RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 SECISBP2LQ93073 1101 aaKnown RBP20.08■□□□□ 0.8
UBQLN4-201ENST00000368309 MLXIPQ9HAP2 919 aa20.08■□□□□ 0.8
UBQLN4-201ENST00000368309 CRKP46108 304 aa20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 PPP1R18Q6NYC8 613 aa20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 TMC4Q7Z404 712 aa20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 ANKRD13CQ8N6S4 541 aa20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 NEK11Q8NG66 645 aa20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 CAGE1Q8TC20 777 aa20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 PCDHA13Q9Y5I0 950 aa20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 POTEB3A0JP26 581 aa20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 POTECB2RU33 542 aa20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 PDE2AO00408 941 aaPredicted RBP20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 AKR1B10O60218 316 aa20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 POTEBQ6S5H4 581 aa20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 ZNF662Q6ZS27 426 aa20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 CCDC84Q86UT8 332 aaPredicted RBP20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 TSG101Q99816 390 aa20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 ZHX3Q9H4I2 956 aa20.07■□□□□ 0.8
UBQLN4-201ENST00000368309 KIF11P52732 1056 aa20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 CDK17Q00537 523 aa20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 NLRC4Q9NPP4 1024 aa20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 BMP2KQ9NSY1 1161 aaPredicted RBP20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 DDTLA6NHG4 134 aaPredicted RBP20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 CASP8Q14790 479 aa20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 FAM26FQ5R3K3 315 aa20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 LRRC27Q9C0I9 530 aa20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 CAPN6Q9Y6Q1 641 aa20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 PSMD2Q13200 908 aa20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 HHIPL2Q6UWX4 724 aa20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 CACNA2D4Q7Z3S7 1137 aa20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 CRACR2AQ9BSW2 395 aa20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 ZNF219Q9P2Y4 722 aaPredicted RBP20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 TRPC5Q9UL62 973 aaPredicted RBP20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 ATF5Q9Y2D1 282 aaPredicted RBP20.06■□□□□ 0.8
UBQLN4-201ENST00000368309 USP14P54578 494 aa20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 CCDC40Q4G0X9 1142 aa20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 MTMR8Q96EF0 704 aa20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 GDAP1L1Q96MZ0 367 aa20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 PSMB7Q99436 277 aa20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 UBR3Q6ZT12 1888 aa20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 MOCS3O95396 460 aa20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 TAL1P17542 331 aaPredicted RBP20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 APBA1Q02410 837 aa20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 HERC4Q5GLZ8 1057 aaPredicted RBP20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 SLFN13Q68D06 897 aa20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 PLA2G4BP0C869 781 aa20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 HNRNPH3P31942 346 aaKnown RBP20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 FKBP3Q00688 224 aaKnown RBP20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 KCNMA1Q12791 1236 aa20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 CERKLQ49MI3 558 aaPredicted RBP20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 ZNF622Q969S3 477 aaKnown RBP eCLIP20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 PURBQ96QR8 312 aaKnown RBP20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 ADAM21Q9UKJ8 722 aa20.05■□□□□ 0.8
UBQLN4-201ENST00000368309 USO1O60763 962 aaKnown RBP20.04■□□□□ 0.8
UBQLN4-201ENST00000368309 SEPT2Q15019 361 aa20.04■□□□□ 0.8
UBQLN4-201ENST00000368309 BAP1Q92560 729 aa20.04■□□□□ 0.8
UBQLN4-201ENST00000368309 LRRIQ3A6PVS8 624 aaPredicted RBP20.04■□□□□ 0.8
UBQLN4-201ENST00000368309 PHACTR2O75167 634 aa20.04■□□□□ 0.8
UBQLN4-201ENST00000368309 NPR1P16066 1061 aa20.04■□□□□ 0.8
UBQLN4-201ENST00000368309 CDC37Q16543 378 aaPredicted RBP20.04■□□□□ 0.8
UBQLN4-201ENST00000368309 GPBP1Q86WP2 473 aa20.04■□□□□ 0.8
UBQLN4-201ENST00000368309 QTRT2Q9H974 415 aaKnown RBP20.04■□□□□ 0.8
UBQLN4-201ENST00000368309 VPS18Q9P253 973 aa20.04■□□□□ 0.8
UBQLN4-201ENST00000368309 COL4A3BPQ9Y5P4 624 aa20.04■□□□□ 0.8
UBQLN4-201ENST00000368309 GCFC2P16383 781 aaKnown RBP20.04■□□□□ 0.8
UBQLN4-201ENST00000368309 FAM193AP78312 1265 aa20.04■□□□□ 0.8
UBQLN4-201ENST00000368309 GFPT1Q06210 699 aaPredicted RBP20.04■□□□□ 0.8
UBQLN4-201ENST00000368309 ANO3Q9BYT9 981 aa20.04■□□□□ 0.8
UBQLN4-201ENST00000368309 P2RX7Q99572 595 aaKnown RBP20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 GBP3Q9H0R5 595 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 TMX4Q9H1E5 349 aaPredicted RBP20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 GDF11O95390 407 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 USH1GQ495M9 461 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 ZCWPW2Q504Y3 356 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 WDR93Q6P2C0 686 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 CCDC102AQ96A19 550 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 CCDC17Q96LX7 622 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 NT5C3AQ9H0P0 336 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 POTEFA5A3E0 1075 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 MEIS1O00470 390 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 MED24O75448 989 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 KRT18P05783 430 aaKnown RBP20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 POTEIP0CG38 1075 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 CXCR5P32302 372 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 C2orf54Q08AI8 447 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 GPS2Q13227 327 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 PRR16Q569H4 304 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 POTEGQ6S5H5 508 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 POTEEQ6S8J3 1075 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 POLD4Q9HCU8 107 aa20.03■□□□□ 0.8
UBQLN4-201ENST00000368309 MYO3BQ8WXR4 1341 aa20.02■□□□□ 0.8
UBQLN4-201ENST00000368309 MAGEA1P43355 309 aa20.02■□□□□ 0.8
UBQLN4-201ENST00000368309 IKQ13123 557 aaPredicted RBP20.02■□□□□ 0.8
UBQLN4-201ENST00000368309 SIAH1Q8IUQ4 282 aa20.02■□□□□ 0.8
UBQLN4-201ENST00000368309 COG1Q8WTW3 980 aa20.02■□□□□ 0.8
UBQLN4-201ENST00000368309 TSGA10Q9BZW7 698 aa20.02■□□□□ 0.8
UBQLN4-201ENST00000368309 SH2D4AQ9H788 454 aa20.02■□□□□ 0.8
UBQLN4-201ENST00000368309 SALL4Q9UJQ4 1053 aa20.02■□□□□ 0.8
UBQLN4-201ENST00000368309 MRPS25P82663 173 aaKnown RBP20.02■□□□□ 0.8
UBQLN4-201ENST00000368309 ENOX2Q16206 610 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms