RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 KCNMB3Q9NPA1 279 aa10.76□□□□□ -0.69
VTA1-201ENST00000367621 DDX25Q9UHL0 483 aaKnown RBP10.76□□□□□ -0.69
VTA1-201ENST00000367621 KCNH3Q9ULD8 1083 aa10.76□□□□□ -0.69
VTA1-201ENST00000367621 IGLV3-22A0A075B6J6 115 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 SPDYE3A6NKU9 549 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 PP2D1A8MPX8 630 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 ACTN4O43707 911 aaKnown RBP10.75□□□□□ -0.69
VTA1-201ENST00000367621 GCFC2P16383 781 aaKnown RBP10.75□□□□□ -0.69
VTA1-201ENST00000367621 LONP1P36776 959 aaKnown RBP10.75□□□□□ -0.69
VTA1-201ENST00000367621 SYKP43405 635 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 HERVK_113P62684 666 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 RPS6P62753 249 aaKnown RBP10.75□□□□□ -0.69
VTA1-201ENST00000367621 MDM2Q00987 491 aaPredicted RBP10.75□□□□□ -0.69
VTA1-201ENST00000367621 LONRF3Q496Y0 759 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 Q4G0T1 1027 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 TJAP1Q5JTD0 557 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 SLC30A10Q6XR72 485 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 DTHD1Q6ZMT9 781 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 MB21D1Q8N884 522 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 IGSF22Q8N9C0 903 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 ETNPPLQ8TBG4 499 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 LRRC15Q8TF66 581 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 DDX12PQ92771 950 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 GJA10Q969M2 543 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 TIGD1Q96MW7 591 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 TAAR1Q96RJ0 339 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 TEX13BQ9BXU2 312 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 TXNRD2Q9NNW7 524 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 HOMER2Q9NSB8 354 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 RNF146Q9NTX7 359 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 MAP3K20Q9NYL2 800 aaKnown RBP10.75□□□□□ -0.69
VTA1-201ENST00000367621 RBPJLQ9UBG7 517 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 FRMPD4Q14CM0 1322 aa10.75□□□□□ -0.69
VTA1-201ENST00000367621 BTBD19C9JJ37 291 aa10.74□□□□□ -0.69
VTA1-201ENST00000367621 LCE2BO14633 110 aa10.74□□□□□ -0.69
VTA1-201ENST00000367621 LETM1O95202 739 aaPredicted RBP10.74□□□□□ -0.69
VTA1-201ENST00000367621 CDC25AP30304 524 aa10.74□□□□□ -0.69
VTA1-201ENST00000367621 GTF2A2P52657 109 aa10.74□□□□□ -0.69
VTA1-201ENST00000367621 BAATQ14032 418 aaPredicted RBP10.74□□□□□ -0.69
VTA1-201ENST00000367621 CALCRLQ16602 461 aa10.74□□□□□ -0.69
VTA1-201ENST00000367621 Q3C1V9 767 aa10.74□□□□□ -0.69
VTA1-201ENST00000367621 LRSAM1Q6UWE0 723 aa10.74□□□□□ -0.69
VTA1-201ENST00000367621 KRBA2Q6ZNG9 492 aa10.74□□□□□ -0.69
VTA1-201ENST00000367621 RIOX2Q8IUF8 465 aa10.74□□□□□ -0.69
VTA1-201ENST00000367621 ELOA2Q8IYF1 753 aaPredicted RBP10.74□□□□□ -0.69
VTA1-201ENST00000367621 IL31RAQ8NI17 732 aa10.74□□□□□ -0.69
VTA1-201ENST00000367621 PURBQ96QR8 312 aaKnown RBP10.74□□□□□ -0.69
VTA1-201ENST00000367621 NAP1L4Q99733 375 aaKnown RBP10.74□□□□□ -0.69
VTA1-201ENST00000367621 PTPN18Q99952 460 aa10.74□□□□□ -0.69
VTA1-201ENST00000367621 MMTAG2Q9BU76 263 aaKnown RBP10.74□□□□□ -0.69
VTA1-201ENST00000367621 PANK2Q9BZ23 570 aa10.74□□□□□ -0.69
VTA1-201ENST00000367621 MAF1Q9H063 256 aa10.74□□□□□ -0.69
VTA1-201ENST00000367621 SLC45A1Q9Y2W3 748 aa10.74□□□□□ -0.69
VTA1-201ENST00000367621 CTDP1Q9Y5B0 961 aaPredicted RBP10.74□□□□□ -0.69
VTA1-201ENST00000367621 LOC285556D6RIA3 1793 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 MEIS1O00470 390 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 FOXN1O15353 648 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 POLR2DO15514 142 aaKnown RBP10.73□□□□□ -0.69
VTA1-201ENST00000367621 GFRA3O60609 400 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 KINO60870 393 aaKnown RBP10.73□□□□□ -0.69
VTA1-201ENST00000367621 ZBTB48P10074 688 aaPredicted RBP10.73□□□□□ -0.69
VTA1-201ENST00000367621 CETPP11597 493 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 HUNKP57058 714 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 UBXN2AP68543 259 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 IRX3P78415 501 aaPredicted RBP10.73□□□□□ -0.69
VTA1-201ENST00000367621 SPIRE1Q08AE8 756 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 PDIA5Q14554 519 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 TRAF7Q6Q0C0 670 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 RNF207Q6ZRF8 634 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 SH3RF1Q7Z6J0 888 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 ANKRD23Q86SG2 305 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 SAPCD2Q86UD0 394 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 RASAL3Q86YV0 1011 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 CKAP2LQ8IYA6 745 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 CHST13Q8NET6 341 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 MOV10L1Q9BXT6 1211 aaKnown RBP10.73□□□□□ -0.69
VTA1-201ENST00000367621 CCSER1Q9C0I3 900 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 SPATC1LQ9H0A9 340 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 TNMDQ9H2S6 317 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 A1CFQ9NQ94 594 aaKnown RBP10.73□□□□□ -0.69
VTA1-201ENST00000367621 FAM13BQ9NYF5 915 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 CYP39A1Q9NYL5 469 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 SERTAD1Q9UHV2 236 aa10.73□□□□□ -0.69
VTA1-201ENST00000367621 CCL15-CCL14A0A0B4J2E2 113 aa10.72□□□□□ -0.69
VTA1-201ENST00000367621 TBX3O15119 743 aa10.72□□□□□ -0.69
VTA1-201ENST00000367621 CTAGE5O15320 804 aa10.72□□□□□ -0.69
VTA1-201ENST00000367621 MSH4O15457 936 aa10.72□□□□□ -0.69
VTA1-201ENST00000367621 ZMYND10O75800 440 aa10.72□□□□□ -0.69
VTA1-201ENST00000367621 CYP2C8P10632 490 aa10.72□□□□□ -0.69
VTA1-201ENST00000367621 ITGB5P18084 799 aa10.72□□□□□ -0.69
VTA1-201ENST00000367621 OSBPP22059 807 aa10.72□□□□□ -0.69
VTA1-201ENST00000367621 TECP42680 631 aa10.72□□□□□ -0.69
VTA1-201ENST00000367621 TXKP42681 527 aa10.72□□□□□ -0.69
VTA1-201ENST00000367621 MRPS9P82933 396 aaKnown RBP10.72□□□□□ -0.69
VTA1-201ENST00000367621 PABPC4Q13310 644 aaKnown RBP eCLIP10.72□□□□□ -0.69
VTA1-201ENST00000367621 CCL15Q16663 113 aa10.72□□□□□ -0.69
VTA1-201ENST00000367621 PRR16Q569H4 304 aa10.72□□□□□ -0.69
VTA1-201ENST00000367621 NAALADL2Q58DX5 795 aa10.72□□□□□ -0.69
VTA1-201ENST00000367621 PDXDC2PQ6P474 469 aa10.72□□□□□ -0.69
VTA1-201ENST00000367621 NSMFQ6X4W1 530 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms