa21.15■□□□□ 0.98
CHTOP-202ENST00000368687 RABEP1Q15276 862 aa21.15■□□□□ 0.98
CHTOP-202ENST00000368687 MYSM1Q5VVJ2 828 aa21.15■□□□□ 0.98
CHTOP-202ENST00000368687 METTL7BQ6UX53 244 aa21.15■□□□□ 0.98
CHTOP-202ENST00000368687 SLC43A3Q8NBI5 491 aa21.15■□□□□ 0.98
CHTOP-202ENST00000368687 AFG1LQ8WV93 481 aa21.15■□□□□ 0.98
CHTOP-202ENST00000368687 LIMCH1Q9UPQ0 1083 aa21.15■□□□□ 0.98
CHTOP-202ENST00000368687 GTF3C3Q9Y5Q9 886 aa21.15■□□□□ 0.98
CHTOP-202ENST00000368687 PPFIA4O75335 1185 aa21.14■□□□□ 0.97
CHTOP-202ENST00000368687 HOXD8P13378 290 aaPredicted RBP21.14■□□□□ 0.97
CHTOP-202ENST00000368687 NLRP5P59047 1200 aa21.14■□□□□ 0.97
CHTOP-202ENST00000368687 NFRKBQ6P4R8 1299 aa21.14■□□□□ 0.97
CHTOP-202ENST00000368687 ZSCAN31Q96LW9 406 aaPredicted RBP21.14■□□□□ 0.97
CHTOP-202ENST00000368687 SPATA33Q96N06 139 aa21.14■□□□□ 0.97
CHTOP-202ENST00000368687 GDF15Q99988 308 aa21.14■□□□□ 0.97
CHTOP-202ENST00000368687 LBHD1Q9BQE6 289 aaPredicted RBP21.14■□□□□ 0.97
CHTOP-202ENST00000368687 RTEL1Q9NZ71 1219 aa21.14■□□□□ 0.97
CHTOP-202ENST00000368687 VPS54Q9P1Q0 977 aa21.14■□□□□ 0.97
CHTOP-202ENST00000368687 UBIAD1Q9Y5Z9 338 aa21.14■□□□□ 0.97
CHTOP-202ENST00000368687 SZT2Q5T011 3432 aa21.14■□□□□ 0.97
CHTOP-202ENST00000368687 A0A1W2PPC1 479 aa21.13■□□□□ 0.97
CHTOP-202ENST00000368687 NOP56O00567 594 aaKnown RBP21.13■□□□□ 0.97
CHTOP-202ENST00000368687 ST18O60284 1047 aa21.13■□□□□ 0.97
CHTOP-202ENST00000368687 PTPN11Q06124 597 aaPredicted RBP21.13■□□□□ 0.97
CHTOP-202ENST00000368687 ME3Q16798 604 aa21.13■□□□□ 0.97
CHTOP-202ENST00000368687 NIPA1Q7RTP0 329 aa21.13■□□□□ 0.97
CHTOP-202ENST00000368687 JADE2Q9NQC1 790 aa21.13■□□□□ 0.97
CHTOP-202ENST00000368687 PDLIM7Q9NR12 457 aa21.13■□□□□ 0.97
CHTOP-202ENST00000368687 SH2B1Q9NRF2 756 aaPredicted RBP21.13■□□□□ 0.97
CHTOP-202ENST00000368687 SUPT20HL2P0C7V6 817 aa21.12■□□□□ 0.97
CHTOP-202ENST00000368687 ITGB5P18084 799 aa21.12■□□□□ 0.97
CHTOP-202ENST00000368687 PTGS1P23219 599 aa21.12■□□□□ 0.97
CHTOP-202ENST00000368687 MAGEA10P43363 369 aaPredicted RBP21.12■□□□□ 0.97
CHTOP-202ENST00000368687 ARHGAP4P98171 946 aa21.12■□□□□ 0.97
CHTOP-202ENST00000368687 CEP55Q53EZ4 464 aa21.12■□□□□ 0.97
CHTOP-202ENST00000368687 DAGLBQ8NCG7 672 aa21.12■□□□□ 0.97
CHTOP-202ENST00000368687 MXRA8Q9BRK3 442 aa21.12■□□□□ 0.97
CHTOP-202ENST00000368687 PRDM5Q9NQX1 630 aaPredicted RBP21.12■□□□□ 0.97
CHTOP-202ENST00000368687 PCDHA4Q9UN74 947 aa21.12■□□□□ 0.97
CHTOP-202ENST00000368687 LTBP2Q14767 1821 aa21.11■□□□□ 0.97
CHTOP-202ENST00000368687 KIAA0355O15063 1070 aa21.11■□□□□ 0.97
CHTOP-202ENST00000368687 CYP3A4P08684 503 aa21.11■□□□□ 0.97
CHTOP-202ENST00000368687 BMP8BP34820 402 aa21.11■□□□□ 0.97
CHTOP-202ENST00000368687 ZNF76P36508 570 aa21.11■□□□□ 0.97
CHTOP-202ENST00000368687 SETQ01105 290 aaPredicted RBP21.11■□□□□ 0.97
CHTOP-202ENST00000368687 SP2Q02086 613 aa21.11■□□□□ 0.97
CHTOP-202ENST00000368687 JAKMIP3Q5VZ66 844 aa21.11■□□□□ 0.97
CHTOP-202ENST00000368687 FAM126BQ8IXS8 530 aa21.11■□□□□ 0.97
CHTOP-202ENST00000368687 KIF2CQ99661 725 aa21.11■□□□□ 0.97
CHTOP-202ENST00000368687 TMEM39AQ9NV64 488 aa21.11■□□□□ 0.97
CHTOP-202ENST00000368687 ORC3Q9UBD5 711 aaPredicted RBP21.11■□□□□ 0.97
CHTOP-202ENST00000368687 F2P00734 622 aa21.1■□□□□ 0.97
CHTOP-202ENST00000368687 FAAP100Q0VG06 881 aa21.1■□□□□ 0.97
CHTOP-202ENST00000368687 SEMA3FQ13275 785 aa21.1■□□□□ 0.97
CHTOP-202ENST00000368687 TMEM260Q9NX78 707 aa21.1■□□□□ 0.97
CHTOP-202ENST00000368687 PPFIA3O75145 1194 aa21.09■□□□□ 0.97
CHTOP-202ENST00000368687 HSDL1Q3SXM5 330 aa21.09■□□□□ 0.97
CHTOP-202ENST00000368687 CYFIP1Q7L576 1253 aa21.09■□□□□ 0.97
CHTOP-202ENST00000368687 SESTD1Q86VW0 696 aa21.09■□□□□ 0.97
CHTOP-202ENST00000368687 BLIDQ8IZY5 108 aa21.09■□□□□ 0.97
CHTOP-202ENST00000368687 CRYGNQ8WXF5 182 aa21.09■□□□□ 0.97
CHTOP-202ENST00000368687 ZFP91Q96JP5 570 aaPredicted RBP21.09■□□□□ 0.97
CHTOP-202ENST00000368687 TBC1D32Q96NH3 1257 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms