RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 MRVI1Q9Y6F6 885 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 PDE4DIPQ5VU43 2346 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 CNTNAP5Q8WYK1 1306 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 A0A0U1RQG5 324 aaPredicted RBP11.32□□□□□ -0.6
CD48-202ENST00000368046 SMCO2A6NFE2 343 aa11.32□□□□□ -0.6
CD48-202ENST00000368046 DCDC2CA8MYV0 355 aa11.32□□□□□ -0.6
CD48-202ENST00000368046 GH1P01241 217 aa11.32□□□□□ -0.6
CD48-202ENST00000368046 IFNAR1P17181 557 aa11.32□□□□□ -0.6
CD48-202ENST00000368046 NAPAP54920 295 aa11.32□□□□□ -0.6
CD48-202ENST00000368046 CCT2P78371 535 aaKnown RBP11.32□□□□□ -0.6
CD48-202ENST00000368046 MRPS9P82933 396 aaKnown RBP11.32□□□□□ -0.6
CD48-202ENST00000368046 AKAP17AQ02040 695 aaKnown RBP11.32□□□□□ -0.6
CD48-202ENST00000368046 LAMC2Q13753 1193 aa11.32□□□□□ -0.6
CD48-202ENST00000368046 PFKFB3Q16875 520 aaPredicted RBP11.32□□□□□ -0.6
CD48-202ENST00000368046 WWC2Q6AWC2 1192 aa11.32□□□□□ -0.6
CD48-202ENST00000368046 PPP1R18Q6NYC8 613 aa11.32□□□□□ -0.6
CD48-202ENST00000368046 DHX37Q8IY37 1157 aaKnown RBP11.32□□□□□ -0.6
CD48-202ENST00000368046 SLC43A3Q8NBI5 491 aa11.32□□□□□ -0.6
CD48-202ENST00000368046 GPKOWQ92917 476 aaPredicted RBP eCLIP11.32□□□□□ -0.6
CD48-202ENST00000368046 GLT8D2Q9H1C3 349 aa11.32□□□□□ -0.6
CD48-202ENST00000368046 PRO3102Q9H379 93 aa11.32□□□□□ -0.6
CD48-202ENST00000368046 PCDHA6Q9UN73 950 aa11.32□□□□□ -0.6
CD48-202ENST00000368046 PCDHA8Q9Y5H6 950 aa11.32□□□□□ -0.6
CD48-202ENST00000368046 NID2Q14112 1375 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 SPDYE3A6NKU9 549 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 SPATA31C2B4DYI2 1134 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 FOSP01100 380 aaPredicted RBP11.31□□□□□ -0.6
CD48-202ENST00000368046 MYL3P08590 195 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 SCG2P13521 617 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 ICAM3P32942 547 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 PURAQ00577 322 aaKnown RBP11.31□□□□□ -0.6
CD48-202ENST00000368046 FAAP100Q0VG06 881 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 ITGA7Q13683 1181 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 ANKRD1Q15327 319 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 PKN1Q16512 942 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 GNPTABQ3T906 1256 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 HABP4Q5JVS0 413 aaKnown RBP11.31□□□□□ -0.6
CD48-202ENST00000368046 PCNX4Q63HM2 1172 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 TYW1BQ6NUM6 668 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 IL31RAQ8NI17 732 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 EMID1Q96A84 441 aaPredicted RBP11.31□□□□□ -0.6
CD48-202ENST00000368046 RNF25Q96BH1 459 aaPredicted RBP11.31□□□□□ -0.6
CD48-202ENST00000368046 ZFP91Q96JP5 570 aaPredicted RBP11.31□□□□□ -0.6
CD48-202ENST00000368046 INPP4AQ96PE3 977 aaPredicted RBP11.31□□□□□ -0.6
CD48-202ENST00000368046 LARP6Q9BRS8 491 aaKnown RBP11.31□□□□□ -0.6
CD48-202ENST00000368046 RNF26Q9BY78 433 aaPredicted RBP11.31□□□□□ -0.6
CD48-202ENST00000368046 RIC8AQ9NPQ8 531 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 TMEM39AQ9NV64 488 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 RTEL1Q9NZ71 1219 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 FRMPD4Q14CM0 1322 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 MROH7Q68CQ1 1323 aa11.31□□□□□ -0.6
CD48-202ENST00000368046 TRIM43BA6NCK2 446 aa11.3□□□□□ -0.6
CD48-202ENST00000368046 STXBP3O00186 592 aa11.3□□□□□ -0.6
CD48-202ENST00000368046 MAFGO15525 162 aa11.3□□□□□ -0.6
CD48-202ENST00000368046 PQBP1O60828 265 aaKnown RBP11.3□□□□□ -0.6
CD48-202ENST00000368046 PPFIA4O75335 1185 aa11.3□□□□□ -0.6
CD48-202ENST00000368046 CLTBP09497 229 aa11.3□□□□□ -0.6
CD48-202ENST00000368046 MAGEA10P43363 369 aaPredicted RBP11.3□□□□□ -0.6
CD48-202ENST00000368046 SP2Q02086 613 aa11.3□□□□□ -0.6
CD48-202ENST00000368046 ARHGAP1Q07960 439 aa11.3□□□□□ -0.6
CD48-202ENST00000368046 UBE2SQ16763 222 aa11.3□□□□□ -0.6
CD48-202ENST00000368046 MYSM1Q5VVJ2 828 aa11.3□□□□□ -0.6
CD48-202ENST00000368046 CPLX2Q6PUV4 134 aaKnown RBP11.3□□□□□ -0.6
CD48-202ENST00000368046 SH3RF1Q7Z6J0 888 aa11.3□□□□□ -0.6
CD48-202ENST00000368046 ZNF687Q8N1G0 1237 aa11.3□□□□□ -0.6
CD48-202ENST00000368046 CCDC12Q8WUD4 166 aaPredicted RBP11.3□□□□□ -0.6
CD48-202ENST00000368046 AFG1LQ8WV93 481 aa11.3□□□□□ -0.6
CD48-202ENST00000368046 PHKBQ93100 1093 aa11.3□□□□□ -0.6
CD48-202ENST00000368046 TRIM43Q96BQ3 446 aaPredicted RBP11.3□□□□□ -0.6
CD48-202ENST00000368046 LBHD1Q9BQE6 289 aaPredicted RBP11.3□□□□□ -0.6
CD48-202ENST00000368046 MTG1Q9BT17 334 aaPredicted RBP11.3□□□□□ -0.6
CD48-202ENST00000368046 NCOA5Q9HCD5 579 aaKnown RBP11.3□□□□□ -0.6
CD48-202ENST00000368046 PDLIM7Q9NR12 457 aa11.3□□□□□ -0.6
CD48-202ENST00000368046 GRIN2DO15399 1336 aa11.3□□□□□ -0.6
CD48-202ENST00000368046 A0A1W2PPC1 479 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 CPLX1O14810 134 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 KIAA0355O15063 1070 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 TLR3O15455 904 aaKnown RBP11.29□□□□□ -0.6
CD48-202ENST00000368046 FIBPO43427 364 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 RAG1P15918 1043 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 GNA11P29992 359 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 ADCY7P51828 1080 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 NEK4P51957 841 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 SSRP1Q08945 709 aaKnown RBP11.29□□□□□ -0.6
CD48-202ENST00000368046 STK3Q13188 491 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 NEDD9Q14511 834 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 DGKDQ16760 1214 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 CELF3Q5SZQ8 465 aaKnown RBP11.29□□□□□ -0.6
CD48-202ENST00000368046 MCTP2Q6DN12 878 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 NLRX1Q86UT6 975 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 SENP7Q9BQF6 1050 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 SLC26A6Q9BXS9 759 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 ZMYND12Q9H0C1 365 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 EHMT1Q9H9B1 1298 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 MLXIPQ9HAP2 919 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 C6orf50Q9HD87 102 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 PRDM5Q9NQX1 630 aaPredicted RBP11.29□□□□□ -0.6
CD48-202ENST00000368046 LCTP09848 1927 aa11.29□□□□□ -0.6
CD48-202ENST00000368046 BAZ2BQ9UIF8 2168 aaKnown RBP11.28□□□□□ -0.6
CD48-202ENST00000368046 FRMPD3Q5JV73 1810 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms