RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 MRPL12P52815 198 aaKnown RBP16.84■□□□□ 0.29
SF3B5-201ENST00000367569 ANAPC15P60006 121 aa16.84■□□□□ 0.29
SF3B5-201ENST00000367569 NTRK3Q16288 839 aa16.84■□□□□ 0.29
SF3B5-201ENST00000367569 TMEM199Q8N511 208 aa16.84■□□□□ 0.29
SF3B5-201ENST00000367569 RTEL1Q9NZ71 1219 aa16.84■□□□□ 0.29
SF3B5-201ENST00000367569 MRVI1Q9Y6F6 885 aa16.84■□□□□ 0.29
SF3B5-201ENST00000367569 FRMPD4Q14CM0 1322 aa16.84■□□□□ 0.29
SF3B5-201ENST00000367569 TMEM265A0A087WTH1 108 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 LOC102724159A0A0B4J2E5 919 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 CCDC196A0A1B0GTZ2 297 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 ZEB2O60315 1214 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 SCG2P13521 617 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 DNAJB2P25686 324 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 CHMP4BP1P59074 171 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 MRPS9P82933 396 aaKnown RBP16.83■□□□□ 0.28
SF3B5-201ENST00000367569 TTLL4Q14679 1199 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 PWP2Q15269 919 aaKnown RBP16.83■□□□□ 0.28
SF3B5-201ENST00000367569 PKN1Q16512 942 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 PFKFB3Q16875 520 aaPredicted RBP16.83■□□□□ 0.28
SF3B5-201ENST00000367569 UMODL1Q5DID0 1318 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 RASIP1Q5U651 963 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 ZNF365Q70YC5 407 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 FBXL16Q8N461 479 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 NECAB1Q8N987 351 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 AIFM3Q96NN9 605 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 IWS1Q96ST2 819 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 PKD2L1Q9P0L9 805 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 VPS54Q9P1Q0 977 aa16.83■□□□□ 0.28
SF3B5-201ENST00000367569 PRUNE2Q8WUY3 3088 aa16.82■□□□□ 0.28
SF3B5-201ENST00000367569 GRXCR1A8MXD5 290 aa16.82■□□□□ 0.28
SF3B5-201ENST00000367569 NEK4P51957 841 aa16.82■□□□□ 0.28
SF3B5-201ENST00000367569 EVCP57679 992 aa16.82■□□□□ 0.28
SF3B5-201ENST00000367569 ARHGAP1Q07960 439 aa16.82■□□□□ 0.28
SF3B5-201ENST00000367569 SCRN1Q12765 414 aa16.82■□□□□ 0.28
SF3B5-201ENST00000367569 GRIN2CQ14957 1233 aa16.82■□□□□ 0.28
SF3B5-201ENST00000367569 MAFAQ8NHW3 353 aaPredicted RBP16.82■□□□□ 0.28
SF3B5-201ENST00000367569 RASGRP4Q8TDF6 673 aa16.82■□□□□ 0.28
SF3B5-201ENST00000367569 TRPV6Q9H1D0 765 aa16.82■□□□□ 0.28
SF3B5-201ENST00000367569 BCAS3Q9H6U6 928 aa16.82■□□□□ 0.28
SF3B5-201ENST00000367569 BARHL2Q9NY43 387 aa16.82■□□□□ 0.28
SF3B5-201ENST00000367569 MYO9BQ13459 2157 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 SMCO2A6NFE2 343 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 SPDYE3A6NKU9 549 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 PIK3CDO00329 1044 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 CPLX1O14810 134 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 B4GALT4O60513 344 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 EIF3JO75822 258 aaKnown RBP16.81■□□□□ 0.28
SF3B5-201ENST00000367569 FOSL2P15408 326 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 UBA1P22314 1058 aaKnown RBP16.81■□□□□ 0.28
SF3B5-201ENST00000367569 FOSBP53539 338 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 AKAP17AQ02040 695 aaKnown RBP16.81■□□□□ 0.28
SF3B5-201ENST00000367569 JAKMIP3Q5VZ66 844 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 PPP1R18Q6NYC8 613 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 CCDC62Q6P9F0 684 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 PSRC1Q6PGN9 363 aaPredicted RBP16.81■□□□□ 0.28
SF3B5-201ENST00000367569 AFG1LQ8WV93 481 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 COL25A1Q9BXS0 654 aaPredicted RBP16.81■□□□□ 0.28
SF3B5-201ENST00000367569 HIPK3Q9H422 1215 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 IL23AQ9NPF7 189 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 RIC8AQ9NPQ8 531 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 MAP3K20Q9NYL2 800 aaKnown RBP16.81■□□□□ 0.28
SF3B5-201ENST00000367569 PCDHA6Q9UN73 950 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 TELO2Q9Y4R8 837 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 PCDHA8Q9Y5H6 950 aa16.81■□□□□ 0.28
SF3B5-201ENST00000367569 SPTBN5Q9NRC6 3674 aaKnown RBP16.81■□□□□ 0.28
SF3B5-201ENST00000367569 SCN10AQ9Y5Y9 1956 aa16.8■□□□□ 0.28
SF3B5-201ENST00000367569 RBAK-RBAKDNI3L0D1 243 aa16.8■□□□□ 0.28
SF3B5-201ENST00000367569 PRPF3O43395 683 aaKnown RBP16.8■□□□□ 0.28
SF3B5-201ENST00000367569 GH1P01241 217 aa16.8■□□□□ 0.28
SF3B5-201ENST00000367569 IFNAR1P17181 557 aa16.8■□□□□ 0.28
SF3B5-201ENST00000367569 PBX2P40425 430 aa16.8■□□□□ 0.28
SF3B5-201ENST00000367569 SP4Q02446 784 aa16.8■□□□□ 0.28
SF3B5-201ENST00000367569 SEMA3FQ13275 785 aa16.8■□□□□ 0.28
SF3B5-201ENST00000367569 VSIG10LQ86VR7 867 aa16.8■□□□□ 0.28
SF3B5-201ENST00000367569 TIFAQ96CG3 184 aa16.8■□□□□ 0.28
SF3B5-201ENST00000367569 ZNF274Q96GC6 653 aaPredicted RBP16.8■□□□□ 0.28
SF3B5-201ENST00000367569 NOC4LQ9BVI4 516 aaKnown RBP16.8■□□□□ 0.28
SF3B5-201ENST00000367569 RNF26Q9BY78 433 aaPredicted RBP16.8■□□□□ 0.28
SF3B5-201ENST00000367569 SEZ6LQ9BYH1 1024 aa16.8■□□□□ 0.28
SF3B5-201ENST00000367569 ANO3Q9BYT9 981 aa16.8■□□□□ 0.28
SF3B5-201ENST00000367569 PBX4Q9BYU1 374 aa16.8■□□□□ 0.28
SF3B5-201ENST00000367569 MAF1Q9H063 256 aa16.8■□□□□ 0.28
SF3B5-201ENST00000367569 SLKQ9H2G2 1235 aaPredicted RBP16.8■□□□□ 0.28
SF3B5-201ENST00000367569 ZNF576Q9H609 170 aa16.8■□□□□ 0.28
SF3B5-201ENST00000367569 DDX41Q9UJV9 622 aaKnown RBP16.8■□□□□ 0.28
SF3B5-201ENST00000367569 GGPS1O95749 300 aa16.79■□□□□ 0.28
SF3B5-201ENST00000367569 MMP3P08254 477 aa16.79■□□□□ 0.28
SF3B5-201ENST00000367569 ZNF286BP0CG31 522 aa16.79■□□□□ 0.28
SF3B5-201ENST00000367569 CCL23P55773 120 aa16.79■□□□□ 0.28
SF3B5-201ENST00000367569 PURAQ00577 322 aaKnown RBP16.79■□□□□ 0.28
SF3B5-201ENST00000367569 SP2Q02086 613 aa16.79■□□□□ 0.28
SF3B5-201ENST00000367569 ME3Q16798 604 aa16.79■□□□□ 0.28
SF3B5-201ENST00000367569 SAMD3Q8N6K7 520 aa16.79■□□□□ 0.28
SF3B5-201ENST00000367569 UIMC1Q96RL1 719 aa16.79■□□□□ 0.28
SF3B5-201ENST00000367569 C22orf23Q9BZE7 217 aa16.79■□□□□ 0.28
SF3B5-201ENST00000367569 WNT8AQ9H1J5 351 aa16.79■□□□□ 0.28
SF3B5-201ENST00000367569 ALDH8A1Q9H2A2 487 aaPredicted RBP16.79■□□□□ 0.28
SF3B5-201ENST00000367569 POLR3EQ9NVU0 708 aa16.79■□□□□ 0.28
SF3B5-201ENST00000367569 CXXC1Q9P0U4 656 aaPredicted RBP16.79■□□□□ 0.28
SF3B5-201ENST00000367569 hCG_1984214I3L0E3 225 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms