RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CTR9Q6PD62 1173 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 POTEEQ6S8J3 1075 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 CYP26C1Q6V0L0 522 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 RAD9BQ6WBX8 426 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 MFSD6Q6ZSS7 791 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 RAB11FIP4Q86YS3 637 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 ANKLE1Q8NAG6 615 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 DIS3LQ8TF46 1054 aaKnown RBP12.89□□□□□ -0.35
USF1-201ENST00000368019 EPB41L4AQ9HCS5 686 aaPredicted RBP12.89□□□□□ -0.35
USF1-201ENST00000368019 TXNRD2Q9NNW7 524 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 SAMSN1Q9NSI8 373 aaKnown RBP12.89□□□□□ -0.35
USF1-201ENST00000368019 RBM28Q9NW13 759 aaKnown RBP12.89□□□□□ -0.35
USF1-201ENST00000368019 ZSWIM5Q9P217 1185 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 RBPJLQ9UBG7 517 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 TAOK2Q9UL54 1235 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 COL6A3P12111 3177 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 MYH8P13535 1937 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 A0A1W2PPC1 479 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 CTAGE15A4D2H0 777 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 USP17L10C9JJH3 530 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 PRPF3O43395 683 aaKnown RBP12.88□□□□□ -0.35
USF1-201ENST00000368019 EVI5O60447 810 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 PEX10O60683 326 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 APPP05067 770 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 CTAGE8P0CG41 777 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 XRCC5P13010 732 aaKnown RBP12.88□□□□□ -0.35
USF1-201ENST00000368019 HERVK_113P62684 666 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 DYNLL1P63167 89 aaKnown RBP12.88□□□□□ -0.35
USF1-201ENST00000368019 GOLGA8FQ08AF8 430 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 GOLGA8DPQ0D2H9 430 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 MAP9Q49MG5 647 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 LEKR1Q6ZMV7 388 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 NECAB2Q7Z6G3 386 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 CTAGE6Q86UF2 777 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 CTAGE4Q8IX94 777 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 TRIB2Q92519 343 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 USP6NLQ92738 828 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 HMX1Q9NP08 348 aaPredicted RBP12.88□□□□□ -0.35
USF1-201ENST00000368019 RMND1Q9NWS8 449 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 TMOD4Q9NZQ9 345 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 FEZ2Q9UHY8 353 aaPredicted RBP12.88□□□□□ -0.35
USF1-201ENST00000368019 RWDD2AQ9UIY3 292 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 ZBTB21Q9ULJ3 1066 aa12.88□□□□□ -0.35
USF1-201ENST00000368019 TARSL2A2RTX5 802 aaKnown RBP12.87□□□□□ -0.35
USF1-201ENST00000368019 SOWAHDA6NJG2 315 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 GSG1L2A8MUP6 293 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 PPP1R3GB7ZBB8 358 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 IDH1O75874 414 aaKnown RBP12.87□□□□□ -0.35
USF1-201ENST00000368019 GDF11O95390 407 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 CALM1P0DP23 149 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 CALM2P0DP24 149 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 CALM3P0DP25 149 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 KRT2P35908 639 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 AARSP49588 968 aaKnown RBP eCLIP12.87□□□□□ -0.35
USF1-201ENST00000368019 IRX3P78415 501 aaPredicted RBP12.87□□□□□ -0.35
USF1-201ENST00000368019 AMPD2Q01433 879 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 RBL2Q08999 1139 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 KARSQ15046 597 aaKnown RBP12.87□□□□□ -0.35
USF1-201ENST00000368019 Q3C1V9 767 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 TATDN1Q6P1N9 297 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 TRMT44Q8IYL2 757 aaKnown RBP12.87□□□□□ -0.35
USF1-201ENST00000368019 ZNF654Q8IZM8 581 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 FAM177A1Q8N128 213 aaPredicted RBP12.87□□□□□ -0.35
USF1-201ENST00000368019 FANCBQ8NB91 859 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 EHBP1Q8NDI1 1231 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 GPRC5AQ8NFJ5 357 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 NEK11Q8NG66 645 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 IQCDQ96DY2 449 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 PAGE5Q96GU1 130 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 CSRNP2Q9H175 543 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 HAUS4Q9H6D7 363 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 SENP2Q9HC62 589 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 BRMS1Q9HCU9 246 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 EMILIN3Q9NT22 766 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 OGDHLQ9ULD0 1010 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 PCDHB6Q9Y5E3 794 aa12.87□□□□□ -0.35
USF1-201ENST00000368019 FRMPD3Q5JV73 1810 aa12.86□□□□□ -0.35
USF1-201ENST00000368019 A0A1W2PQC6 194 aa12.86□□□□□ -0.35
USF1-201ENST00000368019 H3BQF6 201 aa12.86□□□□□ -0.35
USF1-201ENST00000368019 GTPBP6O43824 516 aaPredicted RBP12.86□□□□□ -0.35
USF1-201ENST00000368019 GYPCP04921 128 aa12.86□□□□□ -0.35
USF1-201ENST00000368019 MYL1P05976 194 aa12.86□□□□□ -0.35
USF1-201ENST00000368019 CYP2B6P20813 491 aa12.86□□□□□ -0.35
USF1-201ENST00000368019 CYP7A1P22680 504 aa12.86□□□□□ -0.35
USF1-201ENST00000368019 CKAP4Q07065 602 aaKnown RBP12.86□□□□□ -0.35
USF1-201ENST00000368019 ZNF569Q5MCW4 686 aa12.86□□□□□ -0.35
USF1-201ENST00000368019 SRLQ86TD4 932 aa12.86□□□□□ -0.35
USF1-201ENST00000368019 DESI2Q9BSY9 194 aa12.86□□□□□ -0.35
USF1-201ENST00000368019 PHF20Q9BVI0 1012 aa12.86□□□□□ -0.35
USF1-201ENST00000368019 RASSF4Q9H2L5 321 aa12.86□□□□□ -0.35
USF1-201ENST00000368019 ABHD10Q9NUJ1 306 aa12.86□□□□□ -0.35
USF1-201ENST00000368019 SAP30BPQ9UHR5 308 aaKnown RBP12.86□□□□□ -0.35
USF1-201ENST00000368019 TEX33O43247 280 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 HLA-DOAP06340 250 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 RXRAP19793 462 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 MAPK4P31152 587 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 BMP8BP34820 402 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 ARHGAP25P42331 645 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 COPB1P53618 953 aaKnown RBP12.85□□□□□ -0.35
USF1-201ENST00000368019 ERVK-9P63128 1117 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms